Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm26089-201ENSMUST00000157898 107 ntBASIC1.74□□□□□ -2.13
Hoxd3P09027 Mir497-201ENSMUST00000200557 84 ntBASIC1.74□□□□□ -2.13
Hoxd3P09027 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.74□□□□□ -2.13
Hoxd3P09027 AC157278.1-201ENSMUST00000221621 148 ntBASIC1.74□□□□□ -2.13
Hoxd3P09027 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.74□□□□□ -2.13
Hoxd3P09027 Snord45b-201ENSMUST00000082797 71 ntBASIC1.74□□□□□ -2.13
Hoxd3P09027 Gm25094-201ENSMUST00000103992 131 ntBASIC1.73□□□□□ -2.13
Hoxd3P09027 Gm24983-201ENSMUST00000104457 69 ntBASIC1.73□□□□□ -2.13
Hoxd3P09027 Gm22947-201ENSMUST00000158559 91 ntBASIC1.73□□□□□ -2.13
Hoxd3P09027 Gm22203-201ENSMUST00000158605 58 ntBASIC1.73□□□□□ -2.13
Hoxd3P09027 Gm22929-201ENSMUST00000175517 107 ntBASIC1.73□□□□□ -2.13
Hoxd3P09027 Gm43907-201ENSMUST00000203128 117 ntBASIC1.73□□□□□ -2.13
Hoxd3P09027 Snord1a-201ENSMUST00000083160 74 ntBASIC1.73□□□□□ -2.13
Hoxd3P09027 Gm23950-201ENSMUST00000104026 129 ntBASIC1.72□□□□□ -2.13
Hoxd3P09027 Gm22030-201ENSMUST00000116942 63 ntBASIC1.72□□□□□ -2.13
Hoxd3P09027 Gm25663-201ENSMUST00000157698 135 ntBASIC1.72□□□□□ -2.13
Hoxd3P09027 Gm22406-201ENSMUST00000174923 93 ntBASIC1.72□□□□□ -2.13
Hoxd3P09027 Gm24154-201ENSMUST00000175261 130 ntBASIC1.72□□□□□ -2.13
Hoxd3P09027 Gm27549-201ENSMUST00000183508 62 ntBASIC1.72□□□□□ -2.13
Hoxd3P09027 Mir7232-201ENSMUST00000197929 74 ntBASIC1.72□□□□□ -2.13
Hoxd3P09027 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.72□□□□□ -2.13
Hoxd3P09027 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Hoxd3P09027 Gm25658-201ENSMUST00000158472 128 ntBASIC1.71□□□□□ -2.14
Hoxd3P09027 Gm23419-201ENSMUST00000175523 84 ntBASIC1.71□□□□□ -2.14
Hoxd3P09027 Mir7675-201ENSMUST00000184262 58 ntBASIC1.71□□□□□ -2.14
Hoxd3P09027 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.71□□□□□ -2.14
Hoxd3P09027 Mir7217-201ENSMUST00000200304 62 ntBASIC1.71□□□□□ -2.14
Hoxd3P09027 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
Hoxd3P09027 Gm22078-201ENSMUST00000157593 103 ntBASIC1.7□□□□□ -2.14
Hoxd3P09027 Gm24073-201ENSMUST00000158177 106 ntBASIC1.7□□□□□ -2.14
Hoxd3P09027 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Hoxd3P09027 Mir3069-201ENSMUST00000198802 65 ntBASIC1.7□□□□□ -2.14
Hoxd3P09027 Snora75-201ENSMUST00000082903 133 ntBASIC1.7□□□□□ -2.14
Hoxd3P09027 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
Hoxd3P09027 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.7□□□□□ -2.14
Hoxd3P09027 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Hoxd3P09027 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Hoxd3P09027 Gm6444-201ENSMUST00000119611 458 ntBASIC1.69□□□□□ -2.14
Hoxd3P09027 Mir1961-201ENSMUST00000158643 112 ntBASIC1.69□□□□□ -2.14
Hoxd3P09027 Gm27993-201ENSMUST00000184362 85 ntBASIC1.69□□□□□ -2.14
Hoxd3P09027 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.69□□□□□ -2.14
Hoxd3P09027 Gm25796-201ENSMUST00000082645 163 ntBASIC1.69□□□□□ -2.14
Hoxd3P09027 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.68□□□□□ -2.14
Hoxd3P09027 Gm22264-201ENSMUST00000178200 107 ntBASIC1.68□□□□□ -2.14
Hoxd3P09027 Mir7226-201ENSMUST00000184953 60 ntBASIC1.68□□□□□ -2.14
Hoxd3P09027 Gm25402-201ENSMUST00000082966 131 ntBASIC1.68□□□□□ -2.14
Hoxd3P09027 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Hoxd3P09027 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Hoxd3P09027 Gm25759-201ENSMUST00000103988 129 ntBASIC1.67□□□□□ -2.14
Hoxd3P09027 Gm27450-201ENSMUST00000104632 90 ntBASIC1.67□□□□□ -2.14
Hoxd3P09027 Gm26257-201ENSMUST00000122500 107 ntBASIC1.67□□□□□ -2.14
Hoxd3P09027 Gm26280-201ENSMUST00000157096 101 ntBASIC1.67□□□□□ -2.14
Hoxd3P09027 Gm25183-201ENSMUST00000157752 106 ntBASIC1.67□□□□□ -2.14
Hoxd3P09027 Gm22093-201ENSMUST00000158980 111 ntBASIC1.67□□□□□ -2.14
Hoxd3P09027 Gm25328-201ENSMUST00000175013 107 ntBASIC1.67□□□□□ -2.14
Hoxd3P09027 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.67□□□□□ -2.14
Hoxd3P09027 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.67□□□□□ -2.14
Hoxd3P09027 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Hoxd3P09027 Mir709-201ENSMUST00000102190 88 ntBASIC1.66□□□□□ -2.14
Hoxd3P09027 Gm22786-201ENSMUST00000104086 122 ntBASIC1.66□□□□□ -2.14
Hoxd3P09027 Gm24237-201ENSMUST00000157790 132 ntBASIC1.66□□□□□ -2.14
Hoxd3P09027 Gm22803-201ENSMUST00000158049 283 ntBASIC1.66□□□□□ -2.14
Hoxd3P09027 Gm26038-201ENSMUST00000158151 106 ntBASIC1.66□□□□□ -2.14
Hoxd3P09027 Gm24661-201ENSMUST00000083205 104 ntBASIC1.66□□□□□ -2.14
Hoxd3P09027 Mir322-201ENSMUST00000083484 95 ntBASIC1.66□□□□□ -2.14
Hoxd3P09027 Mir222-201ENSMUST00000083537 79 ntBASIC1.66□□□□□ -2.14
Hoxd3P09027 Gm22083-201ENSMUST00000157586 102 ntBASIC1.65□□□□□ -2.15
Hoxd3P09027 Gm25035-201ENSMUST00000175414 77 ntBASIC1.65□□□□□ -2.15
Hoxd3P09027 Gm23649-201ENSMUST00000179007 107 ntBASIC1.65□□□□□ -2.15
Hoxd3P09027 Gm25820-202ENSMUST00000197479 128 ntBASIC1.65□□□□□ -2.15
Hoxd3P09027 Gm44396-201ENSMUST00000199843 114 ntBASIC1.65□□□□□ -2.15
Hoxd3P09027 Gm45654-201ENSMUST00000210980 123 ntBASIC1.65□□□□□ -2.15
Hoxd3P09027 Gm25652-201ENSMUST00000083780 103 ntBASIC1.65□□□□□ -2.15
Hoxd3P09027 Gm22039-201ENSMUST00000157278 132 ntBASIC1.64□□□□□ -2.15
Hoxd3P09027 Gm22100-201ENSMUST00000157926 63 ntBASIC1.64□□□□□ -2.15
Hoxd3P09027 AC160976.1-201ENSMUST00000215092 148 ntBASIC1.64□□□□□ -2.15
Hoxd3P09027 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Hoxd3P09027 Gm24098-201ENSMUST00000102075 109 ntBASIC1.63□□□□□ -2.15
Hoxd3P09027 Gm25381-201ENSMUST00000102078 109 ntBASIC1.63□□□□□ -2.15
Hoxd3P09027 Gm23114-201ENSMUST00000158478 117 ntBASIC1.63□□□□□ -2.15
Hoxd3P09027 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.63□□□□□ -2.15
Hoxd3P09027 Gm18433-201ENSMUST00000192747 197 ntBASIC1.63□□□□□ -2.15
Hoxd3P09027 Gm43944-201ENSMUST00000205220 120 ntBASIC1.63□□□□□ -2.15
Hoxd3P09027 Gm23991-201ENSMUST00000117033 93 ntBASIC1.62□□□□□ -2.15
Hoxd3P09027 Gm16510-201ENSMUST00000153501 249 ntBASIC1.62□□□□□ -2.15
Hoxd3P09027 Snord2-201ENSMUST00000157899 69 ntBASIC1.62□□□□□ -2.15
Hoxd3P09027 Mir6997-201ENSMUST00000184313 71 ntBASIC1.62□□□□□ -2.15
Hoxd3P09027 Gm37579-201ENSMUST00000194291 142 ntBASIC1.62□□□□□ -2.15
Hoxd3P09027 Gm24927-201ENSMUST00000083397 107 ntBASIC1.62□□□□□ -2.15
Hoxd3P09027 Gm24494-201ENSMUST00000083804 81 ntBASIC1.62□□□□□ -2.15
Hoxd3P09027 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Hoxd3P09027 Mir223-201ENSMUST00000102112 110 ntBASIC1.61□□□□□ -2.15
Hoxd3P09027 Gm23469-201ENSMUST00000157131 104 ntBASIC1.61□□□□□ -2.15
Hoxd3P09027 Gm23500-201ENSMUST00000157735 98 ntBASIC1.61□□□□□ -2.15
Hoxd3P09027 Mir1933-201ENSMUST00000158930 88 ntBASIC1.61□□□□□ -2.15
Hoxd3P09027 Mir3108-201ENSMUST00000175500 79 ntBASIC1.61□□□□□ -2.15
Hoxd3P09027 Gm24201-201ENSMUST00000082946 125 ntBASIC1.61□□□□□ -2.15
Hoxd3P09027 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
Hoxd3P09027 Gm24580-201ENSMUST00000103965 131 ntBASIC1.6□□□□□ -2.15
Hoxd3P09027 Gm23336-201ENSMUST00000117023 123 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 157.4 ms