Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Mir883a-201ENSMUST00000104824 76 ntBASIC-1.19□□□□□ -2.6
Ubr4A2AN08 Gm23536-201ENSMUST00000157541 134 ntBASIC-1.19□□□□□ -2.6
Ubr4A2AN08 AC156790.3-201ENSMUST00000226200 254 ntBASIC-1.19□□□□□ -2.6
Ubr4A2AN08 Gm6897-201ENSMUST00000117714 138 ntBASIC-1.19□□□□□ -2.6
Ubr4A2AN08 Gm14758-201ENSMUST00000119104 138 ntBASIC-1.19□□□□□ -2.6
Ubr4A2AN08 Gm44232-201ENSMUST00000204537 225 ntBASIC-1.19□□□□□ -2.6
Ubr4A2AN08 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.19□□□□□ -2.6
Ubr4A2AN08 Gm24686-201ENSMUST00000157755 93 ntBASIC-1.19□□□□□ -2.6
Ubr4A2AN08 Gm24502-201ENSMUST00000158453 105 ntBASIC-1.19□□□□□ -2.6
Ubr4A2AN08 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.19□□□□□ -2.6
Ubr4A2AN08 Gm23214-201ENSMUST00000122716 157 ntBASIC-1.19□□□□□ -2.6
Ubr4A2AN08 Mir21c-201ENSMUST00000184910 78 ntBASIC-1.19□□□□□ -2.6
Ubr4A2AN08 AC116589.4-201ENSMUST00000222390 216 ntBASIC-1.19□□□□□ -2.6
Ubr4A2AN08 Mir465b-1-201ENSMUST00000103940 79 ntBASIC-1.2□□□□□ -2.6
Ubr4A2AN08 Mir465b-2-201ENSMUST00000104662 79 ntBASIC-1.2□□□□□ -2.6
Ubr4A2AN08 Mir190b-201ENSMUST00000104803 80 ntBASIC-1.2□□□□□ -2.6
Ubr4A2AN08 Gm22113-201ENSMUST00000158343 104 ntBASIC-1.2□□□□□ -2.6
Ubr4A2AN08 Gm27446-201ENSMUST00000183963 89 ntBASIC-1.2□□□□□ -2.6
Ubr4A2AN08 Gm22079-201ENSMUST00000157592 106 ntBASIC-1.2□□□□□ -2.6
Ubr4A2AN08 Gm23543-201ENSMUST00000158207 106 ntBASIC-1.2□□□□□ -2.6
Ubr4A2AN08 Gm25937-201ENSMUST00000083912 107 ntBASIC-1.2□□□□□ -2.6
Ubr4A2AN08 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC-1.2□□□□□ -2.6
Ubr4A2AN08 Gm23640-201ENSMUST00000157860 104 ntBASIC-1.21□□□□□ -2.6
Ubr4A2AN08 Gm23571-201ENSMUST00000180073 127 ntBASIC-1.21□□□□□ -2.6
Ubr4A2AN08 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC-1.21□□□□□ -2.6
Ubr4A2AN08 Gm25143-201ENSMUST00000082696 109 ntBASIC-1.21□□□□□ -2.6
Ubr4A2AN08 Mir421-201ENSMUST00000083575 76 ntBASIC-1.21□□□□□ -2.6
Ubr4A2AN08 Mir741-201ENSMUST00000103931 71 ntBASIC-1.21□□□□□ -2.6
Ubr4A2AN08 Mir691-201ENSMUST00000199719 78 ntBASIC-1.21□□□□□ -2.6
Ubr4A2AN08 Snord100-201ENSMUST00000116836 74 ntBASIC-1.22□□□□□ -2.6
Ubr4A2AN08 Gm26000-201ENSMUST00000157991 107 ntBASIC-1.22□□□□□ -2.6
Ubr4A2AN08 Gm24070-201ENSMUST00000104519 130 ntBASIC-1.22□□□□□ -2.61
Ubr4A2AN08 Gm24440-201ENSMUST00000157236 63 ntBASIC-1.22□□□□□ -2.61
Ubr4A2AN08 Gm24512-201ENSMUST00000174963 65 ntBASIC-1.22□□□□□ -2.61
Ubr4A2AN08 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC-1.22□□□□□ -2.61
Ubr4A2AN08 Gm12924-201ENSMUST00000121747 318 ntBASIC-1.22□□□□□ -2.61
Ubr4A2AN08 Gm23955-201ENSMUST00000157214 100 ntBASIC-1.22□□□□□ -2.61
Ubr4A2AN08 Gm22166-201ENSMUST00000178419 121 ntBASIC-1.22□□□□□ -2.61
Ubr4A2AN08 Gm23288-201ENSMUST00000179213 121 ntBASIC-1.22□□□□□ -2.61
Ubr4A2AN08 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.22□□□□□ -2.61
Ubr4A2AN08 Snora2b-201ENSMUST00000084005 137 ntBASIC-1.23□□□□□ -2.61
Ubr4A2AN08 Gm24646-201ENSMUST00000157109 99 ntBASIC-1.23□□□□□ -2.61
Ubr4A2AN08 Mir466q-201ENSMUST00000175249 76 ntBASIC-1.23□□□□□ -2.61
Ubr4A2AN08 Gm27964-201ENSMUST00000185195 62 ntBASIC-1.23□□□□□ -2.61
Ubr4A2AN08 Gm27263-201ENSMUST00000184760 76 ntBASIC-1.23□□□□□ -2.61
Ubr4A2AN08 Gm22597-201ENSMUST00000157602 80 ntBASIC-1.24□□□□□ -2.61
Ubr4A2AN08 Gm25618-201ENSMUST00000179484 107 ntBASIC-1.24□□□□□ -2.61
Ubr4A2AN08 AC165157.3-201ENSMUST00000220815 103 ntBASIC-1.24□□□□□ -2.61
Ubr4A2AN08 Mir669b-201ENSMUST00000102172 97 ntBASIC-1.24□□□□□ -2.61
Ubr4A2AN08 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC-1.24□□□□□ -2.61
Ubr4A2AN08 Mir7673-201ENSMUST00000184567 64 ntBASIC-1.24□□□□□ -2.61
Ubr4A2AN08 Mir181a-2-201ENSMUST00000083489 76 ntBASIC-1.24□□□□□ -2.61
Ubr4A2AN08 Mir3071-201ENSMUST00000093621 80 ntBASIC-1.24□□□□□ -2.61
Ubr4A2AN08 Mir9-2-201ENSMUST00000083490 72 ntBASIC-1.24□□□□□ -2.61
Ubr4A2AN08 Gm24382-201ENSMUST00000122698 107 ntBASIC-1.25□□□□□ -2.61
Ubr4A2AN08 Gm27937-201ENSMUST00000183605 88 ntBASIC-1.25□□□□□ -2.61
Ubr4A2AN08 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-1.25□□□□□ -2.61
Ubr4A2AN08 Gm24374-201ENSMUST00000104394 106 ntBASIC-1.25□□□□□ -2.61
Ubr4A2AN08 Atp2b4-208ENSMUST00000167348 243 ntBASIC-1.25□□□□□ -2.61
Ubr4A2AN08 Gm27490-201ENSMUST00000184754 128 ntBASIC-1.25□□□□□ -2.61
Ubr4A2AN08 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.25□□□□□ -2.61
Ubr4A2AN08 AC109214.2-201ENSMUST00000220089 358 ntBASIC-1.25□□□□□ -2.61
Ubr4A2AN08 Gm22165-201ENSMUST00000158414 103 ntBASIC-1.25□□□□□ -2.61
Ubr4A2AN08 Gm24969-201ENSMUST00000180331 79 ntBASIC-1.26□□□□□ -2.61
Ubr4A2AN08 Gm28330-201ENSMUST00000190353 171 ntBASIC-1.26□□□□□ -2.61
Ubr4A2AN08 Mir701-201ENSMUST00000102208 109 ntBASIC-1.26□□□□□ -2.61
Ubr4A2AN08 Gm24854-201ENSMUST00000158025 98 ntBASIC-1.26□□□□□ -2.61
Ubr4A2AN08 AC157602.1-201ENSMUST00000197446 105 ntBASIC-1.26□□□□□ -2.61
Ubr4A2AN08 Gm22693-201ENSMUST00000175049 442 ntBASIC-1.26□□□□□ -2.61
Ubr4A2AN08 Snora19-201ENSMUST00000082962 132 ntBASIC-1.26□□□□□ -2.61
Ubr4A2AN08 Gm23658-201ENSMUST00000083233 132 ntBASIC-1.26□□□□□ -2.61
Ubr4A2AN08 Gm14567-201ENSMUST00000117155 174 ntBASIC-1.26□□□□□ -2.61
Ubr4A2AN08 Gm23116-201ENSMUST00000158481 67 ntBASIC-1.26□□□□□ -2.61
Ubr4A2AN08 Gm29665-201ENSMUST00000191457 528 ntBASIC-1.26□□□□□ -2.61
Ubr4A2AN08 Gm5034-201ENSMUST00000199115 634 ntBASIC-1.26□□□□□ -2.61
Ubr4A2AN08 Gm25552-201ENSMUST00000158081 91 ntBASIC-1.27□□□□□ -2.61
Ubr4A2AN08 Gm22699-201ENSMUST00000175376 105 ntBASIC-1.27□□□□□ -2.61
Ubr4A2AN08 Mir6411-201ENSMUST00000183556 108 ntBASIC-1.27□□□□□ -2.61
Ubr4A2AN08 Gm24417-201ENSMUST00000178123 79 ntBASIC-1.27□□□□□ -2.61
Ubr4A2AN08 Gm24653-201ENSMUST00000178541 79 ntBASIC-1.27□□□□□ -2.61
Ubr4A2AN08 Gm25934-201ENSMUST00000178642 79 ntBASIC-1.27□□□□□ -2.61
Ubr4A2AN08 Gm25781-201ENSMUST00000122527 84 ntBASIC-1.27□□□□□ -2.61
Ubr4A2AN08 Mir5619-201ENSMUST00000176065 61 ntBASIC-1.27□□□□□ -2.61
Ubr4A2AN08 Gm22459-201ENSMUST00000082577 108 ntBASIC-1.27□□□□□ -2.61
Ubr4A2AN08 Gm24867-201ENSMUST00000104161 107 ntBASIC-1.27□□□□□ -2.61
Ubr4A2AN08 Gm27285-201ENSMUST00000183875 127 ntBASIC-1.27□□□□□ -2.61
Ubr4A2AN08 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.27□□□□□ -2.61
Ubr4A2AN08 Gm27410-201ENSMUST00000183851 115 ntBASIC-1.28□□□□□ -2.61
Ubr4A2AN08 Gm44347-201ENSMUST00000199602 108 ntBASIC-1.28□□□□□ -2.61
Ubr4A2AN08 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC-1.28□□□□□ -2.61
Ubr4A2AN08 Mir764-201ENSMUST00000103259 108 ntBASIC-1.28□□□□□ -2.61
Ubr4A2AN08 Gm23725-201ENSMUST00000177876 107 ntBASIC-1.28□□□□□ -2.61
Ubr4A2AN08 Gm28506-201ENSMUST00000189937 150 ntBASIC-1.28□□□□□ -2.61
Ubr4A2AN08 Gm24801-201ENSMUST00000178503 105 ntBASIC-1.29□□□□□ -2.62
Ubr4A2AN08 Gm23344-201ENSMUST00000083818 68 ntBASIC-1.29□□□□□ -2.62
Ubr4A2AN08 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-1.29□□□□□ -2.62
Ubr4A2AN08 Gm25873-201ENSMUST00000180317 107 ntBASIC-1.29□□□□□ -2.62
Ubr4A2AN08 Gm45402-201ENSMUST00000211796 223 ntBASIC-1.29□□□□□ -2.62
Ubr4A2AN08 AC145736.2-201ENSMUST00000216305 365 ntBASIC-1.29□□□□□ -2.62
Ubr4A2AN08 Gm26160-201ENSMUST00000158965 63 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 76,532 protein–RNA pairs in 268.4 ms