Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC-0.41□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm25366-201ENSMUST00000158845 124 ntBASIC-0.41□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm23337-201ENSMUST00000158959 118 ntBASIC-0.41□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm27332-201ENSMUST00000184893 112 ntBASIC-0.41□□□□□ -2.48
Trbv1A0A0B4J1G7 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.41□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm26156-201ENSMUST00000116999 123 ntBASIC-0.42□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm12013-201ENSMUST00000121971 155 ntBASIC-0.42□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.42□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm26097-201ENSMUST00000179642 93 ntBASIC-0.42□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm43907-201ENSMUST00000203128 117 ntBASIC-0.42□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm23504-201ENSMUST00000158988 95 ntBASIC-0.43□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.43□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm22259-201ENSMUST00000178926 107 ntBASIC-0.43□□□□□ -2.48
Trbv1A0A0B4J1G7 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.43□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm37624-201ENSMUST00000193751 219 ntBASIC-0.43□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm23900-201ENSMUST00000157569 108 ntBASIC-0.44□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm23260-201ENSMUST00000158317 172 ntBASIC-0.44□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm24054-201ENSMUST00000158619 105 ntBASIC-0.44□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm23970-201ENSMUST00000083319 107 ntBASIC-0.44□□□□□ -2.48
Trbv1A0A0B4J1G7 Mir764-201ENSMUST00000103259 108 ntBASIC-0.45□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm26133-201ENSMUST00000157363 100 ntBASIC-0.45□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.45□□□□□ -2.48
Trbv1A0A0B4J1G7 Snord2-201ENSMUST00000157899 69 ntBASIC-0.45□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm22089-201ENSMUST00000158336 102 ntBASIC-0.45□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.45□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm23461-201ENSMUST00000083265 107 ntBASIC-0.45□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.46□□□□□ -2.48
Trbv1A0A0B4J1G7 Snord90-201ENSMUST00000104568 111 ntBASIC-0.46□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.46□□□□□ -2.48
Trbv1A0A0B4J1G7 Gm37545-201ENSMUST00000186512 148 ntBASIC-0.46□□□□□ -2.48
Trbv1A0A0B4J1G7 Mir6375-201ENSMUST00000197176 95 ntBASIC-0.46□□□□□ -2.48
Trbv1A0A0B4J1G7 n-R5s96-201ENSMUST00000082574 124 ntBASIC-0.46□□□□□ -2.48
Trbv1A0A0B4J1G7 Snord67-201ENSMUST00000104033 111 ntBASIC-0.47□□□□□ -2.48
Trbv1A0A0B4J1G7 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
Trbv1A0A0B4J1G7 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.47□□□□□ -2.48
Trbv1A0A0B4J1G7 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm22373-201ENSMUST00000104584 89 ntBASIC-0.48□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm22451-201ENSMUST00000122803 151 ntBASIC-0.48□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.48□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm22139-201ENSMUST00000158747 105 ntBASIC-0.48□□□□□ -2.49
Trbv1A0A0B4J1G7 Mir1966-201ENSMUST00000158807 108 ntBASIC-0.48□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm23291-201ENSMUST00000175611 78 ntBASIC-0.48□□□□□ -2.49
Trbv1A0A0B4J1G7 Ighv15-1-201ENSMUST00000194450 276 ntBASIC-0.48□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm24461-201ENSMUST00000082735 103 ntBASIC-0.48□□□□□ -2.49
Trbv1A0A0B4J1G7 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.49□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm24648-201ENSMUST00000157111 132 ntBASIC-0.49□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm22542-201ENSMUST00000158166 95 ntBASIC-0.49□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm24131-201ENSMUST00000158539 107 ntBASIC-0.49□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.49□□□□□ -2.49
Trbv1A0A0B4J1G7 Mir669j-201ENSMUST00000179023 121 ntBASIC-0.49□□□□□ -2.49
Trbv1A0A0B4J1G7 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.49□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm22169-201ENSMUST00000083229 107 ntBASIC-0.49□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm23947-201ENSMUST00000093636 107 ntBASIC-0.49□□□□□ -2.49
Trbv1A0A0B4J1G7 Mup-ps5-201ENSMUST00000118667 99 ntBASIC-0.5□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm25055-201ENSMUST00000157369 76 ntBASIC-0.5□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm24399-201ENSMUST00000157869 74 ntBASIC-0.5□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm22606-201ENSMUST00000158290 103 ntBASIC-0.5□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm25014-201ENSMUST00000158401 103 ntBASIC-0.5□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm26091-201ENSMUST00000122704 82 ntBASIC-0.51□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm24246-201ENSMUST00000157315 132 ntBASIC-0.51□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm24718-201ENSMUST00000157521 136 ntBASIC-0.51□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.51□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.52□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm25656-201ENSMUST00000158466 66 ntBASIC-0.52□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm23209-201ENSMUST00000158667 110 ntBASIC-0.52□□□□□ -2.49
Trbv1A0A0B4J1G7 Mir466b-1-201ENSMUST00000177988 82 ntBASIC-0.52□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.53□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.53□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.53□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm24686-201ENSMUST00000157755 93 ntBASIC-0.53□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm26062-201ENSMUST00000083379 107 ntBASIC-0.53□□□□□ -2.49
Trbv1A0A0B4J1G7 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.54□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm25680-201ENSMUST00000116917 126 ntBASIC-0.54□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm22635-201ENSMUST00000116962 126 ntBASIC-0.54□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm23601-201ENSMUST00000157259 131 ntBASIC-0.54□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm22699-201ENSMUST00000175376 105 ntBASIC-0.54□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm25993-201ENSMUST00000175391 80 ntBASIC-0.54□□□□□ -2.5
Trbv1A0A0B4J1G7 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC-0.54□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm26438-201ENSMUST00000082593 107 ntBASIC-0.54□□□□□ -2.5
Trbv1A0A0B4J1G7 Mir802-201ENSMUST00000103258 97 ntBASIC-0.55□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm24649-201ENSMUST00000157106 134 ntBASIC-0.55□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.55□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm25716-201ENSMUST00000158628 104 ntBASIC-0.55□□□□□ -2.5
Trbv1A0A0B4J1G7 AC158982.2-201ENSMUST00000226283 184 ntBASIC-0.55□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm25337-201ENSMUST00000083723 104 ntBASIC-0.55□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm24913-201ENSMUST00000157286 107 ntBASIC-0.56□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm26369-201ENSMUST00000157825 100 ntBASIC-0.56□□□□□ -2.5
Trbv1A0A0B4J1G7 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.57□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm25091-201ENSMUST00000103997 71 ntBASIC-0.57□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm25367-201ENSMUST00000158846 106 ntBASIC-0.57□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.57□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm25618-201ENSMUST00000179484 107 ntBASIC-0.57□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.57□□□□□ -2.5
Trbv1A0A0B4J1G7 mt-Ts2-201ENSMUST00000082416 59 ntBASIC-0.57□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm26168-201ENSMUST00000083787 112 ntBASIC-0.57□□□□□ -2.5
Trbv1A0A0B4J1G7 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.58□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm22720-201ENSMUST00000122710 87 ntBASIC-0.58□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm25522-201ENSMUST00000158394 105 ntBASIC-0.58□□□□□ -2.5
Trbv1A0A0B4J1G7 Gm18502-201ENSMUST00000218679 199 ntBASIC-0.58□□□□□ -2.5
Trbv1A0A0B4J1G7 AC168880.2-201ENSMUST00000224488 201 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 76,532 protein–RNA pairs in 191.5 ms