Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.49□□□□□ -2.49
Trem1Q9JKE2 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.49□□□□□ -2.49
Trem1Q9JKE2 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.49□□□□□ -2.49
Trem1Q9JKE2 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.49□□□□□ -2.49
Trem1Q9JKE2 Mir302d-201ENSMUST00000083513 66 ntBASIC-0.49□□□□□ -2.49
Trem1Q9JKE2 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.5□□□□□ -2.49
Trem1Q9JKE2 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.5□□□□□ -2.49
Trem1Q9JKE2 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.51□□□□□ -2.49
Trem1Q9JKE2 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.51□□□□□ -2.49
Trem1Q9JKE2 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.51□□□□□ -2.49
Trem1Q9JKE2 AC124739.2-201ENSMUST00000222201 109 ntBASIC-0.51□□□□□ -2.49
Trem1Q9JKE2 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.51□□□□□ -2.49
Trem1Q9JKE2 Gm25135-201ENSMUST00000082648 143 ntBASIC-0.51□□□□□ -2.49
Trem1Q9JKE2 Gm23347-201ENSMUST00000083823 82 ntBASIC-0.51□□□□□ -2.49
Trem1Q9JKE2 Gm25654-201ENSMUST00000158467 88 ntBASIC-0.52□□□□□ -2.49
Trem1Q9JKE2 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.52□□□□□ -2.49
Trem1Q9JKE2 Gm27792-201ENSMUST00000184031 115 ntBASIC-0.52□□□□□ -2.49
Trem1Q9JKE2 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.52□□□□□ -2.49
Trem1Q9JKE2 AL606472.1-201ENSMUST00000224628 275 ntBASIC-0.52□□□□□ -2.49
Trem1Q9JKE2 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.52□□□□□ -2.49
Trem1Q9JKE2 Gm23012-201ENSMUST00000104149 83 ntBASIC-0.53□□□□□ -2.49
Trem1Q9JKE2 Gm13339-201ENSMUST00000120651 510 ntBASIC-0.53□□□□□ -2.49
Trem1Q9JKE2 Gm25749-201ENSMUST00000175485 111 ntBASIC-0.53□□□□□ -2.49
Trem1Q9JKE2 AC109214.2-201ENSMUST00000220089 358 ntBASIC-0.53□□□□□ -2.49
Trem1Q9JKE2 mt-Ta-201ENSMUST00000082398 69 ntBASIC-0.53□□□□□ -2.49
Trem1Q9JKE2 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Gm22148-201ENSMUST00000104445 107 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Gm25184-201ENSMUST00000157753 163 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Gm23545-201ENSMUST00000158205 104 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Gm25366-201ENSMUST00000158845 124 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Gm22476-201ENSMUST00000158902 100 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Snord61-201ENSMUST00000083176 71 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Gm28925-201ENSMUST00000188586 168 ntBASIC-0.55□□□□□ -2.5
Trem1Q9JKE2 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
Trem1Q9JKE2 Gm44489-201ENSMUST00000104619 97 ntBASIC-0.56□□□□□ -2.5
Trem1Q9JKE2 Gm24724-201ENSMUST00000158230 107 ntBASIC-0.56□□□□□ -2.5
Trem1Q9JKE2 Snora15-201ENSMUST00000177461 131 ntBASIC-0.56□□□□□ -2.5
Trem1Q9JKE2 Gm23141-201ENSMUST00000178682 94 ntBASIC-0.56□□□□□ -2.5
Trem1Q9JKE2 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.56□□□□□ -2.5
Trem1Q9JKE2 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.56□□□□□ -2.5
Trem1Q9JKE2 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.57□□□□□ -2.5
Trem1Q9JKE2 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.57□□□□□ -2.5
Trem1Q9JKE2 n-R5s96-201ENSMUST00000082574 124 ntBASIC-0.57□□□□□ -2.5
Trem1Q9JKE2 Mir488-201ENSMUST00000093595 109 ntBASIC-0.57□□□□□ -2.5
Trem1Q9JKE2 Gm24232-201ENSMUST00000104314 132 ntBASIC-0.58□□□□□ -2.5
Trem1Q9JKE2 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.58□□□□□ -2.5
Trem1Q9JKE2 Gm25390-201ENSMUST00000157341 103 ntBASIC-0.58□□□□□ -2.5
Trem1Q9JKE2 AC154245.1-201ENSMUST00000224615 601 ntBASIC-0.58□□□□□ -2.5
Trem1Q9JKE2 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.59□□□□□ -2.5
Trem1Q9JKE2 Gm24132-201ENSMUST00000104745 91 ntBASIC-0.59□□□□□ -2.5
Trem1Q9JKE2 Mir1a-2-201ENSMUST00000198520 72 ntBASIC-0.59□□□□□ -2.5
Trem1Q9JKE2 Gm44490-201ENSMUST00000198566 127 ntBASIC-0.59□□□□□ -2.5
Trem1Q9JKE2 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC-0.59□□□□□ -2.5
Trem1Q9JKE2 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.6□□□□□ -2.51
Trem1Q9JKE2 Gm43907-201ENSMUST00000203128 117 ntBASIC-0.6□□□□□ -2.51
Trem1Q9JKE2 Gm23987-201ENSMUST00000117039 129 ntBASIC-0.61□□□□□ -2.51
Trem1Q9JKE2 Snord2-201ENSMUST00000157899 69 ntBASIC-0.61□□□□□ -2.51
Trem1Q9JKE2 Gm25834-201ENSMUST00000158916 101 ntBASIC-0.61□□□□□ -2.51
Trem1Q9JKE2 Gm27803-201ENSMUST00000183763 119 ntBASIC-0.61□□□□□ -2.51
Trem1Q9JKE2 Mir141-201ENSMUST00000083540 72 ntBASIC-0.61□□□□□ -2.51
Trem1Q9JKE2 Mir764-201ENSMUST00000103259 108 ntBASIC-0.62□□□□□ -2.51
Trem1Q9JKE2 Snord67-201ENSMUST00000104033 111 ntBASIC-0.62□□□□□ -2.51
Trem1Q9JKE2 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.62□□□□□ -2.51
Trem1Q9JKE2 Gm11936-201ENSMUST00000118323 160 ntBASIC-0.62□□□□□ -2.51
Trem1Q9JKE2 Gm25985-201ENSMUST00000122677 107 ntBASIC-0.62□□□□□ -2.51
Trem1Q9JKE2 Gm22542-201ENSMUST00000158166 95 ntBASIC-0.62□□□□□ -2.51
Trem1Q9JKE2 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.62□□□□□ -2.51
Trem1Q9JKE2 Gm38295-201ENSMUST00000191951 151 ntBASIC-0.62□□□□□ -2.51
Trem1Q9JKE2 Gm24524-201ENSMUST00000082925 170 ntBASIC-0.62□□□□□ -2.51
Trem1Q9JKE2 Mir669a-7-201ENSMUST00000180364 87 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Mir669a-6-201ENSMUST00000196127 87 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Mir669a-12-201ENSMUST00000197274 87 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Mir669a-5-201ENSMUST00000197439 87 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Mir669a-10-201ENSMUST00000197745 87 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Mir669a-11-201ENSMUST00000197952 87 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Mir669a-4-201ENSMUST00000198665 87 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Mir669a-9-201ENSMUST00000200087 87 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Mir669a-8-201ENSMUST00000200268 87 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Gm23303-201ENSMUST00000082714 152 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Gm27579-201ENSMUST00000158113 63 ntBASIC-0.64□□□□□ -2.51
Trem1Q9JKE2 Traj61-201ENSMUST00000165025 72 ntBASIC-0.64□□□□□ -2.51
Trem1Q9JKE2 Mir183-201ENSMUST00000083685 70 ntBASIC-0.64□□□□□ -2.51
Trem1Q9JKE2 Mir466f-2-201ENSMUST00000104805 94 ntBASIC-0.65□□□□□ -2.51
Trem1Q9JKE2 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.65□□□□□ -2.51
Trem1Q9JKE2 Gm14001-201ENSMUST00000118847 247 ntBASIC-0.65□□□□□ -2.51
Trem1Q9JKE2 Gm14838-201ENSMUST00000118913 248 ntBASIC-0.65□□□□□ -2.51
Trem1Q9JKE2 Ighv15-1-201ENSMUST00000194450 276 ntBASIC-0.65□□□□□ -2.51
Trem1Q9JKE2 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.65□□□□□ -2.51
Trem1Q9JKE2 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.65□□□□□ -2.51
Trem1Q9JKE2 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.65□□□□□ -2.51
Trem1Q9JKE2 Gm24374-201ENSMUST00000104394 106 ntBASIC-0.66□□□□□ -2.52
Trem1Q9JKE2 Gm25055-201ENSMUST00000157369 76 ntBASIC-0.66□□□□□ -2.52
Trem1Q9JKE2 Gm25993-201ENSMUST00000175391 80 ntBASIC-0.66□□□□□ -2.52
Trem1Q9JKE2 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 326.4 ms