Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm25112-201ENSMUST00000122680 104 ntBASIC1.85□□□□□ -2.11
Trim56Q80VI1 Snord60-201ENSMUST00000082834 78 ntBASIC1.85□□□□□ -2.11
Trim56Q80VI1 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trim56Q80VI1 Gm25992-201ENSMUST00000102437 109 ntBASIC1.84□□□□□ -2.11
Trim56Q80VI1 Mir1899-201ENSMUST00000122798 96 ntBASIC1.84□□□□□ -2.11
Trim56Q80VI1 Mir7241-201ENSMUST00000184532 64 ntBASIC1.84□□□□□ -2.11
Trim56Q80VI1 Gm24494-201ENSMUST00000083804 81 ntBASIC1.84□□□□□ -2.11
Trim56Q80VI1 Mir873a-201ENSMUST00000104863 77 ntBASIC1.83□□□□□ -2.12
Trim56Q80VI1 Gm22679-201ENSMUST00000116975 100 ntBASIC1.83□□□□□ -2.12
Trim56Q80VI1 Gm14884-201ENSMUST00000120456 196 ntBASIC1.83□□□□□ -2.12
Trim56Q80VI1 Gm24076-201ENSMUST00000158179 94 ntBASIC1.83□□□□□ -2.12
Trim56Q80VI1 Gm22164-201ENSMUST00000158413 106 ntBASIC1.83□□□□□ -2.12
Trim56Q80VI1 Mir6351-201ENSMUST00000183826 99 ntBASIC1.83□□□□□ -2.12
Trim56Q80VI1 mt-Tn-201ENSMUST00000082399 71 ntBASIC1.83□□□□□ -2.12
Trim56Q80VI1 Gm22809-201ENSMUST00000082743 156 ntBASIC1.83□□□□□ -2.12
Trim56Q80VI1 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
Trim56Q80VI1 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trim56Q80VI1 Mir301b-201ENSMUST00000102333 97 ntBASIC1.82□□□□□ -2.12
Trim56Q80VI1 Gm25663-201ENSMUST00000157698 135 ntBASIC1.82□□□□□ -2.12
Trim56Q80VI1 Gm25014-201ENSMUST00000158401 103 ntBASIC1.82□□□□□ -2.12
Trim56Q80VI1 Gm25831-201ENSMUST00000158924 163 ntBASIC1.82□□□□□ -2.12
Trim56Q80VI1 Mir6237-201ENSMUST00000183808 91 ntBASIC1.82□□□□□ -2.12
Trim56Q80VI1 Gm44384-201ENSMUST00000200208 114 ntBASIC1.82□□□□□ -2.12
Trim56Q80VI1 Gm25899-201ENSMUST00000082672 141 ntBASIC1.82□□□□□ -2.12
Trim56Q80VI1 Gm23900-201ENSMUST00000157569 108 ntBASIC1.81□□□□□ -2.12
Trim56Q80VI1 Gm23558-201ENSMUST00000157823 80 ntBASIC1.81□□□□□ -2.12
Trim56Q80VI1 Gm27419-201ENSMUST00000184576 109 ntBASIC1.81□□□□□ -2.12
Trim56Q80VI1 Mir709-201ENSMUST00000102190 88 ntBASIC1.8□□□□□ -2.12
Trim56Q80VI1 Gm24379-201ENSMUST00000122695 86 ntBASIC1.8□□□□□ -2.12
Trim56Q80VI1 Gm26133-201ENSMUST00000157363 100 ntBASIC1.8□□□□□ -2.12
Trim56Q80VI1 Gm25068-201ENSMUST00000103895 110 ntBASIC1.79□□□□□ -2.12
Trim56Q80VI1 Gm26080-201ENSMUST00000104069 131 ntBASIC1.79□□□□□ -2.12
Trim56Q80VI1 Gm22785-201ENSMUST00000104087 132 ntBASIC1.79□□□□□ -2.12
Trim56Q80VI1 Gm22149-201ENSMUST00000104442 136 ntBASIC1.79□□□□□ -2.12
Trim56Q80VI1 Gm22082-201ENSMUST00000157587 161 ntBASIC1.79□□□□□ -2.12
Trim56Q80VI1 Gm22386-201ENSMUST00000158192 129 ntBASIC1.79□□□□□ -2.12
Trim56Q80VI1 Gm24222-201ENSMUST00000158834 93 ntBASIC1.79□□□□□ -2.12
Trim56Q80VI1 Gm23267-201ENSMUST00000178490 132 ntBASIC1.79□□□□□ -2.12
Trim56Q80VI1 Gm24527-201ENSMUST00000082920 107 ntBASIC1.79□□□□□ -2.12
Trim56Q80VI1 Gm24406-201ENSMUST00000083026 128 ntBASIC1.79□□□□□ -2.12
Trim56Q80VI1 Gm45265-201ENSMUST00000210852 2497 ntBASIC1.78□□□□□ -2.12
Trim56Q80VI1 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Trim56Q80VI1 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.78□□□□□ -2.12
Trim56Q80VI1 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.78□□□□□ -2.12
Trim56Q80VI1 Gm24547-201ENSMUST00000158649 149 ntBASIC1.78□□□□□ -2.12
Trim56Q80VI1 Gm27493-201ENSMUST00000184128 78 ntBASIC1.78□□□□□ -2.12
Trim56Q80VI1 Gm44948-201ENSMUST00000209050 149 ntBASIC1.78□□□□□ -2.12
Trim56Q80VI1 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.78□□□□□ -2.12
Trim56Q80VI1 Gm23881-201ENSMUST00000116872 66 ntBASIC1.77□□□□□ -2.13
Trim56Q80VI1 Gm12469-201ENSMUST00000117623 207 ntBASIC1.77□□□□□ -2.13
Trim56Q80VI1 Gm14947-201ENSMUST00000133704 303 ntBASIC1.77□□□□□ -2.13
Trim56Q80VI1 Gm24399-201ENSMUST00000157869 74 ntBASIC1.77□□□□□ -2.13
Trim56Q80VI1 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.77□□□□□ -2.13
Trim56Q80VI1 Gm23917-201ENSMUST00000175256 98 ntBASIC1.77□□□□□ -2.13
Trim56Q80VI1 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.77□□□□□ -2.13
Trim56Q80VI1 Gm20108-201ENSMUST00000219977 153 ntBASIC1.77□□□□□ -2.13
Trim56Q80VI1 Gm25901-201ENSMUST00000158494 130 ntBASIC1.76□□□□□ -2.13
Trim56Q80VI1 Mir1961-201ENSMUST00000158643 112 ntBASIC1.76□□□□□ -2.13
Trim56Q80VI1 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.76□□□□□ -2.13
Trim56Q80VI1 Gm22801-201ENSMUST00000175624 84 ntBASIC1.76□□□□□ -2.13
Trim56Q80VI1 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Trim56Q80VI1 Gm24902-201ENSMUST00000158126 123 ntBASIC1.75□□□□□ -2.13
Trim56Q80VI1 Gm22515-201ENSMUST00000158273 305 ntBASIC1.75□□□□□ -2.13
Trim56Q80VI1 Mir468-201ENSMUST00000197332 78 ntBASIC1.75□□□□□ -2.13
Trim56Q80VI1 Gm44469-201ENSMUST00000198558 79 ntBASIC1.75□□□□□ -2.13
Trim56Q80VI1 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.75□□□□□ -2.13
Trim56Q80VI1 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.75□□□□□ -2.13
Trim56Q80VI1 Gm26441-201ENSMUST00000082590 104 ntBASIC1.75□□□□□ -2.13
Trim56Q80VI1 Gm24697-201ENSMUST00000083881 107 ntBASIC1.75□□□□□ -2.13
Trim56Q80VI1 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Trim56Q80VI1 Gm24588-201ENSMUST00000116696 83 ntBASIC1.74□□□□□ -2.13
Trim56Q80VI1 Gm11694-201ENSMUST00000118637 159 ntBASIC1.74□□□□□ -2.13
Trim56Q80VI1 Gm22603-201ENSMUST00000157603 96 ntBASIC1.74□□□□□ -2.13
Trim56Q80VI1 Gm27686-201ENSMUST00000185123 91 ntBASIC1.74□□□□□ -2.13
Trim56Q80VI1 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Trim56Q80VI1 Gm22677-201ENSMUST00000116977 108 ntBASIC1.73□□□□□ -2.13
Trim56Q80VI1 Gm24677-201ENSMUST00000158755 150 ntBASIC1.73□□□□□ -2.13
Trim56Q80VI1 Gm23967-201ENSMUST00000175062 78 ntBASIC1.73□□□□□ -2.13
Trim56Q80VI1 Gm25635-201ENSMUST00000082675 131 ntBASIC1.73□□□□□ -2.13
Trim56Q80VI1 Mir324-201ENSMUST00000083600 89 ntBASIC1.73□□□□□ -2.13
Trim56Q80VI1 Gm24129-201ENSMUST00000158537 97 ntBASIC1.72□□□□□ -2.13
Trim56Q80VI1 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.72□□□□□ -2.13
Trim56Q80VI1 Snord96a-201ENSMUST00000082791 81 ntBASIC1.72□□□□□ -2.13
Trim56Q80VI1 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Trim56Q80VI1 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Trim56Q80VI1 Gm22140-201ENSMUST00000158745 120 ntBASIC1.71□□□□□ -2.14
Trim56Q80VI1 Gm10548-202ENSMUST00000165672 272 ntBASIC1.71□□□□□ -2.14
Trim56Q80VI1 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.7□□□□□ -2.14
Trim56Q80VI1 Gm45197-201ENSMUST00000205288 151 ntBASIC1.7□□□□□ -2.14
Trim56Q80VI1 Mir653-201ENSMUST00000102402 85 ntBASIC1.69□□□□□ -2.14
Trim56Q80VI1 Gm25541-201ENSMUST00000116888 126 ntBASIC1.69□□□□□ -2.14
Trim56Q80VI1 Gm26274-201ENSMUST00000157103 321 ntBASIC1.69□□□□□ -2.14
Trim56Q80VI1 Gm23122-201ENSMUST00000157645 103 ntBASIC1.69□□□□□ -2.14
Trim56Q80VI1 Gm25229-201ENSMUST00000178587 79 ntBASIC1.69□□□□□ -2.14
Trim56Q80VI1 Gm27420-201ENSMUST00000183823 79 ntBASIC1.69□□□□□ -2.14
Trim56Q80VI1 Gm27993-201ENSMUST00000184362 85 ntBASIC1.69□□□□□ -2.14
Trim56Q80VI1 Mir6390-201ENSMUST00000184405 129 ntBASIC1.69□□□□□ -2.14
Trim56Q80VI1 Gm27639-201ENSMUST00000184937 85 ntBASIC1.69□□□□□ -2.14
Trim56Q80VI1 Gm26202-201ENSMUST00000082910 65 ntBASIC1.69□□□□□ -2.14
Trim56Q80VI1 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 163.7 ms