Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm22663-201ENSMUST00000158721 102 ntBASIC1.24□□□□□ -2.21
Ddx55Q6ZPL9 Gm24221-201ENSMUST00000158833 313 ntBASIC1.24□□□□□ -2.21
Ddx55Q6ZPL9 Gm25444-201ENSMUST00000158999 113 ntBASIC1.24□□□□□ -2.21
Ddx55Q6ZPL9 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.24□□□□□ -2.21
Ddx55Q6ZPL9 Gm24311-201ENSMUST00000082570 104 ntBASIC1.24□□□□□ -2.21
Ddx55Q6ZPL9 Gm23507-201ENSMUST00000083078 107 ntBASIC1.24□□□□□ -2.21
Ddx55Q6ZPL9 Gm24410-201ENSMUST00000083433 107 ntBASIC1.24□□□□□ -2.21
Ddx55Q6ZPL9 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.24□□□□□ -2.21
Ddx55Q6ZPL9 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Ddx55Q6ZPL9 Mir1191-201ENSMUST00000116883 120 ntBASIC1.23□□□□□ -2.21
Ddx55Q6ZPL9 AC159093.2-201ENSMUST00000227881 297 ntBASIC1.23□□□□□ -2.21
Ddx55Q6ZPL9 Mir22-201ENSMUST00000083595 95 ntBASIC1.23□□□□□ -2.21
Ddx55Q6ZPL9 Gm22469-201ENSMUST00000104118 133 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm24547-201ENSMUST00000158649 149 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm24223-201ENSMUST00000158827 90 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm25098-201ENSMUST00000177580 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm23356-201ENSMUST00000177610 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm24027-201ENSMUST00000177611 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm22511-201ENSMUST00000177628 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm22630-201ENSMUST00000177781 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm23560-201ENSMUST00000177782 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm25462-201ENSMUST00000177833 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm26059-201ENSMUST00000177865 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm22255-201ENSMUST00000177933 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm25146-201ENSMUST00000177976 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm25523-201ENSMUST00000178044 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm24585-201ENSMUST00000178104 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm22627-201ENSMUST00000178127 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm22912-201ENSMUST00000178242 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm24866-201ENSMUST00000178338 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm22524-201ENSMUST00000178357 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm25710-201ENSMUST00000178367 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm23575-201ENSMUST00000178406 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm24872-201ENSMUST00000178434 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm22449-201ENSMUST00000178924 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm24702-201ENSMUST00000178965 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm24206-201ENSMUST00000179011 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm24528-201ENSMUST00000179164 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm22909-201ENSMUST00000179190 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm26334-201ENSMUST00000179403 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm25463-201ENSMUST00000179405 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm25742-201ENSMUST00000179530 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm25209-201ENSMUST00000179576 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm26392-201ENSMUST00000179661 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm25230-201ENSMUST00000179740 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm26434-201ENSMUST00000179778 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm25741-201ENSMUST00000179825 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm24759-201ENSMUST00000179827 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm24219-201ENSMUST00000179861 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Mir6390-201ENSMUST00000184405 129 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm27419-201ENSMUST00000184576 109 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm42844-201ENSMUST00000200355 112 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm43944-201ENSMUST00000205220 120 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 mt-Tf-201ENSMUST00000082387 68 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Snord60-201ENSMUST00000082834 78 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm22055-201ENSMUST00000083388 107 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm23254-201ENSMUST00000097244 79 ntBASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
Ddx55Q6ZPL9 Gm24482-201ENSMUST00000117005 93 ntBASIC1.21□□□□□ -2.22
Ddx55Q6ZPL9 Gm23991-201ENSMUST00000117033 93 ntBASIC1.21□□□□□ -2.22
Ddx55Q6ZPL9 Gm26274-201ENSMUST00000157103 321 ntBASIC1.21□□□□□ -2.22
Ddx55Q6ZPL9 Gm22485-201ENSMUST00000157990 109 ntBASIC1.21□□□□□ -2.22
Ddx55Q6ZPL9 Gm23384-201ENSMUST00000158593 103 ntBASIC1.21□□□□□ -2.22
Ddx55Q6ZPL9 Mir1933-201ENSMUST00000158930 88 ntBASIC1.21□□□□□ -2.22
Ddx55Q6ZPL9 Gm22070-201ENSMUST00000178475 107 ntBASIC1.21□□□□□ -2.22
Ddx55Q6ZPL9 Mir27b-201ENSMUST00000083541 73 ntBASIC1.21□□□□□ -2.22
Ddx55Q6ZPL9 Gm25684-201ENSMUST00000083941 107 ntBASIC1.21□□□□□ -2.22
Ddx55Q6ZPL9 Mir802-201ENSMUST00000103258 97 ntBASIC1.2□□□□□ -2.22
Ddx55Q6ZPL9 Gm24468-201ENSMUST00000104489 104 ntBASIC1.2□□□□□ -2.22
Ddx55Q6ZPL9 Mir1904-201ENSMUST00000122702 80 ntBASIC1.2□□□□□ -2.22
Ddx55Q6ZPL9 Gm26089-201ENSMUST00000157898 107 ntBASIC1.2□□□□□ -2.22
Ddx55Q6ZPL9 Gm25901-201ENSMUST00000158494 130 ntBASIC1.2□□□□□ -2.22
Ddx55Q6ZPL9 Gm22074-201ENSMUST00000158595 113 ntBASIC1.2□□□□□ -2.22
Ddx55Q6ZPL9 Gm22509-201ENSMUST00000082775 107 ntBASIC1.2□□□□□ -2.22
Ddx55Q6ZPL9 Gm26456-201ENSMUST00000082831 111 ntBASIC1.2□□□□□ -2.22
Ddx55Q6ZPL9 Gm23881-201ENSMUST00000116872 66 ntBASIC1.19□□□□□ -2.22
Ddx55Q6ZPL9 Gm22031-201ENSMUST00000116945 126 ntBASIC1.19□□□□□ -2.22
Ddx55Q6ZPL9 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.19□□□□□ -2.22
Ddx55Q6ZPL9 Gm26363-201ENSMUST00000158866 83 ntBASIC1.19□□□□□ -2.22
Ddx55Q6ZPL9 Gm26290-201ENSMUST00000158891 145 ntBASIC1.19□□□□□ -2.22
Ddx55Q6ZPL9 Gm25815-201ENSMUST00000082755 107 ntBASIC1.19□□□□□ -2.22
Ddx55Q6ZPL9 Gm26054-201ENSMUST00000083037 107 ntBASIC1.19□□□□□ -2.22
Ddx55Q6ZPL9 Gm24492-201ENSMUST00000083798 107 ntBASIC1.19□□□□□ -2.22
Ddx55Q6ZPL9 Gm25887-201ENSMUST00000157777 84 ntBASIC1.18□□□□□ -2.22
Ddx55Q6ZPL9 Gm25678-201ENSMUST00000174984 73 ntBASIC1.18□□□□□ -2.22
Ddx55Q6ZPL9 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Ddx55Q6ZPL9 Gm23140-201ENSMUST00000082487 107 ntBASIC1.18□□□□□ -2.22
Ddx55Q6ZPL9 Gm22753-201ENSMUST00000083657 107 ntBASIC1.18□□□□□ -2.22
Ddx55Q6ZPL9 Mir764-201ENSMUST00000103259 108 ntBASIC1.17□□□□□ -2.22
Ddx55Q6ZPL9 Gm25968-201ENSMUST00000157167 100 ntBASIC1.17□□□□□ -2.22
Ddx55Q6ZPL9 Gm23601-201ENSMUST00000157259 131 ntBASIC1.17□□□□□ -2.22
Ddx55Q6ZPL9 Gm24476-201ENSMUST00000157437 131 ntBASIC1.17□□□□□ -2.22
Ddx55Q6ZPL9 Gm25889-201ENSMUST00000157775 107 ntBASIC1.17□□□□□ -2.22
Ddx55Q6ZPL9 Gm23351-201ENSMUST00000158427 125 ntBASIC1.17□□□□□ -2.22
Ddx55Q6ZPL9 Mir3079-201ENSMUST00000175428 90 ntBASIC1.17□□□□□ -2.22
Ddx55Q6ZPL9 Gm38323-201ENSMUST00000192450 210 ntBASIC1.17□□□□□ -2.22
Ddx55Q6ZPL9 Mir30a-201ENSMUST00000083471 71 ntBASIC1.17□□□□□ -2.22
Ddx55Q6ZPL9 Gm25879-201ENSMUST00000104330 107 ntBASIC1.16□□□□□ -2.22
Ddx55Q6ZPL9 Gm12469-201ENSMUST00000117623 207 ntBASIC1.16□□□□□ -2.22
Ddx55Q6ZPL9 Gm36956-201ENSMUST00000193830 214 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 132.6 ms