Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm26011-201ENSMUST00000104410 104 ntBASIC0.55□□□□□ -2.32
Smchd1Q6P5D8 Gm25071-201ENSMUST00000175232 70 ntBASIC0.55□□□□□ -2.32
Smchd1Q6P5D8 Gm24020-201ENSMUST00000180156 108 ntBASIC0.55□□□□□ -2.32
Smchd1Q6P5D8 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.55□□□□□ -2.32
Smchd1Q6P5D8 mt-Tt-201ENSMUST00000082422 67 ntBASIC0.55□□□□□ -2.32
Smchd1Q6P5D8 Gm24208-201ENSMUST00000082783 135 ntBASIC0.55□□□□□ -2.32
Smchd1Q6P5D8 Mir141-201ENSMUST00000083540 72 ntBASIC0.55□□□□□ -2.32
Smchd1Q6P5D8 Gm23994-201ENSMUST00000158059 88 ntBASIC0.55□□□□□ -2.32
Smchd1Q6P5D8 Gm23763-201ENSMUST00000158345 60 ntBASIC0.55□□□□□ -2.32
Smchd1Q6P5D8 Gm26291-201ENSMUST00000158889 137 ntBASIC0.55□□□□□ -2.32
Smchd1Q6P5D8 Trbv25-201ENSMUST00000194700 273 ntBASIC0.55□□□□□ -2.32
Smchd1Q6P5D8 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.55□□□□□ -2.32
Smchd1Q6P5D8 Scarna9-201ENSMUST00000104318 70 ntBASIC0.54□□□□□ -2.32
Smchd1Q6P5D8 Gm26018-201ENSMUST00000104406 128 ntBASIC0.54□□□□□ -2.32
Smchd1Q6P5D8 Gm25600-201ENSMUST00000158357 106 ntBASIC0.54□□□□□ -2.32
Smchd1Q6P5D8 Gm27851-201ENSMUST00000183529 63 ntBASIC0.54□□□□□ -2.32
Smchd1Q6P5D8 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.54□□□□□ -2.32
Smchd1Q6P5D8 Gm23881-201ENSMUST00000116872 66 ntBASIC0.53□□□□□ -2.32
Smchd1Q6P5D8 Gm14946-201ENSMUST00000119859 296 ntBASIC0.53□□□□□ -2.32
Smchd1Q6P5D8 Gm24476-201ENSMUST00000157437 131 ntBASIC0.53□□□□□ -2.32
Smchd1Q6P5D8 Gm26337-201ENSMUST00000178000 79 ntBASIC0.53□□□□□ -2.32
Smchd1Q6P5D8 Gm22286-201ENSMUST00000179708 107 ntBASIC0.53□□□□□ -2.32
Smchd1Q6P5D8 Gm38298-201ENSMUST00000193578 118 ntBASIC0.53□□□□□ -2.32
Smchd1Q6P5D8 Gm44345-201ENSMUST00000199560 135 ntBASIC0.53□□□□□ -2.32
Smchd1Q6P5D8 Gm22302-201ENSMUST00000082657 106 ntBASIC0.53□□□□□ -2.32
Smchd1Q6P5D8 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.53□□□□□ -2.32
Smchd1Q6P5D8 Gm24509-201ENSMUST00000157086 101 ntBASIC0.52□□□□□ -2.33
Smchd1Q6P5D8 Gm24648-201ENSMUST00000157111 132 ntBASIC0.52□□□□□ -2.33
Smchd1Q6P5D8 Gm25358-201ENSMUST00000157189 101 ntBASIC0.52□□□□□ -2.33
Smchd1Q6P5D8 Mir21c-201ENSMUST00000184910 78 ntBASIC0.52□□□□□ -2.33
Smchd1Q6P5D8 Gm25814-201ENSMUST00000082754 107 ntBASIC0.52□□□□□ -2.33
Smchd1Q6P5D8 Gm25629-201ENSMUST00000084001 107 ntBASIC0.52□□□□□ -2.33
Smchd1Q6P5D8 Gm24913-201ENSMUST00000157286 107 ntBASIC0.52□□□□□ -2.33
Smchd1Q6P5D8 Gm26158-201ENSMUST00000158973 119 ntBASIC0.52□□□□□ -2.33
Smchd1Q6P5D8 Gm23509-201ENSMUST00000083080 160 ntBASIC0.52□□□□□ -2.33
Smchd1Q6P5D8 Gm14502-201ENSMUST00000118154 113 ntBASIC0.51□□□□□ -2.33
Smchd1Q6P5D8 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.51□□□□□ -2.33
Smchd1Q6P5D8 Gm22558-201ENSMUST00000157326 95 ntBASIC0.51□□□□□ -2.33
Smchd1Q6P5D8 Gm22966-201ENSMUST00000157957 129 ntBASIC0.51□□□□□ -2.33
Smchd1Q6P5D8 Gm43432-201ENSMUST00000196352 121 ntBASIC0.51□□□□□ -2.33
Smchd1Q6P5D8 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.5□□□□□ -2.33
Smchd1Q6P5D8 Mir669j-201ENSMUST00000179023 121 ntBASIC0.5□□□□□ -2.33
Smchd1Q6P5D8 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.5□□□□□ -2.33
Smchd1Q6P5D8 Gm22652-201ENSMUST00000083207 131 ntBASIC0.5□□□□□ -2.33
Smchd1Q6P5D8 Gm10351-201ENSMUST00000087694 125 ntBASIC0.5□□□□□ -2.33
Smchd1Q6P5D8 Gm25623-201ENSMUST00000157216 108 ntBASIC0.5□□□□□ -2.33
Smchd1Q6P5D8 Gm22983-201ENSMUST00000158308 104 ntBASIC0.5□□□□□ -2.33
Smchd1Q6P5D8 Mir6389-201ENSMUST00000183661 102 ntBASIC0.5□□□□□ -2.33
Smchd1Q6P5D8 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.49□□□□□ -2.33
Smchd1Q6P5D8 Gm22030-201ENSMUST00000116942 63 ntBASIC0.49□□□□□ -2.33
Smchd1Q6P5D8 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.49□□□□□ -2.33
Smchd1Q6P5D8 Gm22451-201ENSMUST00000122803 151 ntBASIC0.49□□□□□ -2.33
Smchd1Q6P5D8 Gm26412-201ENSMUST00000157666 55 ntBASIC0.49□□□□□ -2.33
Smchd1Q6P5D8 Gm24678-201ENSMUST00000158756 104 ntBASIC0.49□□□□□ -2.33
Smchd1Q6P5D8 Gm22638-201ENSMUST00000179674 107 ntBASIC0.49□□□□□ -2.33
Smchd1Q6P5D8 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.49□□□□□ -2.33
Smchd1Q6P5D8 AC165138.1-201ENSMUST00000226984 270 ntBASIC0.49□□□□□ -2.33
Smchd1Q6P5D8 Gm22303-201ENSMUST00000082686 122 ntBASIC0.49□□□□□ -2.33
Smchd1Q6P5D8 Gm23578-201ENSMUST00000103943 104 ntBASIC0.48□□□□□ -2.33
Smchd1Q6P5D8 Gm23482-201ENSMUST00000104172 122 ntBASIC0.48□□□□□ -2.33
Smchd1Q6P5D8 Gm26091-201ENSMUST00000122704 82 ntBASIC0.48□□□□□ -2.33
Smchd1Q6P5D8 Gm24894-201ENSMUST00000122744 118 ntBASIC0.48□□□□□ -2.33
Smchd1Q6P5D8 Gm23672-201ENSMUST00000157471 107 ntBASIC0.48□□□□□ -2.33
Smchd1Q6P5D8 Gm25014-201ENSMUST00000158401 103 ntBASIC0.48□□□□□ -2.33
Smchd1Q6P5D8 Mir216a-201ENSMUST00000083605 72 ntBASIC0.48□□□□□ -2.33
Smchd1Q6P5D8 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.47□□□□□ -2.33
Smchd1Q6P5D8 Gm23601-201ENSMUST00000157259 131 ntBASIC0.47□□□□□ -2.33
Smchd1Q6P5D8 Gm26398-201ENSMUST00000179015 127 ntBASIC0.47□□□□□ -2.33
Smchd1Q6P5D8 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.47□□□□□ -2.33
Smchd1Q6P5D8 Gm22196-201ENSMUST00000116865 109 ntBASIC0.47□□□□□ -2.33
Smchd1Q6P5D8 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.47□□□□□ -2.33
Smchd1Q6P5D8 Gm23291-201ENSMUST00000175611 78 ntBASIC0.47□□□□□ -2.33
Smchd1Q6P5D8 Gm23239-201ENSMUST00000083006 181 ntBASIC0.47□□□□□ -2.33
Smchd1Q6P5D8 Gm26338-201ENSMUST00000102372 110 ntBASIC0.45□□□□□ -2.34
Smchd1Q6P5D8 Gm25393-201ENSMUST00000157336 285 ntBASIC0.45□□□□□ -2.34
Smchd1Q6P5D8 Gm25300-201ENSMUST00000175284 84 ntBASIC0.45□□□□□ -2.34
Smchd1Q6P5D8 AC164561.1-201ENSMUST00000220414 115 ntBASIC0.45□□□□□ -2.34
Smchd1Q6P5D8 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
Smchd1Q6P5D8 Gm24030-201ENSMUST00000083931 164 ntBASIC0.45□□□□□ -2.34
Smchd1Q6P5D8 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.45□□□□□ -2.34
Smchd1Q6P5D8 Mir670-201ENSMUST00000102380 100 ntBASIC0.45□□□□□ -2.34
Smchd1Q6P5D8 Gm24246-201ENSMUST00000157315 132 ntBASIC0.45□□□□□ -2.34
Smchd1Q6P5D8 Gm25974-201ENSMUST00000158701 94 ntBASIC0.45□□□□□ -2.34
Smchd1Q6P5D8 Gm28767-201ENSMUST00000188601 114 ntBASIC0.45□□□□□ -2.34
Smchd1Q6P5D8 Mir362-201ENSMUST00000093592 65 ntBASIC0.45□□□□□ -2.34
Smchd1Q6P5D8 Gm14884-201ENSMUST00000120456 196 ntBASIC0.44□□□□□ -2.34
Smchd1Q6P5D8 Gm24575-201ENSMUST00000175502 77 ntBASIC0.44□□□□□ -2.34
Smchd1Q6P5D8 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC0.44□□□□□ -2.34
Smchd1Q6P5D8 Gm27297-201ENSMUST00000183395 105 ntBASIC0.44□□□□□ -2.34
Smchd1Q6P5D8 Gm27943-201ENSMUST00000184844 116 ntBASIC0.44□□□□□ -2.34
Smchd1Q6P5D8 Gm2077-201ENSMUST00000195017 319 ntBASIC0.44□□□□□ -2.34
Smchd1Q6P5D8 Mir376b-201ENSMUST00000195930 82 ntBASIC0.44□□□□□ -2.34
Smchd1Q6P5D8 Gm3702-201ENSMUST00000211754 346 ntBASIC0.44□□□□□ -2.34
Smchd1Q6P5D8 Gm26062-201ENSMUST00000083379 107 ntBASIC0.44□□□□□ -2.34
Smchd1Q6P5D8 Gm16186-201ENSMUST00000120132 216 ntBASIC0.43□□□□□ -2.34
Smchd1Q6P5D8 Gm44469-201ENSMUST00000198558 79 ntBASIC0.43□□□□□ -2.34
Smchd1Q6P5D8 Gm22088-201ENSMUST00000158341 117 ntBASIC0.43□□□□□ -2.34
Smchd1Q6P5D8 Gm44859-201ENSMUST00000207831 94 ntBASIC0.43□□□□□ -2.34
Smchd1Q6P5D8 Mir3094-201ENSMUST00000175121 64 ntBASIC0.42□□□□□ -2.34
Smchd1Q6P5D8 Gm45197-201ENSMUST00000205288 151 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 145 ms