Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm13065-201ENSMUST00000119178 141 ntBASIC0.11□□□□□ -2.39
Upf3aQ3ULJ3 Gm11644-201ENSMUST00000119735 150 ntBASIC0.11□□□□□ -2.39
Upf3aQ3ULJ3 Gm25980-201ENSMUST00000157176 218 ntBASIC0.11□□□□□ -2.39
Upf3aQ3ULJ3 Gm22606-201ENSMUST00000158290 103 ntBASIC0.11□□□□□ -2.39
Upf3aQ3ULJ3 Gm25952-201ENSMUST00000175329 74 ntBASIC0.11□□□□□ -2.39
Upf3aQ3ULJ3 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
Upf3aQ3ULJ3 Gm25040-201ENSMUST00000103877 66 ntBASIC0.1□□□□□ -2.39
Upf3aQ3ULJ3 Gm24129-201ENSMUST00000158537 97 ntBASIC0.1□□□□□ -2.39
Upf3aQ3ULJ3 Gm25408-201ENSMUST00000104104 133 ntBASIC0.09□□□□□ -2.4
Upf3aQ3ULJ3 Gm23821-201ENSMUST00000158738 106 ntBASIC0.09□□□□□ -2.4
Upf3aQ3ULJ3 Mir376b-201ENSMUST00000195930 82 ntBASIC0.09□□□□□ -2.4
Upf3aQ3ULJ3 Gm44338-201ENSMUST00000198614 110 ntBASIC0.09□□□□□ -2.4
Upf3aQ3ULJ3 Snora75-201ENSMUST00000082903 133 ntBASIC0.09□□□□□ -2.4
Upf3aQ3ULJ3 Gm23209-201ENSMUST00000158667 110 ntBASIC0.08□□□□□ -2.4
Upf3aQ3ULJ3 Gm25974-201ENSMUST00000158701 94 ntBASIC0.08□□□□□ -2.4
Upf3aQ3ULJ3 Gm22139-201ENSMUST00000158747 105 ntBASIC0.08□□□□□ -2.4
Upf3aQ3ULJ3 Gm26290-201ENSMUST00000158891 145 ntBASIC0.08□□□□□ -2.4
Upf3aQ3ULJ3 Gm28001-201ENSMUST00000183561 117 ntBASIC0.08□□□□□ -2.4
Upf3aQ3ULJ3 Gm22303-201ENSMUST00000082686 122 ntBASIC0.08□□□□□ -2.4
Upf3aQ3ULJ3 Gm23445-201ENSMUST00000082800 107 ntBASIC0.08□□□□□ -2.4
Upf3aQ3ULJ3 Gm23509-201ENSMUST00000083080 160 ntBASIC0.08□□□□□ -2.4
Upf3aQ3ULJ3 Gm25136-201ENSMUST00000083253 115 ntBASIC0.08□□□□□ -2.4
Upf3aQ3ULJ3 Gm24233-201ENSMUST00000104317 122 ntBASIC0.07□□□□□ -2.4
Upf3aQ3ULJ3 Gm24054-201ENSMUST00000158619 105 ntBASIC0.07□□□□□ -2.4
Upf3aQ3ULJ3 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.07□□□□□ -2.4
Upf3aQ3ULJ3 Gm26398-201ENSMUST00000179015 127 ntBASIC0.07□□□□□ -2.4
Upf3aQ3ULJ3 Gm37746-201ENSMUST00000193249 198 ntBASIC0.07□□□□□ -2.4
Upf3aQ3ULJ3 Gm24903-201ENSMUST00000158131 126 ntBASIC0.06□□□□□ -2.4
Upf3aQ3ULJ3 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
Upf3aQ3ULJ3 Gm24457-201ENSMUST00000083196 105 ntBASIC0.06□□□□□ -2.4
Upf3aQ3ULJ3 Gm24793-201ENSMUST00000104289 132 ntBASIC0.05□□□□□ -2.4
Upf3aQ3ULJ3 Gm23253-201ENSMUST00000157441 104 ntBASIC0.05□□□□□ -2.4
Upf3aQ3ULJ3 Gm24131-201ENSMUST00000158539 107 ntBASIC0.05□□□□□ -2.4
Upf3aQ3ULJ3 Gm23020-201ENSMUST00000158766 253 ntBASIC0.05□□□□□ -2.4
Upf3aQ3ULJ3 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.05□□□□□ -2.4
Upf3aQ3ULJ3 Gm22373-201ENSMUST00000104584 89 ntBASIC0.04□□□□□ -2.4
Upf3aQ3ULJ3 Gm25565-201ENSMUST00000104605 105 ntBASIC0.04□□□□□ -2.4
Upf3aQ3ULJ3 Mir466h-201ENSMUST00000104748 81 ntBASIC0.04□□□□□ -2.4
Upf3aQ3ULJ3 Mir1966-201ENSMUST00000158807 108 ntBASIC0.04□□□□□ -2.4
Upf3aQ3ULJ3 Mir3089-201ENSMUST00000175350 84 ntBASIC0.04□□□□□ -2.4
Upf3aQ3ULJ3 Mir8107-201ENSMUST00000184024 117 ntBASIC0.04□□□□□ -2.4
Upf3aQ3ULJ3 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.04□□□□□ -2.4
Upf3aQ3ULJ3 Gm26202-201ENSMUST00000082910 65 ntBASIC0.04□□□□□ -2.4
Upf3aQ3ULJ3 Gm23337-201ENSMUST00000158959 118 ntBASIC0.03□□□□□ -2.4
Upf3aQ3ULJ3 Gm22699-201ENSMUST00000175376 105 ntBASIC0.03□□□□□ -2.4
Upf3aQ3ULJ3 Gm37545-201ENSMUST00000186512 148 ntBASIC0.03□□□□□ -2.4
Upf3aQ3ULJ3 Gm22652-201ENSMUST00000083207 131 ntBASIC0.03□□□□□ -2.4
Upf3aQ3ULJ3 Gm23749-201ENSMUST00000104223 131 ntBASIC0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm22337-201ENSMUST00000157721 132 ntBASIC0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm25716-201ENSMUST00000158628 104 ntBASIC0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm26468-201ENSMUST00000158644 106 ntBASIC0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm44353-201ENSMUST00000200618 138 ntBASIC0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm45197-201ENSMUST00000205288 151 ntBASIC0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm44602-201ENSMUST00000205948 132 ntBASIC0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm44853-201ENSMUST00000209070 250 ntBASIC0.02□□□□□ -2.41
Upf3aQ3ULJ3 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm25629-201ENSMUST00000084001 107 ntBASIC0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm23947-201ENSMUST00000093636 107 ntBASIC0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm25599-201ENSMUST00000157816 103 ntBASIC0.01□□□□□ -2.41
Upf3aQ3ULJ3 Gm25653-201ENSMUST00000158473 138 ntBASIC0.01□□□□□ -2.41
Upf3aQ3ULJ3 Gm22621-201ENSMUST00000179678 74 ntBASIC0.01□□□□□ -2.41
Upf3aQ3ULJ3 Gm25797-201ENSMUST00000082640 107 ntBASIC0.01□□□□□ -2.41
Upf3aQ3ULJ3 Mir18-201ENSMUST00000083469 96 ntBASIC0.01□□□□□ -2.41
Upf3aQ3ULJ3 Gm22368-201ENSMUST00000102416 109 ntBASIC0□□□□□ -2.41
Upf3aQ3ULJ3 Gm26011-201ENSMUST00000104410 104 ntBASIC0□□□□□ -2.41
Upf3aQ3ULJ3 Snord90-201ENSMUST00000104568 111 ntBASIC0□□□□□ -2.41
Upf3aQ3ULJ3 Gm23661-201ENSMUST00000122630 87 ntBASIC0□□□□□ -2.41
Upf3aQ3ULJ3 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
Upf3aQ3ULJ3 Gm25703-201ENSMUST00000083123 151 ntBASIC0□□□□□ -2.41
Upf3aQ3ULJ3 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.01□□□□□ -2.41
Upf3aQ3ULJ3 Gm23852-201ENSMUST00000158376 77 ntBASIC-0.01□□□□□ -2.41
Upf3aQ3ULJ3 Traj61-201ENSMUST00000165025 72 ntBASIC-0.01□□□□□ -2.41
Upf3aQ3ULJ3 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.01□□□□□ -2.41
Upf3aQ3ULJ3 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.01□□□□□ -2.41
Upf3aQ3ULJ3 Gm44345-201ENSMUST00000199560 135 ntBASIC-0.01□□□□□ -2.41
Upf3aQ3ULJ3 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.01□□□□□ -2.41
Upf3aQ3ULJ3 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.01□□□□□ -2.41
Upf3aQ3ULJ3 Gm24590-201ENSMUST00000116699 119 ntBASIC-0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm23990-201ENSMUST00000117031 117 ntBASIC-0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm24461-201ENSMUST00000082735 103 ntBASIC-0.02□□□□□ -2.41
Upf3aQ3ULJ3 Snord47-201ENSMUST00000083034 77 ntBASIC-0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.02□□□□□ -2.41
Upf3aQ3ULJ3 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.03□□□□□ -2.41
Upf3aQ3ULJ3 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.03□□□□□ -2.41
Upf3aQ3ULJ3 Gm23504-201ENSMUST00000158988 95 ntBASIC-0.03□□□□□ -2.41
Upf3aQ3ULJ3 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.03□□□□□ -2.41
Upf3aQ3ULJ3 Mir141-201ENSMUST00000083540 72 ntBASIC-0.03□□□□□ -2.41
Upf3aQ3ULJ3 Gm25056-201ENSMUST00000157372 62 ntBASIC-0.04□□□□□ -2.42
Upf3aQ3ULJ3 Gm23864-201ENSMUST00000177607 107 ntBASIC-0.04□□□□□ -2.42
Upf3aQ3ULJ3 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.04□□□□□ -2.42
Upf3aQ3ULJ3 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.04□□□□□ -2.42
Upf3aQ3ULJ3 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.05□□□□□ -2.42
Upf3aQ3ULJ3 Gm24246-201ENSMUST00000157315 132 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 179.6 ms