Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm25629-201ENSMUST00000084001 107 ntBASIC1.99□□□□□ -2.09
Limch1Q3UH68 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
Limch1Q3UH68 Gm22677-201ENSMUST00000116977 108 ntBASIC1.98□□□□□ -2.09
Limch1Q3UH68 Gm24728-201ENSMUST00000158226 125 ntBASIC1.98□□□□□ -2.09
Limch1Q3UH68 Gm25958-201ENSMUST00000175114 71 ntBASIC1.98□□□□□ -2.09
Limch1Q3UH68 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.98□□□□□ -2.09
Limch1Q3UH68 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.98□□□□□ -2.09
Limch1Q3UH68 Gm24151-201ENSMUST00000082758 141 ntBASIC1.98□□□□□ -2.09
Limch1Q3UH68 Gm25650-201ENSMUST00000083784 162 ntBASIC1.98□□□□□ -2.09
Limch1Q3UH68 Mir3096-201ENSMUST00000116685 71 ntBASIC1.97□□□□□ -2.09
Limch1Q3UH68 Gm25279-201ENSMUST00000122608 133 ntBASIC1.97□□□□□ -2.09
Limch1Q3UH68 Gm23900-201ENSMUST00000157569 108 ntBASIC1.97□□□□□ -2.09
Limch1Q3UH68 Mir148b-201ENSMUST00000083626 97 ntBASIC1.97□□□□□ -2.09
Limch1Q3UH68 Mir466l-201ENSMUST00000104866 121 ntBASIC1.96□□□□□ -2.1
Limch1Q3UH68 Mir1899-201ENSMUST00000122798 96 ntBASIC1.96□□□□□ -2.1
Limch1Q3UH68 Gm26133-201ENSMUST00000157363 100 ntBASIC1.96□□□□□ -2.1
Limch1Q3UH68 Gm23714-201ENSMUST00000179259 105 ntBASIC1.96□□□□□ -2.1
Limch1Q3UH68 Mir7241-201ENSMUST00000184532 64 ntBASIC1.96□□□□□ -2.1
Limch1Q3UH68 Snord60-201ENSMUST00000082834 78 ntBASIC1.96□□□□□ -2.1
Limch1Q3UH68 Gm27686-201ENSMUST00000185123 91 ntBASIC1.95□□□□□ -2.1
Limch1Q3UH68 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.94□□□□□ -2.1
Limch1Q3UH68 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Limch1Q3UH68 Gm14923-201ENSMUST00000118270 155 ntBASIC1.94□□□□□ -2.1
Limch1Q3UH68 Gm24399-201ENSMUST00000157869 74 ntBASIC1.94□□□□□ -2.1
Limch1Q3UH68 Gm26038-201ENSMUST00000158151 106 ntBASIC1.94□□□□□ -2.1
Limch1Q3UH68 Gm22140-201ENSMUST00000158745 120 ntBASIC1.94□□□□□ -2.1
Limch1Q3UH68 Gm25229-201ENSMUST00000178587 79 ntBASIC1.94□□□□□ -2.1
Limch1Q3UH68 Gm27639-201ENSMUST00000184937 85 ntBASIC1.94□□□□□ -2.1
Limch1Q3UH68 Gm22809-201ENSMUST00000082743 156 ntBASIC1.94□□□□□ -2.1
Limch1Q3UH68 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Limch1Q3UH68 Gm22386-201ENSMUST00000158192 129 ntBASIC1.93□□□□□ -2.1
Limch1Q3UH68 Gm24637-201ENSMUST00000158674 85 ntBASIC1.93□□□□□ -2.1
Limch1Q3UH68 Mir8116-201ENSMUST00000184134 97 ntBASIC1.93□□□□□ -2.1
Limch1Q3UH68 Gm25635-201ENSMUST00000082675 131 ntBASIC1.93□□□□□ -2.1
Limch1Q3UH68 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Limch1Q3UH68 Gm25382-201ENSMUST00000157811 97 ntBASIC1.92□□□□□ -2.1
Limch1Q3UH68 Gm22605-201ENSMUST00000158289 108 ntBASIC1.92□□□□□ -2.1
Limch1Q3UH68 Gm22983-201ENSMUST00000158308 104 ntBASIC1.92□□□□□ -2.1
Limch1Q3UH68 Gm23267-201ENSMUST00000178490 132 ntBASIC1.92□□□□□ -2.1
Limch1Q3UH68 Gm28794-201ENSMUST00000185276 136 ntBASIC1.92□□□□□ -2.1
Limch1Q3UH68 Gm23881-201ENSMUST00000116872 66 ntBASIC1.91□□□□□ -2.1
Limch1Q3UH68 Gm11694-201ENSMUST00000118637 159 ntBASIC1.91□□□□□ -2.1
Limch1Q3UH68 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.91□□□□□ -2.1
Limch1Q3UH68 Gm26181-201ENSMUST00000157687 106 ntBASIC1.9□□□□□ -2.11
Limch1Q3UH68 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.9□□□□□ -2.11
Limch1Q3UH68 Gm23967-201ENSMUST00000175062 78 ntBASIC1.9□□□□□ -2.11
Limch1Q3UH68 Gm18433-201ENSMUST00000192747 197 ntBASIC1.9□□□□□ -2.11
Limch1Q3UH68 Gm45754-201ENSMUST00000212380 279 ntBASIC1.9□□□□□ -2.11
Limch1Q3UH68 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.9□□□□□ -2.11
Limch1Q3UH68 Gm12469-201ENSMUST00000117623 207 ntBASIC1.89□□□□□ -2.11
Limch1Q3UH68 Gm25663-201ENSMUST00000157698 135 ntBASIC1.89□□□□□ -2.11
Limch1Q3UH68 Mir6351-201ENSMUST00000183826 99 ntBASIC1.89□□□□□ -2.11
Limch1Q3UH68 Gm27248-201ENSMUST00000184004 166 ntBASIC1.89□□□□□ -2.11
Limch1Q3UH68 Gm28383-201ENSMUST00000187563 139 ntBASIC1.89□□□□□ -2.11
Limch1Q3UH68 Gm3702-201ENSMUST00000211754 346 ntBASIC1.89□□□□□ -2.11
Limch1Q3UH68 Gm24494-201ENSMUST00000083804 81 ntBASIC1.89□□□□□ -2.11
Limch1Q3UH68 Gm25068-201ENSMUST00000103895 110 ntBASIC1.88□□□□□ -2.11
Limch1Q3UH68 Gm23468-201ENSMUST00000157125 108 ntBASIC1.88□□□□□ -2.11
Limch1Q3UH68 Gm24902-201ENSMUST00000158126 123 ntBASIC1.88□□□□□ -2.11
Limch1Q3UH68 Gm45197-201ENSMUST00000205288 151 ntBASIC1.88□□□□□ -2.11
Limch1Q3UH68 Gm44948-201ENSMUST00000209050 149 ntBASIC1.88□□□□□ -2.11
Limch1Q3UH68 Gm24203-201ENSMUST00000082949 114 ntBASIC1.88□□□□□ -2.11
Limch1Q3UH68 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Limch1Q3UH68 Gm22164-201ENSMUST00000158413 106 ntBASIC1.87□□□□□ -2.11
Limch1Q3UH68 Gm25901-201ENSMUST00000158494 130 ntBASIC1.87□□□□□ -2.11
Limch1Q3UH68 Mir1950-201ENSMUST00000158526 74 ntBASIC1.87□□□□□ -2.11
Limch1Q3UH68 Gm25831-201ENSMUST00000158924 163 ntBASIC1.87□□□□□ -2.11
Limch1Q3UH68 Gm24406-201ENSMUST00000083026 128 ntBASIC1.87□□□□□ -2.11
Limch1Q3UH68 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Limch1Q3UH68 Gm23482-201ENSMUST00000104172 122 ntBASIC1.86□□□□□ -2.11
Limch1Q3UH68 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.86□□□□□ -2.11
Limch1Q3UH68 Gm22205-201ENSMUST00000122655 71 ntBASIC1.86□□□□□ -2.11
Limch1Q3UH68 Gm24946-201ENSMUST00000158332 106 ntBASIC1.86□□□□□ -2.11
Limch1Q3UH68 Gm24174-201ENSMUST00000158933 111 ntBASIC1.86□□□□□ -2.11
Limch1Q3UH68 Mir468-201ENSMUST00000197332 78 ntBASIC1.86□□□□□ -2.11
Limch1Q3UH68 Gm44602-201ENSMUST00000205948 132 ntBASIC1.86□□□□□ -2.11
Limch1Q3UH68 Gm25696-201ENSMUST00000082900 105 ntBASIC1.86□□□□□ -2.11
Limch1Q3UH68 Mir709-201ENSMUST00000102190 88 ntBASIC1.85□□□□□ -2.11
Limch1Q3UH68 Mir873a-201ENSMUST00000104863 77 ntBASIC1.85□□□□□ -2.11
Limch1Q3UH68 Gm24593-201ENSMUST00000122507 106 ntBASIC1.85□□□□□ -2.11
Limch1Q3UH68 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC1.85□□□□□ -2.11
Limch1Q3UH68 Gm44469-201ENSMUST00000198558 79 ntBASIC1.85□□□□□ -2.11
Limch1Q3UH68 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Limch1Q3UH68 Gm22785-201ENSMUST00000104087 132 ntBASIC1.84□□□□□ -2.11
Limch1Q3UH68 Gm24129-201ENSMUST00000158537 97 ntBASIC1.84□□□□□ -2.11
Limch1Q3UH68 Gm24547-201ENSMUST00000158649 149 ntBASIC1.84□□□□□ -2.11
Limch1Q3UH68 Gm24222-201ENSMUST00000158834 93 ntBASIC1.84□□□□□ -2.11
Limch1Q3UH68 Gm22801-201ENSMUST00000175624 84 ntBASIC1.84□□□□□ -2.11
Limch1Q3UH68 Gm27975-201ENSMUST00000184400 101 ntBASIC1.84□□□□□ -2.11
Limch1Q3UH68 Gm44384-201ENSMUST00000200208 114 ntBASIC1.84□□□□□ -2.11
Limch1Q3UH68 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
Limch1Q3UH68 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Limch1Q3UH68 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Limch1Q3UH68 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Limch1Q3UH68 Gm22544-201ENSMUST00000104349 127 ntBASIC1.82□□□□□ -2.12
Limch1Q3UH68 Gm25061-201ENSMUST00000104665 107 ntBASIC1.82□□□□□ -2.12
Limch1Q3UH68 Mir1187-201ENSMUST00000116936 122 ntBASIC1.82□□□□□ -2.12
Limch1Q3UH68 Gm22082-201ENSMUST00000157587 161 ntBASIC1.82□□□□□ -2.12
Limch1Q3UH68 Gm22603-201ENSMUST00000157603 96 ntBASIC1.82□□□□□ -2.12
Limch1Q3UH68 Mir1961-201ENSMUST00000158643 112 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 137.5 ms