Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC2.62□□□□□ -1.99
Col9a1Q05722 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Col9a1Q05722 Gm25094-201ENSMUST00000103992 131 ntBASIC2.61□□□□□ -1.99
Col9a1Q05722 Mir1949-201ENSMUST00000157434 141 ntBASIC2.61□□□□□ -1.99
Col9a1Q05722 Gm24394-201ENSMUST00000158141 123 ntBASIC2.61□□□□□ -1.99
Col9a1Q05722 Gm23856-201ENSMUST00000158380 99 ntBASIC2.61□□□□□ -1.99
Col9a1Q05722 Gm22403-201ENSMUST00000174919 84 ntBASIC2.61□□□□□ -1.99
Col9a1Q05722 Gm38295-201ENSMUST00000191951 151 ntBASIC2.61□□□□□ -1.99
Col9a1Q05722 Gm26202-201ENSMUST00000082910 65 ntBASIC2.61□□□□□ -1.99
Col9a1Q05722 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Col9a1Q05722 Gm37824-201ENSMUST00000193430 3236 ntBASIC2.61□□□□□ -1.99
Col9a1Q05722 Gm23661-201ENSMUST00000122630 87 ntBASIC2.6□□□□□ -1.99
Col9a1Q05722 Gm24009-201ENSMUST00000157734 93 ntBASIC2.6□□□□□ -1.99
Col9a1Q05722 Gm24129-201ENSMUST00000158537 97 ntBASIC2.6□□□□□ -1.99
Col9a1Q05722 Mir3061-201ENSMUST00000175129 91 ntBASIC2.6□□□□□ -1.99
Col9a1Q05722 Gm25300-201ENSMUST00000175284 84 ntBASIC2.6□□□□□ -1.99
Col9a1Q05722 Snord93-201ENSMUST00000175580 71 ntBASIC2.6□□□□□ -1.99
Col9a1Q05722 Gm27297-201ENSMUST00000183395 105 ntBASIC2.6□□□□□ -1.99
Col9a1Q05722 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Col9a1Q05722 Gm22753-201ENSMUST00000083657 107 ntBASIC2.6□□□□□ -1.99
Col9a1Q05722 Gm24202-201ENSMUST00000082948 103 ntBASIC2.59□□□□□ -1.99
Col9a1Q05722 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col9a1Q05722 Gm11857-201ENSMUST00000119817 324 ntBASIC2.58□□□□□ -2
Col9a1Q05722 Gm23170-201ENSMUST00000157158 106 ntBASIC2.58□□□□□ -2
Col9a1Q05722 Gm24531-201ENSMUST00000157945 100 ntBASIC2.58□□□□□ -2
Col9a1Q05722 Mir669n-201ENSMUST00000158636 54 ntBASIC2.58□□□□□ -2
Col9a1Q05722 Gm24226-201ENSMUST00000158826 97 ntBASIC2.58□□□□□ -2
Col9a1Q05722 Gm25994-201ENSMUST00000175392 101 ntBASIC2.58□□□□□ -2
Col9a1Q05722 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col9a1Q05722 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.58□□□□□ -2
Col9a1Q05722 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
Col9a1Q05722 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Col9a1Q05722 Gm9009-201ENSMUST00000117321 326 ntBASIC2.57□□□□□ -2
Col9a1Q05722 Gm22078-201ENSMUST00000157593 103 ntBASIC2.57□□□□□ -2
Col9a1Q05722 Gm16111-201ENSMUST00000162128 285 ntBASIC2.57□□□□□ -2
Col9a1Q05722 Gm44469-201ENSMUST00000198558 79 ntBASIC2.57□□□□□ -2
Col9a1Q05722 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col9a1Q05722 Gm26082-201ENSMUST00000104070 127 ntBASIC2.56□□□□□ -2
Col9a1Q05722 Mir6394-201ENSMUST00000184738 99 ntBASIC2.56□□□□□ -2
Col9a1Q05722 Snord45b-201ENSMUST00000082797 71 ntBASIC2.56□□□□□ -2
Col9a1Q05722 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col9a1Q05722 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col9a1Q05722 Gm22752-201ENSMUST00000102083 109 ntBASIC2.55□□□□□ -2
Col9a1Q05722 Mir693-201ENSMUST00000102187 89 ntBASIC2.55□□□□□ -2
Col9a1Q05722 Mir297-1-201ENSMUST00000103800 76 ntBASIC2.55□□□□□ -2
Col9a1Q05722 Gm22469-201ENSMUST00000104118 133 ntBASIC2.55□□□□□ -2
Col9a1Q05722 Gm24890-201ENSMUST00000104389 102 ntBASIC2.55□□□□□ -2
Col9a1Q05722 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Col9a1Q05722 Gm26029-201ENSMUST00000158659 132 ntBASIC2.55□□□□□ -2
Col9a1Q05722 Mir3968-201ENSMUST00000175355 100 ntBASIC2.55□□□□□ -2
Col9a1Q05722 Snord87-201ENSMUST00000175437 87 ntBASIC2.55□□□□□ -2
Col9a1Q05722 Gm23649-201ENSMUST00000179007 107 ntBASIC2.55□□□□□ -2
Col9a1Q05722 Mir497-201ENSMUST00000200557 84 ntBASIC2.55□□□□□ -2
Col9a1Q05722 Mir344-201ENSMUST00000083634 95 ntBASIC2.55□□□□□ -2
Col9a1Q05722 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Col9a1Q05722 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col9a1Q05722 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Col9a1Q05722 Gm6985-201ENSMUST00000121255 271 ntBASIC2.54□□□□□ -2
Col9a1Q05722 Gm25056-201ENSMUST00000157372 62 ntBASIC2.54□□□□□ -2
Col9a1Q05722 Gm25161-201ENSMUST00000158913 132 ntBASIC2.54□□□□□ -2
Col9a1Q05722 Gm26158-201ENSMUST00000158973 119 ntBASIC2.54□□□□□ -2
Col9a1Q05722 Mir3057-201ENSMUST00000175040 91 ntBASIC2.54□□□□□ -2
Col9a1Q05722 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col9a1Q05722 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col9a1Q05722 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC2.53□□□□□ -2
Col9a1Q05722 Gm24208-201ENSMUST00000082783 135 ntBASIC2.53□□□□□ -2
Col9a1Q05722 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.53□□□□□ -2
Col9a1Q05722 Gm23109-201ENSMUST00000116867 126 ntBASIC2.52□□□□□ -2.01
Col9a1Q05722 Gm26257-201ENSMUST00000122500 107 ntBASIC2.52□□□□□ -2.01
Col9a1Q05722 Gm22961-201ENSMUST00000157964 106 ntBASIC2.52□□□□□ -2.01
Col9a1Q05722 Gm22517-201ENSMUST00000158265 136 ntBASIC2.52□□□□□ -2.01
Col9a1Q05722 Gm23005-201ENSMUST00000158950 136 ntBASIC2.52□□□□□ -2.01
Col9a1Q05722 Gm27326-201ENSMUST00000183504 95 ntBASIC2.52□□□□□ -2.01
Col9a1Q05722 Gm27786-201ENSMUST00000184337 70 ntBASIC2.52□□□□□ -2.01
Col9a1Q05722 Gm26458-201ENSMUST00000082832 128 ntBASIC2.52□□□□□ -2.01
Col9a1Q05722 Mir107-201ENSMUST00000083660 87 ntBASIC2.52□□□□□ -2.01
Col9a1Q05722 Mir876-201ENSMUST00000104659 81 ntBASIC2.51□□□□□ -2.01
Col9a1Q05722 Gm25787-201ENSMUST00000104709 92 ntBASIC2.51□□□□□ -2.01
Col9a1Q05722 Gm24900-201ENSMUST00000158128 134 ntBASIC2.51□□□□□ -2.01
Col9a1Q05722 Gm25974-201ENSMUST00000158701 94 ntBASIC2.51□□□□□ -2.01
Col9a1Q05722 Gm37807-201ENSMUST00000194310 190 ntBASIC2.51□□□□□ -2.01
Col9a1Q05722 Gm24134-201ENSMUST00000083361 71 ntBASIC2.51□□□□□ -2.01
Col9a1Q05722 Mir126a-201ENSMUST00000083606 73 ntBASIC2.51□□□□□ -2.01
Col9a1Q05722 Mir494-201ENSMUST00000093632 85 ntBASIC2.51□□□□□ -2.01
Col9a1Q05722 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col9a1Q05722 Gm25524-201ENSMUST00000101821 107 ntBASIC2.5□□□□□ -2.01
Col9a1Q05722 Gm25832-201ENSMUST00000104140 130 ntBASIC2.5□□□□□ -2.01
Col9a1Q05722 Gm27450-201ENSMUST00000104632 90 ntBASIC2.5□□□□□ -2.01
Col9a1Q05722 Gm15692-201ENSMUST00000152173 352 ntBASIC2.5□□□□□ -2.01
Col9a1Q05722 Gm25183-201ENSMUST00000157752 106 ntBASIC2.5□□□□□ -2.01
Col9a1Q05722 Gm25600-201ENSMUST00000158357 106 ntBASIC2.5□□□□□ -2.01
Col9a1Q05722 Gm10548-202ENSMUST00000165672 272 ntBASIC2.5□□□□□ -2.01
Col9a1Q05722 Gm25958-201ENSMUST00000175114 71 ntBASIC2.5□□□□□ -2.01
Col9a1Q05722 Gm23291-201ENSMUST00000175611 78 ntBASIC2.5□□□□□ -2.01
Col9a1Q05722 Gm43911-201ENSMUST00000203097 76 ntBASIC2.5□□□□□ -2.01
Col9a1Q05722 Mir93-201ENSMUST00000083593 88 ntBASIC2.5□□□□□ -2.01
Col9a1Q05722 Gm12432-201ENSMUST00000119540 186 ntBASIC2.49□□□□□ -2.01
Col9a1Q05722 n-R5s63-201ENSMUST00000122756 103 ntBASIC2.49□□□□□ -2.01
Col9a1Q05722 Gm24677-201ENSMUST00000158755 150 ntBASIC2.49□□□□□ -2.01
Col9a1Q05722 Gm22802-201ENSMUST00000175621 89 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 172.2 ms