Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.52□□□□□ -2.17
Shmt1P50431 Gm25650-201ENSMUST00000083784 162 ntBASIC1.52□□□□□ -2.17
Shmt1P50431 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.51□□□□□ -2.17
Shmt1P50431 Gm24801-201ENSMUST00000178503 105 ntBASIC1.51□□□□□ -2.17
Shmt1P50431 Gm22887-201ENSMUST00000178586 107 ntBASIC1.51□□□□□ -2.17
Shmt1P50431 Gm25899-201ENSMUST00000082672 141 ntBASIC1.51□□□□□ -2.17
Shmt1P50431 Gm22827-201ENSMUST00000083766 107 ntBASIC1.51□□□□□ -2.17
Shmt1P50431 Gm22672-201ENSMUST00000104414 134 ntBASIC1.5□□□□□ -2.17
Shmt1P50431 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC1.5□□□□□ -2.17
Shmt1P50431 Gm22944-201ENSMUST00000158662 133 ntBASIC1.5□□□□□ -2.17
Shmt1P50431 Gm24223-201ENSMUST00000158827 90 ntBASIC1.5□□□□□ -2.17
Shmt1P50431 Gm28767-201ENSMUST00000188601 114 ntBASIC1.5□□□□□ -2.17
Shmt1P50431 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.5□□□□□ -2.17
Shmt1P50431 Gm25681-201ENSMUST00000083938 106 ntBASIC1.5□□□□□ -2.17
Shmt1P50431 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
Shmt1P50431 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.49□□□□□ -2.17
Shmt1P50431 Gm23221-201ENSMUST00000158118 93 ntBASIC1.49□□□□□ -2.17
Shmt1P50431 Gm45265-201ENSMUST00000210852 2497 ntBASIC1.48□□□□□ -2.17
Shmt1P50431 Mir1191-201ENSMUST00000116883 120 ntBASIC1.48□□□□□ -2.17
Shmt1P50431 Gm22679-201ENSMUST00000116975 100 ntBASIC1.48□□□□□ -2.17
Shmt1P50431 Gm24401-201ENSMUST00000157868 91 ntBASIC1.48□□□□□ -2.17
Shmt1P50431 Mir5619-201ENSMUST00000176065 61 ntBASIC1.48□□□□□ -2.17
Shmt1P50431 Gm43911-201ENSMUST00000203097 76 ntBASIC1.48□□□□□ -2.17
Shmt1P50431 Gm14923-201ENSMUST00000118270 155 ntBASIC1.47□□□□□ -2.17
Shmt1P50431 Gm26425-201ENSMUST00000122529 82 ntBASIC1.47□□□□□ -2.17
Shmt1P50431 Gm24262-201ENSMUST00000157431 144 ntBASIC1.47□□□□□ -2.17
Shmt1P50431 Gm26038-201ENSMUST00000158151 106 ntBASIC1.47□□□□□ -2.17
Shmt1P50431 Gm25618-201ENSMUST00000179484 107 ntBASIC1.47□□□□□ -2.17
Shmt1P50431 Mir6237-201ENSMUST00000183808 91 ntBASIC1.47□□□□□ -2.17
Shmt1P50431 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.47□□□□□ -2.17
Shmt1P50431 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.47□□□□□ -2.17
Shmt1P50431 mt-Tc-201ENSMUST00000082400 66 ntBASIC1.47□□□□□ -2.17
Shmt1P50431 Gm22809-201ENSMUST00000082743 156 ntBASIC1.47□□□□□ -2.17
Shmt1P50431 Gm23344-201ENSMUST00000083818 68 ntBASIC1.47□□□□□ -2.17
Shmt1P50431 Mir1899-201ENSMUST00000122798 96 ntBASIC1.46□□□□□ -2.18
Shmt1P50431 Gm25663-201ENSMUST00000157698 135 ntBASIC1.46□□□□□ -2.18
Shmt1P50431 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.46□□□□□ -2.18
Shmt1P50431 Mir3098-201ENSMUST00000175416 87 ntBASIC1.46□□□□□ -2.18
Shmt1P50431 Gm25633-201ENSMUST00000178565 107 ntBASIC1.46□□□□□ -2.18
Shmt1P50431 Gm25449-201ENSMUST00000179389 79 ntBASIC1.46□□□□□ -2.18
Shmt1P50431 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
Shmt1P50431 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1.46□□□□□ -2.18
Shmt1P50431 Gm22805-201ENSMUST00000082739 107 ntBASIC1.46□□□□□ -2.18
Shmt1P50431 Gm24895-201ENSMUST00000122742 74 ntBASIC1.45□□□□□ -2.18
Shmt1P50431 Gm22082-201ENSMUST00000157587 161 ntBASIC1.45□□□□□ -2.18
Shmt1P50431 Gm24728-201ENSMUST00000158226 125 ntBASIC1.45□□□□□ -2.18
Shmt1P50431 Mir8116-201ENSMUST00000184134 97 ntBASIC1.45□□□□□ -2.18
Shmt1P50431 Mir6962-201ENSMUST00000199512 63 ntBASIC1.45□□□□□ -2.18
Shmt1P50431 Gm24494-201ENSMUST00000083804 81 ntBASIC1.45□□□□□ -2.18
Shmt1P50431 Gm23369-201ENSMUST00000175406 105 ntBASIC1.44□□□□□ -2.18
Shmt1P50431 Gm27419-201ENSMUST00000184576 109 ntBASIC1.44□□□□□ -2.18
Shmt1P50431 Mir468-201ENSMUST00000197332 78 ntBASIC1.44□□□□□ -2.18
Shmt1P50431 mt-Tn-201ENSMUST00000082399 71 ntBASIC1.44□□□□□ -2.18
Shmt1P50431 Gm26062-201ENSMUST00000083379 107 ntBASIC1.44□□□□□ -2.18
Shmt1P50431 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.44□□□□□ -2.18
Shmt1P50431 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Shmt1P50431 Gm26082-201ENSMUST00000104070 127 ntBASIC1.43□□□□□ -2.18
Shmt1P50431 Gm22033-201ENSMUST00000116947 90 ntBASIC1.43□□□□□ -2.18
Shmt1P50431 Gm22164-201ENSMUST00000158413 106 ntBASIC1.43□□□□□ -2.18
Shmt1P50431 Gm24677-201ENSMUST00000158755 150 ntBASIC1.43□□□□□ -2.18
Shmt1P50431 Gm44948-201ENSMUST00000209050 149 ntBASIC1.43□□□□□ -2.18
Shmt1P50431 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Shmt1P50431 Gm25992-201ENSMUST00000102437 109 ntBASIC1.42□□□□□ -2.18
Shmt1P50431 Gm14884-201ENSMUST00000120456 196 ntBASIC1.42□□□□□ -2.18
Shmt1P50431 Gm22515-201ENSMUST00000158273 305 ntBASIC1.42□□□□□ -2.18
Shmt1P50431 Gm23917-201ENSMUST00000175256 98 ntBASIC1.42□□□□□ -2.18
Shmt1P50431 Gm27894-201ENSMUST00000184177 92 ntBASIC1.42□□□□□ -2.18
Shmt1P50431 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.42□□□□□ -2.18
Shmt1P50431 Gm25635-201ENSMUST00000082675 131 ntBASIC1.42□□□□□ -2.18
Shmt1P50431 Snord60-201ENSMUST00000082834 78 ntBASIC1.42□□□□□ -2.18
Shmt1P50431 Mir343-201ENSMUST00000102360 75 ntBASIC1.41□□□□□ -2.18
Shmt1P50431 Gm25541-201ENSMUST00000116888 126 ntBASIC1.41□□□□□ -2.18
Shmt1P50431 Gm14947-201ENSMUST00000133704 303 ntBASIC1.41□□□□□ -2.18
Shmt1P50431 Mir7063-201ENSMUST00000184158 91 ntBASIC1.41□□□□□ -2.18
Shmt1P50431 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Shmt1P50431 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Shmt1P50431 Gm22785-201ENSMUST00000104087 132 ntBASIC1.4□□□□□ -2.19
Shmt1P50431 Gm23881-201ENSMUST00000116872 66 ntBASIC1.4□□□□□ -2.19
Shmt1P50431 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.4□□□□□ -2.19
Shmt1P50431 Gm25112-201ENSMUST00000122680 104 ntBASIC1.4□□□□□ -2.19
Shmt1P50431 Gm24379-201ENSMUST00000122695 86 ntBASIC1.4□□□□□ -2.19
Shmt1P50431 Gm24399-201ENSMUST00000157869 74 ntBASIC1.4□□□□□ -2.19
Shmt1P50431 Gm25014-201ENSMUST00000158401 103 ntBASIC1.4□□□□□ -2.19
Shmt1P50431 Mir3968-201ENSMUST00000175355 100 ntBASIC1.4□□□□□ -2.19
Shmt1P50431 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.4□□□□□ -2.19
Shmt1P50431 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.4□□□□□ -2.19
Shmt1P50431 Gm11694-201ENSMUST00000118637 159 ntBASIC1.39□□□□□ -2.19
Shmt1P50431 Snord13-201ENSMUST00000157627 104 ntBASIC1.39□□□□□ -2.19
Shmt1P50431 Gm12469-201ENSMUST00000117623 207 ntBASIC1.38□□□□□ -2.19
Shmt1P50431 Gm23900-201ENSMUST00000157569 108 ntBASIC1.38□□□□□ -2.19
Shmt1P50431 Gm25901-201ENSMUST00000158494 130 ntBASIC1.38□□□□□ -2.19
Shmt1P50431 Gm22801-201ENSMUST00000175624 84 ntBASIC1.38□□□□□ -2.19
Shmt1P50431 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Shmt1P50431 Gm44602-201ENSMUST00000205948 132 ntBASIC1.38□□□□□ -2.19
Shmt1P50431 Mir211-201ENSMUST00000083651 106 ntBASIC1.38□□□□□ -2.19
Shmt1P50431 Gm24697-201ENSMUST00000083881 107 ntBASIC1.38□□□□□ -2.19
Shmt1P50431 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.38□□□□□ -2.19
Shmt1P50431 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Shmt1P50431 Gm24588-201ENSMUST00000116696 83 ntBASIC1.37□□□□□ -2.19
Shmt1P50431 Gm24915-201ENSMUST00000157288 78 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 168.6 ms