Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Snord45b-201ENSMUST00000082797 71 ntBASIC2.19□□□□□ -2.06
Col18a1P39061 Gm24927-201ENSMUST00000083397 107 ntBASIC2.19□□□□□ -2.06
Col18a1P39061 Gm25756-201ENSMUST00000103990 136 ntBASIC2.18□□□□□ -2.06
Col18a1P39061 Gm26290-201ENSMUST00000158891 145 ntBASIC2.18□□□□□ -2.06
Col18a1P39061 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col18a1P39061 Gm22338-201ENSMUST00000157715 129 ntBASIC2.18□□□□□ -2.06
Col18a1P39061 Gm23649-201ENSMUST00000179007 107 ntBASIC2.18□□□□□ -2.06
Col18a1P39061 Gm25619-201ENSMUST00000122621 104 ntBASIC2.17□□□□□ -2.06
Col18a1P39061 Gm23170-201ENSMUST00000157158 106 ntBASIC2.17□□□□□ -2.06
Col18a1P39061 Gm24221-201ENSMUST00000158833 313 ntBASIC2.17□□□□□ -2.06
Col18a1P39061 AC157602.1-201ENSMUST00000197446 105 ntBASIC2.17□□□□□ -2.06
Col18a1P39061 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Col18a1P39061 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC2.17□□□□□ -2.06
Col18a1P39061 Gm25652-201ENSMUST00000083780 103 ntBASIC2.17□□□□□ -2.06
Col18a1P39061 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Col18a1P39061 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Col18a1P39061 Gm23410-201ENSMUST00000179967 107 ntBASIC2.16□□□□□ -2.06
Col18a1P39061 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.16□□□□□ -2.06
Col18a1P39061 Gm22505-201ENSMUST00000082956 108 ntBASIC2.16□□□□□ -2.06
Col18a1P39061 Gm22363-201ENSMUST00000083100 108 ntBASIC2.16□□□□□ -2.06
Col18a1P39061 Gm23814-201ENSMUST00000083230 102 ntBASIC2.16□□□□□ -2.06
Col18a1P39061 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
Col18a1P39061 Gm23340-201ENSMUST00000158955 123 ntBASIC2.15□□□□□ -2.06
Col18a1P39061 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.15□□□□□ -2.06
Col18a1P39061 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.15□□□□□ -2.06
Col18a1P39061 Mir494-201ENSMUST00000093632 85 ntBASIC2.15□□□□□ -2.06
Col18a1P39061 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Col18a1P39061 Gm22469-201ENSMUST00000104118 133 ntBASIC2.15□□□□□ -2.07
Col18a1P39061 Gm6788-201ENSMUST00000166459 270 ntBASIC2.15□□□□□ -2.07
Col18a1P39061 Gm25241-201ENSMUST00000174909 84 ntBASIC2.15□□□□□ -2.07
Col18a1P39061 Gm26217-201ENSMUST00000175212 84 ntBASIC2.15□□□□□ -2.07
Col18a1P39061 Gm27656-201ENSMUST00000185055 80 ntBASIC2.15□□□□□ -2.07
Col18a1P39061 Gm26339-201ENSMUST00000102368 99 ntBASIC2.14□□□□□ -2.07
Col18a1P39061 Gm45197-201ENSMUST00000205288 151 ntBASIC2.14□□□□□ -2.07
Col18a1P39061 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Col18a1P39061 Gm23329-201ENSMUST00000157415 108 ntBASIC2.13□□□□□ -2.07
Col18a1P39061 Snora24-201ENSMUST00000174989 130 ntBASIC2.13□□□□□ -2.07
Col18a1P39061 Mir30f-201ENSMUST00000196073 92 ntBASIC2.13□□□□□ -2.07
Col18a1P39061 Gm45386-201ENSMUST00000210194 218 ntBASIC2.13□□□□□ -2.07
Col18a1P39061 n-R5s96-201ENSMUST00000082574 124 ntBASIC2.13□□□□□ -2.07
Col18a1P39061 Gm24406-201ENSMUST00000083026 128 ntBASIC2.13□□□□□ -2.07
Col18a1P39061 Mir196b-201ENSMUST00000083509 85 ntBASIC2.13□□□□□ -2.07
Col18a1P39061 Mir344-201ENSMUST00000083634 95 ntBASIC2.13□□□□□ -2.07
Col18a1P39061 Mir451a-201ENSMUST00000093557 72 ntBASIC2.13□□□□□ -2.07
Col18a1P39061 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Col18a1P39061 Gm25991-201ENSMUST00000102439 99 ntBASIC2.13□□□□□ -2.07
Col18a1P39061 Mir297-1-201ENSMUST00000103800 76 ntBASIC2.13□□□□□ -2.07
Col18a1P39061 Gm26139-201ENSMUST00000180098 107 ntBASIC2.13□□□□□ -2.07
Col18a1P39061 Gm27698-201ENSMUST00000184060 249 ntBASIC2.13□□□□□ -2.07
Col18a1P39061 Gm45471-201ENSMUST00000211270 281 ntBASIC2.13□□□□□ -2.07
Col18a1P39061 Gm25465-201ENSMUST00000157716 105 ntBASIC2.12□□□□□ -2.07
Col18a1P39061 Gm25011-201ENSMUST00000158398 126 ntBASIC2.12□□□□□ -2.07
Col18a1P39061 Gm27582-201ENSMUST00000184084 126 ntBASIC2.12□□□□□ -2.07
Col18a1P39061 Gm27493-201ENSMUST00000184128 78 ntBASIC2.12□□□□□ -2.07
Col18a1P39061 Gm19855-201ENSMUST00000210145 249 ntBASIC2.12□□□□□ -2.07
Col18a1P39061 Snord104-201ENSMUST00000083192 70 ntBASIC2.12□□□□□ -2.07
Col18a1P39061 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC2.12□□□□□ -2.07
Col18a1P39061 Mir490-201ENSMUST00000093567 84 ntBASIC2.12□□□□□ -2.07
Col18a1P39061 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.11□□□□□ -2.07
Col18a1P39061 Gm23122-201ENSMUST00000157645 103 ntBASIC2.11□□□□□ -2.07
Col18a1P39061 Gm24686-201ENSMUST00000157755 93 ntBASIC2.11□□□□□ -2.07
Col18a1P39061 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.11□□□□□ -2.07
Col18a1P39061 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Col18a1P39061 Mir741-201ENSMUST00000103931 71 ntBASIC2.1□□□□□ -2.07
Col18a1P39061 Gm22474-201ENSMUST00000179407 107 ntBASIC2.1□□□□□ -2.07
Col18a1P39061 Gm22743-201ENSMUST00000083445 133 ntBASIC2.1□□□□□ -2.07
Col18a1P39061 Gm22866-201ENSMUST00000083947 177 ntBASIC2.1□□□□□ -2.07
Col18a1P39061 Gm25611-201ENSMUST00000104017 133 ntBASIC2.1□□□□□ -2.07
Col18a1P39061 Gm23983-201ENSMUST00000157142 114 ntBASIC2.1□□□□□ -2.07
Col18a1P39061 Gm23390-201ENSMUST00000157393 106 ntBASIC2.1□□□□□ -2.07
Col18a1P39061 Gm27921-201ENSMUST00000183968 108 ntBASIC2.1□□□□□ -2.07
Col18a1P39061 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Col18a1P39061 Gm25992-201ENSMUST00000102437 109 ntBASIC2.09□□□□□ -2.07
Col18a1P39061 Gm23482-201ENSMUST00000104172 122 ntBASIC2.09□□□□□ -2.07
Col18a1P39061 Gm23854-201ENSMUST00000158378 108 ntBASIC2.09□□□□□ -2.07
Col18a1P39061 Mir7663-201ENSMUST00000183950 61 ntBASIC2.09□□□□□ -2.07
Col18a1P39061 Gm11857-201ENSMUST00000119817 324 ntBASIC2.08□□□□□ -2.08
Col18a1P39061 Gm23900-201ENSMUST00000157569 108 ntBASIC2.08□□□□□ -2.08
Col18a1P39061 Gm24531-201ENSMUST00000157945 100 ntBASIC2.08□□□□□ -2.08
Col18a1P39061 Gm26359-201ENSMUST00000158873 101 ntBASIC2.08□□□□□ -2.08
Col18a1P39061 Gm44476-201ENSMUST00000196225 91 ntBASIC2.08□□□□□ -2.08
Col18a1P39061 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.08□□□□□ -2.08
Col18a1P39061 Gm22853-201ENSMUST00000174974 131 ntBASIC2.08□□□□□ -2.08
Col18a1P39061 Gm22888-201ENSMUST00000158640 77 ntBASIC2.07□□□□□ -2.08
Col18a1P39061 Gm26029-201ENSMUST00000158659 132 ntBASIC2.07□□□□□ -2.08
Col18a1P39061 Gm23375-201ENSMUST00000175407 83 ntBASIC2.07□□□□□ -2.08
Col18a1P39061 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.07□□□□□ -2.08
Col18a1P39061 Mir301-201ENSMUST00000083655 86 ntBASIC2.07□□□□□ -2.08
Col18a1P39061 Gm26473-201ENSMUST00000116763 127 ntBASIC2.06□□□□□ -2.08
Col18a1P39061 Gm26133-201ENSMUST00000157363 100 ntBASIC2.06□□□□□ -2.08
Col18a1P39061 Gm22401-201ENSMUST00000174927 117 ntBASIC2.06□□□□□ -2.08
Col18a1P39061 Gm24588-201ENSMUST00000116696 83 ntBASIC2.05□□□□□ -2.08
Col18a1P39061 Gm25648-201ENSMUST00000177844 79 ntBASIC2.05□□□□□ -2.08
Col18a1P39061 Mir6369-201ENSMUST00000183772 106 ntBASIC2.05□□□□□ -2.08
Col18a1P39061 Gm23370-201ENSMUST00000199545 130 ntBASIC2.05□□□□□ -2.08
Col18a1P39061 Gm25038-201ENSMUST00000082928 130 ntBASIC2.05□□□□□ -2.08
Col18a1P39061 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.05□□□□□ -2.08
Col18a1P39061 Gm24648-201ENSMUST00000157111 132 ntBASIC2.05□□□□□ -2.08
Col18a1P39061 Gm23072-201ENSMUST00000158243 123 ntBASIC2.05□□□□□ -2.08
Col18a1P39061 Gm23636-201ENSMUST00000175070 95 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 153 ms