Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Mir669a-7-201ENSMUST00000180364 87 ntBASIC-0.5□□□□□ -2.49
Sdc1P18828 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.5□□□□□ -2.49
Sdc1P18828 Mir669a-6-201ENSMUST00000196127 87 ntBASIC-0.5□□□□□ -2.49
Sdc1P18828 Mir669a-12-201ENSMUST00000197274 87 ntBASIC-0.5□□□□□ -2.49
Sdc1P18828 Mir669a-5-201ENSMUST00000197439 87 ntBASIC-0.5□□□□□ -2.49
Sdc1P18828 Mir669a-10-201ENSMUST00000197745 87 ntBASIC-0.5□□□□□ -2.49
Sdc1P18828 Mir669a-11-201ENSMUST00000197952 87 ntBASIC-0.5□□□□□ -2.49
Sdc1P18828 Mir669a-4-201ENSMUST00000198665 87 ntBASIC-0.5□□□□□ -2.49
Sdc1P18828 Mir669a-9-201ENSMUST00000200087 87 ntBASIC-0.5□□□□□ -2.49
Sdc1P18828 Mir669a-8-201ENSMUST00000200268 87 ntBASIC-0.5□□□□□ -2.49
Sdc1P18828 Gm23661-201ENSMUST00000122630 87 ntBASIC-0.51□□□□□ -2.49
Sdc1P18828 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.51□□□□□ -2.49
Sdc1P18828 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.52□□□□□ -2.49
Sdc1P18828 Mir3094-201ENSMUST00000175121 64 ntBASIC-0.52□□□□□ -2.49
Sdc1P18828 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.52□□□□□ -2.49
Sdc1P18828 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.52□□□□□ -2.49
Sdc1P18828 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.53□□□□□ -2.49
Sdc1P18828 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.53□□□□□ -2.49
Sdc1P18828 Gm22476-201ENSMUST00000158902 100 ntBASIC-0.53□□□□□ -2.49
Sdc1P18828 Snora15-201ENSMUST00000177461 131 ntBASIC-0.53□□□□□ -2.49
Sdc1P18828 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.53□□□□□ -2.49
Sdc1P18828 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.53□□□□□ -2.49
Sdc1P18828 n-R5s96-201ENSMUST00000082574 124 ntBASIC-0.53□□□□□ -2.49
Sdc1P18828 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.54□□□□□ -2.5
Sdc1P18828 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.54□□□□□ -2.5
Sdc1P18828 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.54□□□□□ -2.5
Sdc1P18828 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.54□□□□□ -2.5
Sdc1P18828 Gm25749-201ENSMUST00000175485 111 ntBASIC-0.54□□□□□ -2.5
Sdc1P18828 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.55□□□□□ -2.5
Sdc1P18828 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.55□□□□□ -2.5
Sdc1P18828 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.55□□□□□ -2.5
Sdc1P18828 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.55□□□□□ -2.5
Sdc1P18828 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.55□□□□□ -2.5
Sdc1P18828 Gm23141-201ENSMUST00000178682 94 ntBASIC-0.55□□□□□ -2.5
Sdc1P18828 AC124739.2-201ENSMUST00000222201 109 ntBASIC-0.55□□□□□ -2.5
Sdc1P18828 mt-Ta-201ENSMUST00000082398 69 ntBASIC-0.55□□□□□ -2.5
Sdc1P18828 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.55□□□□□ -2.5
Sdc1P18828 Gm22148-201ENSMUST00000104445 107 ntBASIC-0.56□□□□□ -2.5
Sdc1P18828 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.56□□□□□ -2.5
Sdc1P18828 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.56□□□□□ -2.5
Sdc1P18828 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.57□□□□□ -2.5
Sdc1P18828 Gm27792-201ENSMUST00000184031 115 ntBASIC-0.57□□□□□ -2.5
Sdc1P18828 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
Sdc1P18828 AC154245.1-201ENSMUST00000224615 601 ntBASIC-0.57□□□□□ -2.5
Sdc1P18828 Gm24132-201ENSMUST00000104745 91 ntBASIC-0.58□□□□□ -2.5
Sdc1P18828 Gm11936-201ENSMUST00000118323 160 ntBASIC-0.58□□□□□ -2.5
Sdc1P18828 Gm25390-201ENSMUST00000157341 103 ntBASIC-0.58□□□□□ -2.5
Sdc1P18828 Gm25056-201ENSMUST00000157372 62 ntBASIC-0.58□□□□□ -2.5
Sdc1P18828 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.58□□□□□ -2.5
Sdc1P18828 Mir1a-2-201ENSMUST00000198520 72 ntBASIC-0.59□□□□□ -2.5
Sdc1P18828 Mir302d-201ENSMUST00000083513 66 ntBASIC-0.59□□□□□ -2.5
Sdc1P18828 Mir488-201ENSMUST00000093595 109 ntBASIC-0.59□□□□□ -2.5
Sdc1P18828 Gm24232-201ENSMUST00000104314 132 ntBASIC-0.6□□□□□ -2.51
Sdc1P18828 Gm14001-201ENSMUST00000118847 247 ntBASIC-0.6□□□□□ -2.51
Sdc1P18828 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.6□□□□□ -2.51
Sdc1P18828 Gm25184-201ENSMUST00000157753 163 ntBASIC-0.6□□□□□ -2.51
Sdc1P18828 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.6□□□□□ -2.51
Sdc1P18828 Gm25834-201ENSMUST00000158916 101 ntBASIC-0.6□□□□□ -2.51
Sdc1P18828 Gm27905-201ENSMUST00000184005 207 ntBASIC-0.6□□□□□ -2.51
Sdc1P18828 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
Sdc1P18828 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.61□□□□□ -2.51
Sdc1P18828 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.61□□□□□ -2.51
Sdc1P18828 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC-0.61□□□□□ -2.51
Sdc1P18828 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.61□□□□□ -2.51
Sdc1P18828 Gm25397-201ENSMUST00000176951 92 ntBASIC-0.62□□□□□ -2.51
Sdc1P18828 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.62□□□□□ -2.51
Sdc1P18828 Snord61-201ENSMUST00000083176 71 ntBASIC-0.62□□□□□ -2.51
Sdc1P18828 Mir183-201ENSMUST00000083685 70 ntBASIC-0.62□□□□□ -2.51
Sdc1P18828 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
Sdc1P18828 Gm44489-201ENSMUST00000104619 97 ntBASIC-0.63□□□□□ -2.51
Sdc1P18828 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.63□□□□□ -2.51
Sdc1P18828 Gm23012-201ENSMUST00000104149 83 ntBASIC-0.64□□□□□ -2.51
Sdc1P18828 Gm25985-201ENSMUST00000122677 107 ntBASIC-0.64□□□□□ -2.51
Sdc1P18828 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.64□□□□□ -2.51
Sdc1P18828 Mir141-201ENSMUST00000083540 72 ntBASIC-0.64□□□□□ -2.51
Sdc1P18828 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.65□□□□□ -2.51
Sdc1P18828 Gm24894-201ENSMUST00000122744 118 ntBASIC-0.65□□□□□ -2.51
Sdc1P18828 Gm27579-201ENSMUST00000158113 63 ntBASIC-0.65□□□□□ -2.51
Sdc1P18828 Gm25366-201ENSMUST00000158845 124 ntBASIC-0.65□□□□□ -2.51
Sdc1P18828 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.65□□□□□ -2.51
Sdc1P18828 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.65□□□□□ -2.51
Sdc1P18828 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.66□□□□□ -2.52
Sdc1P18828 Gm27803-201ENSMUST00000183763 119 ntBASIC-0.66□□□□□ -2.52
Sdc1P18828 Gm26421-201ENSMUST00000104279 132 ntBASIC-0.67□□□□□ -2.52
Sdc1P18828 Gm14838-201ENSMUST00000118913 248 ntBASIC-0.67□□□□□ -2.52
Sdc1P18828 Gm22101-201ENSMUST00000157928 103 ntBASIC-0.67□□□□□ -2.52
Sdc1P18828 Gm38295-201ENSMUST00000191951 151 ntBASIC-0.67□□□□□ -2.52
Sdc1P18828 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.68□□□□□ -2.52
Sdc1P18828 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.68□□□□□ -2.52
Sdc1P18828 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.68□□□□□ -2.52
Sdc1P18828 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.68□□□□□ -2.52
Sdc1P18828 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.68□□□□□ -2.52
Sdc1P18828 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.69□□□□□ -2.52
Sdc1P18828 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.69□□□□□ -2.52
Sdc1P18828 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.69□□□□□ -2.52
Sdc1P18828 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.69□□□□□ -2.52
Sdc1P18828 Gm23003-201ENSMUST00000179948 107 ntBASIC-0.69□□□□□ -2.52
Sdc1P18828 Gm23987-201ENSMUST00000117039 129 ntBASIC-0.7□□□□□ -2.52
Sdc1P18828 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.7□□□□□ -2.52
Sdc1P18828 Gm27285-201ENSMUST00000183875 127 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 155.4 ms