Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm23857-201ENSMUST00000158379 111 ntBASIC1.84□□□□□ -2.11
Hoxd3P09027 Gm25974-201ENSMUST00000158701 94 ntBASIC1.84□□□□□ -2.11
Hoxd3P09027 Gm24226-201ENSMUST00000158826 97 ntBASIC1.84□□□□□ -2.11
Hoxd3P09027 Gm27722-201ENSMUST00000183908 76 ntBASIC1.84□□□□□ -2.11
Hoxd3P09027 Gm28862-201ENSMUST00000188246 163 ntBASIC1.84□□□□□ -2.11
Hoxd3P09027 Mir378a-201ENSMUST00000198300 66 ntBASIC1.84□□□□□ -2.11
Hoxd3P09027 Gm25650-201ENSMUST00000083784 162 ntBASIC1.84□□□□□ -2.11
Hoxd3P09027 Gm24698-201ENSMUST00000083883 130 ntBASIC1.84□□□□□ -2.11
Hoxd3P09027 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hoxd3P09027 Gm25991-201ENSMUST00000102439 99 ntBASIC1.83□□□□□ -2.12
Hoxd3P09027 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.83□□□□□ -2.12
Hoxd3P09027 Gm23980-201ENSMUST00000157135 158 ntBASIC1.83□□□□□ -2.12
Hoxd3P09027 Gm23172-201ENSMUST00000157160 124 ntBASIC1.83□□□□□ -2.12
Hoxd3P09027 Gm25730-201ENSMUST00000178753 165 ntBASIC1.83□□□□□ -2.12
Hoxd3P09027 Gm27297-201ENSMUST00000183395 105 ntBASIC1.83□□□□□ -2.12
Hoxd3P09027 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.83□□□□□ -2.12
Hoxd3P09027 Gm22809-201ENSMUST00000082743 156 ntBASIC1.83□□□□□ -2.12
Hoxd3P09027 Gm26202-201ENSMUST00000082910 65 ntBASIC1.83□□□□□ -2.12
Hoxd3P09027 Gm11857-201ENSMUST00000119817 324 ntBASIC1.82□□□□□ -2.12
Hoxd3P09027 Gm24900-201ENSMUST00000158128 134 ntBASIC1.82□□□□□ -2.12
Hoxd3P09027 Gm24129-201ENSMUST00000158537 97 ntBASIC1.82□□□□□ -2.12
Hoxd3P09027 Gm27517-201ENSMUST00000184347 236 ntBASIC1.82□□□□□ -2.12
Hoxd3P09027 Gm44469-201ENSMUST00000198558 79 ntBASIC1.82□□□□□ -2.12
Hoxd3P09027 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Hoxd3P09027 Mir544-201ENSMUST00000103813 78 ntBASIC1.81□□□□□ -2.12
Hoxd3P09027 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.81□□□□□ -2.12
Hoxd3P09027 Gm24210-201ENSMUST00000158263 133 ntBASIC1.81□□□□□ -2.12
Hoxd3P09027 Gm10548-202ENSMUST00000165672 272 ntBASIC1.81□□□□□ -2.12
Hoxd3P09027 Gm25642-201ENSMUST00000175137 66 ntBASIC1.81□□□□□ -2.12
Hoxd3P09027 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.81□□□□□ -2.12
Hoxd3P09027 Gm27399-201ENSMUST00000184250 78 ntBASIC1.81□□□□□ -2.12
Hoxd3P09027 Mir7118-201ENSMUST00000197760 61 ntBASIC1.81□□□□□ -2.12
Hoxd3P09027 Gm44948-201ENSMUST00000209050 149 ntBASIC1.81□□□□□ -2.12
Hoxd3P09027 AC152979.2-201ENSMUST00000219702 3814 ntBASIC1.81□□□□□ -2.12
Hoxd3P09027 Gm24311-201ENSMUST00000082570 104 ntBASIC1.81□□□□□ -2.12
Hoxd3P09027 Gm24202-201ENSMUST00000082948 103 ntBASIC1.81□□□□□ -2.12
Hoxd3P09027 Mir126a-201ENSMUST00000083606 73 ntBASIC1.81□□□□□ -2.12
Hoxd3P09027 Snora69-201ENSMUST00000083708 131 ntBASIC1.81□□□□□ -2.12
Hoxd3P09027 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
Hoxd3P09027 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Hoxd3P09027 Gm24701-201ENSMUST00000101946 105 ntBASIC1.8□□□□□ -2.12
Hoxd3P09027 Gm25300-201ENSMUST00000175284 84 ntBASIC1.8□□□□□ -2.12
Hoxd3P09027 AC127578.1-201ENSMUST00000227289 93 ntBASIC1.8□□□□□ -2.12
Hoxd3P09027 Mir423-201ENSMUST00000083584 109 ntBASIC1.8□□□□□ -2.12
Hoxd3P09027 Mir494-201ENSMUST00000093632 85 ntBASIC1.8□□□□□ -2.12
Hoxd3P09027 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.79□□□□□ -2.12
Hoxd3P09027 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Hoxd3P09027 Gm25496-201ENSMUST00000104430 120 ntBASIC1.79□□□□□ -2.12
Hoxd3P09027 Gm23170-201ENSMUST00000157158 106 ntBASIC1.79□□□□□ -2.12
Hoxd3P09027 Gm25423-201ENSMUST00000157609 107 ntBASIC1.79□□□□□ -2.12
Hoxd3P09027 Gm22664-201ENSMUST00000158719 105 ntBASIC1.79□□□□□ -2.12
Hoxd3P09027 Gm23291-201ENSMUST00000175611 78 ntBASIC1.79□□□□□ -2.12
Hoxd3P09027 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Hoxd3P09027 Mir468-201ENSMUST00000197332 78 ntBASIC1.79□□□□□ -2.12
Hoxd3P09027 Gm44477-201ENSMUST00000199661 110 ntBASIC1.79□□□□□ -2.12
Hoxd3P09027 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC1.79□□□□□ -2.12
Hoxd3P09027 Mir741-201ENSMUST00000103931 71 ntBASIC1.78□□□□□ -2.12
Hoxd3P09027 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Hoxd3P09027 Gm25110-201ENSMUST00000116684 121 ntBASIC1.78□□□□□ -2.12
Hoxd3P09027 Gm25775-201ENSMUST00000116716 121 ntBASIC1.78□□□□□ -2.12
Hoxd3P09027 Gm24795-201ENSMUST00000116737 121 ntBASIC1.78□□□□□ -2.12
Hoxd3P09027 Gm23551-201ENSMUST00000116852 121 ntBASIC1.78□□□□□ -2.12
Hoxd3P09027 Gm25171-201ENSMUST00000116926 121 ntBASIC1.78□□□□□ -2.12
Hoxd3P09027 Gm6985-201ENSMUST00000121255 271 ntBASIC1.78□□□□□ -2.12
Hoxd3P09027 Gm22159-201ENSMUST00000158412 130 ntBASIC1.78□□□□□ -2.12
Hoxd3P09027 Gm22666-201ENSMUST00000158717 164 ntBASIC1.78□□□□□ -2.12
Hoxd3P09027 Gm25958-201ENSMUST00000175114 71 ntBASIC1.78□□□□□ -2.12
Hoxd3P09027 Gm22862-201ENSMUST00000178593 121 ntBASIC1.78□□□□□ -2.12
Hoxd3P09027 Gm43722-201ENSMUST00000196054 124 ntBASIC1.78□□□□□ -2.12
Hoxd3P09027 Gm24208-201ENSMUST00000082783 135 ntBASIC1.78□□□□□ -2.12
Hoxd3P09027 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.77□□□□□ -2.13
Hoxd3P09027 Gm22011-201ENSMUST00000158790 123 ntBASIC1.77□□□□□ -2.13
Hoxd3P09027 Gm24229-201ENSMUST00000158830 118 ntBASIC1.77□□□□□ -2.13
Hoxd3P09027 Gm22801-201ENSMUST00000175624 84 ntBASIC1.77□□□□□ -2.13
Hoxd3P09027 Gm44488-201ENSMUST00000199467 119 ntBASIC1.77□□□□□ -2.13
Hoxd3P09027 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
Hoxd3P09027 Gm22750-201ENSMUST00000102076 103 ntBASIC1.76□□□□□ -2.13
Hoxd3P09027 Mir216b-201ENSMUST00000102363 86 ntBASIC1.76□□□□□ -2.13
Hoxd3P09027 Gm15536-201ENSMUST00000121411 114 ntBASIC1.76□□□□□ -2.13
Hoxd3P09027 Gm24937-201ENSMUST00000122597 134 ntBASIC1.76□□□□□ -2.13
Hoxd3P09027 Gm27959-201ENSMUST00000185172 111 ntBASIC1.76□□□□□ -2.13
Hoxd3P09027 Snord14a-201ENSMUST00000082807 87 ntBASIC1.76□□□□□ -2.13
Hoxd3P09027 Gm24134-201ENSMUST00000083361 71 ntBASIC1.76□□□□□ -2.13
Hoxd3P09027 Gm23100-201ENSMUST00000083455 141 ntBASIC1.76□□□□□ -2.13
Hoxd3P09027 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Hoxd3P09027 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Hoxd3P09027 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.75□□□□□ -2.13
Hoxd3P09027 Gm24476-201ENSMUST00000157437 131 ntBASIC1.75□□□□□ -2.13
Hoxd3P09027 Gm24677-201ENSMUST00000158755 150 ntBASIC1.75□□□□□ -2.13
Hoxd3P09027 Gm25366-201ENSMUST00000158845 124 ntBASIC1.75□□□□□ -2.13
Hoxd3P09027 Gm25693-201ENSMUST00000175443 85 ntBASIC1.75□□□□□ -2.13
Hoxd3P09027 Gm36956-201ENSMUST00000193830 214 ntBASIC1.75□□□□□ -2.13
Hoxd3P09027 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Hoxd3P09027 Gm23377-201ENSMUST00000082943 126 ntBASIC1.75□□□□□ -2.13
Hoxd3P09027 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Hoxd3P09027 Mir297-1-201ENSMUST00000103800 76 ntBASIC1.74□□□□□ -2.13
Hoxd3P09027 Gm23951-201ENSMUST00000104029 132 ntBASIC1.74□□□□□ -2.13
Hoxd3P09027 Mir344e-201ENSMUST00000104677 66 ntBASIC1.74□□□□□ -2.13
Hoxd3P09027 Gm24290-201ENSMUST00000157634 96 ntBASIC1.74□□□□□ -2.13
Hoxd3P09027 Gm22788-201ENSMUST00000157876 61 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 185.4 ms