Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Gm10548-202ENSMUST00000165672 272 ntBASIC0.16□□□□□ -2.38
Col4a2P08122 Trbv25-201ENSMUST00000194700 273 ntBASIC0.16□□□□□ -2.38
Col4a2P08122 Gm44345-201ENSMUST00000199560 135 ntBASIC0.16□□□□□ -2.38
Col4a2P08122 Gm23445-201ENSMUST00000082800 107 ntBASIC0.16□□□□□ -2.38
Col4a2P08122 Snord60-201ENSMUST00000082834 78 ntBASIC0.16□□□□□ -2.38
Col4a2P08122 Gm24457-201ENSMUST00000083196 105 ntBASIC0.16□□□□□ -2.38
Col4a2P08122 Gm25329-201ENSMUST00000158041 126 ntBASIC0.16□□□□□ -2.38
Col4a2P08122 Gm25653-201ENSMUST00000158473 138 ntBASIC0.16□□□□□ -2.38
Col4a2P08122 Gm20409-201ENSMUST00000173457 130 ntBASIC0.16□□□□□ -2.38
Col4a2P08122 Gm22699-201ENSMUST00000175376 105 ntBASIC0.16□□□□□ -2.38
Col4a2P08122 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.16□□□□□ -2.38
Col4a2P08122 Gm27475-201ENSMUST00000183420 61 ntBASIC0.16□□□□□ -2.38
Col4a2P08122 Mir6365-201ENSMUST00000183990 101 ntBASIC0.16□□□□□ -2.38
Col4a2P08122 Gm27792-201ENSMUST00000184031 115 ntBASIC0.16□□□□□ -2.38
Col4a2P08122 Mir7065-201ENSMUST00000185110 61 ntBASIC0.16□□□□□ -2.38
Col4a2P08122 Gm28767-201ENSMUST00000188601 114 ntBASIC0.16□□□□□ -2.38
Col4a2P08122 Gm25802-201ENSMUST00000082639 77 ntBASIC0.16□□□□□ -2.38
Col4a2P08122 Gm22105-201ENSMUST00000116734 116 ntBASIC0.15□□□□□ -2.39
Col4a2P08122 Gm22489-201ENSMUST00000116813 62 ntBASIC0.15□□□□□ -2.39
Col4a2P08122 Gm22195-201ENSMUST00000116861 108 ntBASIC0.15□□□□□ -2.39
Col4a2P08122 Gm25599-201ENSMUST00000157816 103 ntBASIC0.15□□□□□ -2.39
Col4a2P08122 Gm22606-201ENSMUST00000158290 103 ntBASIC0.15□□□□□ -2.39
Col4a2P08122 Gm26290-201ENSMUST00000158891 145 ntBASIC0.15□□□□□ -2.39
Col4a2P08122 Gm24321-201ENSMUST00000175348 80 ntBASIC0.15□□□□□ -2.39
Col4a2P08122 Gm42935-201ENSMUST00000202004 151 ntBASIC0.15□□□□□ -2.39
Col4a2P08122 Gm44853-201ENSMUST00000209070 250 ntBASIC0.15□□□□□ -2.39
Col4a2P08122 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.15□□□□□ -2.39
Col4a2P08122 Snord47-201ENSMUST00000083034 77 ntBASIC0.15□□□□□ -2.39
Col4a2P08122 Gm26168-201ENSMUST00000083787 112 ntBASIC0.15□□□□□ -2.39
Col4a2P08122 Gm26011-201ENSMUST00000104410 104 ntBASIC0.14□□□□□ -2.39
Col4a2P08122 Gm25565-201ENSMUST00000104605 105 ntBASIC0.14□□□□□ -2.39
Col4a2P08122 Gm22030-201ENSMUST00000116942 63 ntBASIC0.14□□□□□ -2.39
Col4a2P08122 Gm26468-201ENSMUST00000158644 106 ntBASIC0.14□□□□□ -2.39
Col4a2P08122 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
Col4a2P08122 Gm43381-201ENSMUST00000198553 165 ntBASIC0.14□□□□□ -2.39
Col4a2P08122 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.14□□□□□ -2.39
Col4a2P08122 Gm23253-201ENSMUST00000157441 104 ntBASIC0.13□□□□□ -2.39
Col4a2P08122 Gm23761-201ENSMUST00000158347 104 ntBASIC0.13□□□□□ -2.39
Col4a2P08122 Gm25716-201ENSMUST00000158628 104 ntBASIC0.13□□□□□ -2.39
Col4a2P08122 Gm29535-201ENSMUST00000185723 109 ntBASIC0.13□□□□□ -2.39
Col4a2P08122 Gm28143-201ENSMUST00000191082 109 ntBASIC0.13□□□□□ -2.39
Col4a2P08122 Gm44602-201ENSMUST00000205948 132 ntBASIC0.13□□□□□ -2.39
Col4a2P08122 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.13□□□□□ -2.39
Col4a2P08122 Gm25410-201ENSMUST00000083758 137 ntBASIC0.13□□□□□ -2.39
Col4a2P08122 Gm25600-201ENSMUST00000158357 106 ntBASIC0.13□□□□□ -2.39
Col4a2P08122 Mir3094-201ENSMUST00000175121 64 ntBASIC0.13□□□□□ -2.39
Col4a2P08122 Mir3108-201ENSMUST00000175500 79 ntBASIC0.13□□□□□ -2.39
Col4a2P08122 Gm23864-201ENSMUST00000177607 107 ntBASIC0.13□□□□□ -2.39
Col4a2P08122 Gm26097-201ENSMUST00000179642 93 ntBASIC0.13□□□□□ -2.39
Col4a2P08122 Mir21b-201ENSMUST00000184317 108 ntBASIC0.13□□□□□ -2.39
Col4a2P08122 Gm44469-201ENSMUST00000198558 79 ntBASIC0.13□□□□□ -2.39
Col4a2P08122 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC0.13□□□□□ -2.39
Col4a2P08122 Snord95-201ENSMUST00000082846 68 ntBASIC0.13□□□□□ -2.39
Col4a2P08122 Gm11644-201ENSMUST00000119735 150 ntBASIC0.12□□□□□ -2.39
Col4a2P08122 Gm24246-201ENSMUST00000157315 132 ntBASIC0.12□□□□□ -2.39
Col4a2P08122 Gm26084-201ENSMUST00000157903 104 ntBASIC0.12□□□□□ -2.39
Col4a2P08122 Scarna8-201ENSMUST00000158333 131 ntBASIC0.12□□□□□ -2.39
Col4a2P08122 Gm23917-201ENSMUST00000175256 98 ntBASIC0.12□□□□□ -2.39
Col4a2P08122 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.12□□□□□ -2.39
Col4a2P08122 Gm24750-201ENSMUST00000157843 104 ntBASIC0.11□□□□□ -2.39
Col4a2P08122 Gm22942-201ENSMUST00000158563 124 ntBASIC0.11□□□□□ -2.39
Col4a2P08122 Gm24054-201ENSMUST00000158619 105 ntBASIC0.11□□□□□ -2.39
Col4a2P08122 Gm24106-201ENSMUST00000175498 127 ntBASIC0.11□□□□□ -2.39
Col4a2P08122 Mir376b-201ENSMUST00000195930 82 ntBASIC0.11□□□□□ -2.39
Col4a2P08122 Gm44338-201ENSMUST00000198614 110 ntBASIC0.11□□□□□ -2.39
Col4a2P08122 Gm3702-201ENSMUST00000211754 346 ntBASIC0.11□□□□□ -2.39
Col4a2P08122 Gm22303-201ENSMUST00000082686 122 ntBASIC0.11□□□□□ -2.39
Col4a2P08122 Gm24833-201ENSMUST00000116775 120 ntBASIC0.1□□□□□ -2.39
Col4a2P08122 Gm25060-201ENSMUST00000157374 130 ntBASIC0.1□□□□□ -2.39
Col4a2P08122 Gm22541-201ENSMUST00000158165 127 ntBASIC0.1□□□□□ -2.39
Col4a2P08122 Mir1949-202ENSMUST00000199259 70 ntBASIC0.1□□□□□ -2.39
Col4a2P08122 Snord49b-201ENSMUST00000082503 72 ntBASIC0.1□□□□□ -2.39
Col4a2P08122 Snora75-201ENSMUST00000082903 133 ntBASIC0.1□□□□□ -2.39
Col4a2P08122 Gm22169-201ENSMUST00000083229 107 ntBASIC0.1□□□□□ -2.39
Col4a2P08122 Mir20b-201ENSMUST00000102087 80 ntBASIC0.1□□□□□ -2.39
Col4a2P08122 Gm23482-201ENSMUST00000104172 122 ntBASIC0.1□□□□□ -2.39
Col4a2P08122 Snord90-201ENSMUST00000104568 111 ntBASIC0.1□□□□□ -2.39
Col4a2P08122 Gm27735-201ENSMUST00000185085 76 ntBASIC0.1□□□□□ -2.39
Col4a2P08122 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.1□□□□□ -2.39
Col4a2P08122 Gm23509-201ENSMUST00000083080 160 ntBASIC0.1□□□□□ -2.39
Col4a2P08122 Snord70-201ENSMUST00000104157 87 ntBASIC0.09□□□□□ -2.4
Col4a2P08122 Mir1966-201ENSMUST00000158807 108 ntBASIC0.09□□□□□ -2.4
Col4a2P08122 Gm27943-201ENSMUST00000184844 116 ntBASIC0.09□□□□□ -2.4
Col4a2P08122 Gm42845-201ENSMUST00000197766 105 ntBASIC0.09□□□□□ -2.4
Col4a2P08122 Gm22981-201ENSMUST00000082611 75 ntBASIC0.09□□□□□ -2.4
Col4a2P08122 Gm24461-201ENSMUST00000082735 103 ntBASIC0.09□□□□□ -2.4
Col4a2P08122 Mir764-201ENSMUST00000103259 108 ntBASIC0.08□□□□□ -2.4
Col4a2P08122 Gm24233-201ENSMUST00000104317 122 ntBASIC0.08□□□□□ -2.4
Col4a2P08122 Gm23990-201ENSMUST00000117031 117 ntBASIC0.08□□□□□ -2.4
Col4a2P08122 Gm26091-201ENSMUST00000122704 82 ntBASIC0.08□□□□□ -2.4
Col4a2P08122 Gm23821-201ENSMUST00000158738 106 ntBASIC0.08□□□□□ -2.4
Col4a2P08122 Gm25248-201ENSMUST00000175473 98 ntBASIC0.08□□□□□ -2.4
Col4a2P08122 Gm28001-201ENSMUST00000183561 117 ntBASIC0.08□□□□□ -2.4
Col4a2P08122 Gm45374-201ENSMUST00000211388 136 ntBASIC0.08□□□□□ -2.4
Col4a2P08122 Gm22652-201ENSMUST00000083207 131 ntBASIC0.08□□□□□ -2.4
Col4a2P08122 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.08□□□□□ -2.4
Col4a2P08122 Gm24718-201ENSMUST00000157521 136 ntBASIC0.07□□□□□ -2.4
Col4a2P08122 Gm24129-201ENSMUST00000158537 97 ntBASIC0.07□□□□□ -2.4
Col4a2P08122 Gm17528-201ENSMUST00000171026 239 ntBASIC0.07□□□□□ -2.4
Col4a2P08122 Mir21c-201ENSMUST00000184910 78 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 216.8 ms