Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm22689-201ENSMUST00000102452 110 ntBASIC0.71□□□□□ -2.3
Best1O88870 Gm24579-201ENSMUST00000103964 144 ntBASIC0.71□□□□□ -2.3
Best1O88870 Gm22030-201ENSMUST00000116942 63 ntBASIC0.71□□□□□ -2.3
Best1O88870 Gm26484-201ENSMUST00000158018 106 ntBASIC0.71□□□□□ -2.3
Best1O88870 Gm27943-201ENSMUST00000184844 116 ntBASIC0.71□□□□□ -2.3
Best1O88870 Gm44859-201ENSMUST00000207831 94 ntBASIC0.71□□□□□ -2.3
Best1O88870 Gm24920-201ENSMUST00000083018 85 ntBASIC0.71□□□□□ -2.3
Best1O88870 Gm24290-201ENSMUST00000157634 96 ntBASIC0.7□□□□□ -2.3
Best1O88870 Gm22349-201ENSMUST00000157864 107 ntBASIC0.7□□□□□ -2.3
Best1O88870 Gm44458-201ENSMUST00000196594 143 ntBASIC0.7□□□□□ -2.3
Best1O88870 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.7□□□□□ -2.3
Best1O88870 Gm24913-201ENSMUST00000157286 107 ntBASIC0.69□□□□□ -2.3
Best1O88870 Mir376b-201ENSMUST00000195930 82 ntBASIC0.69□□□□□ -2.3
Best1O88870 Gm25071-201ENSMUST00000175232 70 ntBASIC0.68□□□□□ -2.3
Best1O88870 Mir8116-201ENSMUST00000184134 97 ntBASIC0.68□□□□□ -2.3
Best1O88870 Mir21c-201ENSMUST00000184910 78 ntBASIC0.68□□□□□ -2.3
Best1O88870 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.67□□□□□ -2.3
Best1O88870 Gm12013-201ENSMUST00000121971 155 ntBASIC0.67□□□□□ -2.3
Best1O88870 Gm24500-201ENSMUST00000158447 124 ntBASIC0.67□□□□□ -2.3
Best1O88870 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0.67□□□□□ -2.3
Best1O88870 Gm25600-201ENSMUST00000158357 106 ntBASIC0.66□□□□□ -2.3
Best1O88870 Gm24323-201ENSMUST00000175342 77 ntBASIC0.66□□□□□ -2.3
Best1O88870 Gm23922-201ENSMUST00000178792 79 ntBASIC0.66□□□□□ -2.3
Best1O88870 Gm24657-201ENSMUST00000180085 79 ntBASIC0.66□□□□□ -2.3
Best1O88870 Gm22996-201ENSMUST00000180236 79 ntBASIC0.66□□□□□ -2.3
Best1O88870 Mir1949-202ENSMUST00000199259 70 ntBASIC0.66□□□□□ -2.3
Best1O88870 AC126939.1-201ENSMUST00000224943 226 ntBASIC0.66□□□□□ -2.3
Best1O88870 Gm26202-201ENSMUST00000082910 65 ntBASIC0.66□□□□□ -2.3
Best1O88870 Gm22149-201ENSMUST00000104442 136 ntBASIC0.65□□□□□ -2.31
Best1O88870 Gm14884-201ENSMUST00000120456 196 ntBASIC0.65□□□□□ -2.31
Best1O88870 Gm16265-201ENSMUST00000134558 108 ntBASIC0.65□□□□□ -2.31
Best1O88870 Gm22708-201ENSMUST00000158987 103 ntBASIC0.65□□□□□ -2.31
Best1O88870 Mir6985-201ENSMUST00000184641 61 ntBASIC0.65□□□□□ -2.31
Best1O88870 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0.65□□□□□ -2.31
Best1O88870 Gm10813-201ENSMUST00000099936 90 ntBASIC0.65□□□□□ -2.31
Best1O88870 Gm23578-201ENSMUST00000103943 104 ntBASIC0.64□□□□□ -2.31
Best1O88870 Gm13065-201ENSMUST00000119178 141 ntBASIC0.64□□□□□ -2.31
Best1O88870 Gm23008-201ENSMUST00000158946 80 ntBASIC0.64□□□□□ -2.31
Best1O88870 Gm27851-201ENSMUST00000183529 63 ntBASIC0.63□□□□□ -2.31
Best1O88870 Gm29535-201ENSMUST00000185723 109 ntBASIC0.63□□□□□ -2.31
Best1O88870 Gm28143-201ENSMUST00000191082 109 ntBASIC0.63□□□□□ -2.31
Best1O88870 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.63□□□□□ -2.31
Best1O88870 Gm27297-201ENSMUST00000183395 105 ntBASIC0.62□□□□□ -2.31
Best1O88870 Mir6342-201ENSMUST00000183870 125 ntBASIC0.62□□□□□ -2.31
Best1O88870 Mir344-201ENSMUST00000083634 95 ntBASIC0.62□□□□□ -2.31
Best1O88870 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.61□□□□□ -2.31
Best1O88870 Gm22520-201ENSMUST00000158269 129 ntBASIC0.61□□□□□ -2.31
Best1O88870 Gm22652-201ENSMUST00000083207 131 ntBASIC0.61□□□□□ -2.31
Best1O88870 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
Best1O88870 Gm24342-201ENSMUST00000103907 104 ntBASIC0.6□□□□□ -2.31
Best1O88870 Gm25623-201ENSMUST00000157216 108 ntBASIC0.6□□□□□ -2.31
Best1O88870 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.6□□□□□ -2.31
Best1O88870 mt-Tt-201ENSMUST00000082422 67 ntBASIC0.6□□□□□ -2.31
Best1O88870 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.6□□□□□ -2.31
Best1O88870 Gm23991-201ENSMUST00000117033 93 ntBASIC0.59□□□□□ -2.31
Best1O88870 Gm26498-201ENSMUST00000177799 79 ntBASIC0.59□□□□□ -2.31
Best1O88870 Gm26230-201ENSMUST00000180141 79 ntBASIC0.59□□□□□ -2.31
Best1O88870 Gm27717-201ENSMUST00000183933 151 ntBASIC0.59□□□□□ -2.31
Best1O88870 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
Best1O88870 Gm16186-201ENSMUST00000120132 216 ntBASIC0.58□□□□□ -2.32
Best1O88870 Gm25974-201ENSMUST00000158701 94 ntBASIC0.58□□□□□ -2.32
Best1O88870 Gm25040-201ENSMUST00000103877 66 ntBASIC0.57□□□□□ -2.32
Best1O88870 Gm23601-201ENSMUST00000157259 131 ntBASIC0.57□□□□□ -2.32
Best1O88870 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC0.57□□□□□ -2.32
Best1O88870 Gm22336-201ENSMUST00000157719 107 ntBASIC0.56□□□□□ -2.32
Best1O88870 Gm23350-201ENSMUST00000158429 103 ntBASIC0.56□□□□□ -2.32
Best1O88870 Gm8034-201ENSMUST00000178853 132 ntBASIC0.56□□□□□ -2.32
Best1O88870 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.56□□□□□ -2.32
Best1O88870 Gm25006-201ENSMUST00000083813 107 ntBASIC0.56□□□□□ -2.32
Best1O88870 Gm24449-201ENSMUST00000083985 106 ntBASIC0.56□□□□□ -2.32
Best1O88870 Snord64-201ENSMUST00000104003 67 ntBASIC0.55□□□□□ -2.32
Best1O88870 Gm24278-201ENSMUST00000104239 127 ntBASIC0.55□□□□□ -2.32
Best1O88870 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.55□□□□□ -2.32
Best1O88870 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC0.55□□□□□ -2.32
Best1O88870 Gm23986-201ENSMUST00000157144 63 ntBASIC0.55□□□□□ -2.32
Best1O88870 Gm25393-201ENSMUST00000157336 285 ntBASIC0.55□□□□□ -2.32
Best1O88870 Gm23678-201ENSMUST00000083157 107 ntBASIC0.55□□□□□ -2.32
Best1O88870 Gm26168-201ENSMUST00000083787 112 ntBASIC0.55□□□□□ -2.32
Best1O88870 Gm24649-201ENSMUST00000157106 134 ntBASIC0.54□□□□□ -2.32
Best1O88870 Gm24321-201ENSMUST00000175348 80 ntBASIC0.54□□□□□ -2.32
Best1O88870 Snora75-201ENSMUST00000082903 133 ntBASIC0.54□□□□□ -2.32
Best1O88870 Gm22297-201ENSMUST00000083312 106 ntBASIC0.54□□□□□ -2.32
Best1O88870 Gm25416-201ENSMUST00000104221 107 ntBASIC0.53□□□□□ -2.32
Best1O88870 Gm24233-201ENSMUST00000104317 122 ntBASIC0.53□□□□□ -2.32
Best1O88870 Gm11694-201ENSMUST00000118637 159 ntBASIC0.53□□□□□ -2.32
Best1O88870 Gm26236-201ENSMUST00000175536 137 ntBASIC0.53□□□□□ -2.32
Best1O88870 Gm38298-201ENSMUST00000193578 118 ntBASIC0.53□□□□□ -2.32
Best1O88870 Gm43432-201ENSMUST00000196352 121 ntBASIC0.53□□□□□ -2.32
Best1O88870 Gm44455-201ENSMUST00000200061 82 ntBASIC0.53□□□□□ -2.32
Best1O88870 Gm45541-201ENSMUST00000210443 54 ntBASIC0.53□□□□□ -2.32
Best1O88870 Gm13577-201ENSMUST00000121365 205 ntBASIC0.52□□□□□ -2.33
Best1O88870 Gm22558-201ENSMUST00000157326 95 ntBASIC0.52□□□□□ -2.33
Best1O88870 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.52□□□□□ -2.33
Best1O88870 Mir7229-201ENSMUST00000197062 53 ntBASIC0.52□□□□□ -2.33
Best1O88870 Gm44602-201ENSMUST00000205948 132 ntBASIC0.52□□□□□ -2.33
Best1O88870 Gm26062-201ENSMUST00000083379 107 ntBASIC0.52□□□□□ -2.33
Best1O88870 Mir764-201ENSMUST00000103259 108 ntBASIC0.51□□□□□ -2.33
Best1O88870 Gm22196-201ENSMUST00000116865 109 ntBASIC0.51□□□□□ -2.33
Best1O88870 Gm22842-201ENSMUST00000157709 118 ntBASIC0.51□□□□□ -2.33
Best1O88870 Gm24842-201ENSMUST00000158681 54 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 277.5 ms