Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Gm16550-201ENSMUST00000162550 126 ntBASIC0.41□□□□□ -2.34
Igkv8-28A0A0G2JE47 Gm25635-201ENSMUST00000082675 131 ntBASIC0.41□□□□□ -2.34
Igkv8-28A0A0G2JE47 Mir196b-201ENSMUST00000083509 85 ntBASIC0.41□□□□□ -2.34
Igkv8-28A0A0G2JE47 Mir33-201ENSMUST00000083531 69 ntBASIC0.41□□□□□ -2.34
Igkv8-28A0A0G2JE47 Mir324-201ENSMUST00000083600 89 ntBASIC0.41□□□□□ -2.34
Igkv8-28A0A0G2JE47 Snord33-201ENSMUST00000083694 84 ntBASIC0.41□□□□□ -2.34
Igkv8-28A0A0G2JE47 Mir802-201ENSMUST00000103258 97 ntBASIC0.4□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm26274-201ENSMUST00000157103 321 ntBASIC0.4□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm26369-201ENSMUST00000157825 100 ntBASIC0.4□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm23853-201ENSMUST00000158375 104 ntBASIC0.4□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm25974-201ENSMUST00000158701 94 ntBASIC0.4□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm25300-201ENSMUST00000175284 84 ntBASIC0.4□□□□□ -2.35
Igkv8-28A0A0G2JE47 Mir3968-201ENSMUST00000175355 100 ntBASIC0.4□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm23416-201ENSMUST00000175520 95 ntBASIC0.4□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm22070-201ENSMUST00000178475 107 ntBASIC0.4□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm27851-201ENSMUST00000183529 63 ntBASIC0.4□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm28270-201ENSMUST00000188550 109 ntBASIC0.4□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm28328-201ENSMUST00000188869 109 ntBASIC0.4□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm37330-201ENSMUST00000192606 153 ntBASIC0.4□□□□□ -2.35
Igkv8-28A0A0G2JE47 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC0.4□□□□□ -2.35
Igkv8-28A0A0G2JE47 Mir216b-201ENSMUST00000102363 86 ntBASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm23766-201ENSMUST00000103894 80 ntBASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm23989-201ENSMUST00000117030 66 ntBASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm24399-201ENSMUST00000157869 74 ntBASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Mir100-201ENSMUST00000175270 80 ntBASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm22466-201ENSMUST00000175278 69 ntBASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Mir1954-201ENSMUST00000175595 86 ntBASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm23714-201ENSMUST00000179259 105 ntBASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm27894-201ENSMUST00000184177 92 ntBASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm25006-201ENSMUST00000083813 107 ntBASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm22030-201ENSMUST00000116942 63 ntBASIC0.38□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm22319-201ENSMUST00000157147 122 ntBASIC0.38□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm24947-201ENSMUST00000158334 110 ntBASIC0.38□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm23384-201ENSMUST00000158593 103 ntBASIC0.38□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm25693-201ENSMUST00000175443 85 ntBASIC0.38□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm44469-201ENSMUST00000198558 79 ntBASIC0.38□□□□□ -2.35
Igkv8-28A0A0G2JE47 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm45197-201ENSMUST00000205288 151 ntBASIC0.38□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm25894-201ENSMUST00000083458 75 ntBASIC0.38□□□□□ -2.35
Igkv8-28A0A0G2JE47 Snord80-201ENSMUST00000083801 81 ntBASIC0.38□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm25506-201ENSMUST00000104339 70 ntBASIC0.37□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm26303-201ENSMUST00000116845 119 ntBASIC0.37□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm22381-201ENSMUST00000158186 107 ntBASIC0.37□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm25715-201ENSMUST00000158627 125 ntBASIC0.37□□□□□ -2.35
Igkv8-28A0A0G2JE47 Mir3109-201ENSMUST00000175301 88 ntBASIC0.37□□□□□ -2.35
Igkv8-28A0A0G2JE47 Mir7663-201ENSMUST00000183950 61 ntBASIC0.37□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm27656-201ENSMUST00000185055 80 ntBASIC0.37□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm42844-201ENSMUST00000200355 112 ntBASIC0.37□□□□□ -2.35
Igkv8-28A0A0G2JE47 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.37□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm24705-201ENSMUST00000082808 107 ntBASIC0.37□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm26202-201ENSMUST00000082910 65 ntBASIC0.37□□□□□ -2.35
Igkv8-28A0A0G2JE47 Snord71-201ENSMUST00000104361 85 ntBASIC0.36□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm6985-201ENSMUST00000121255 271 ntBASIC0.36□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm24290-201ENSMUST00000157634 96 ntBASIC0.36□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm24129-201ENSMUST00000158537 97 ntBASIC0.36□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm27993-201ENSMUST00000184362 85 ntBASIC0.36□□□□□ -2.35
Igkv8-28A0A0G2JE47 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.36□□□□□ -2.35
Igkv8-28A0A0G2JE47 mt-Tt-201ENSMUST00000082422 67 ntBASIC0.36□□□□□ -2.35
Igkv8-28A0A0G2JE47 Mir30a-201ENSMUST00000083471 71 ntBASIC0.36□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm24468-201ENSMUST00000104489 104 ntBASIC0.35□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm26301-201ENSMUST00000104813 95 ntBASIC0.35□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm11248-201ENSMUST00000119568 201 ntBASIC0.35□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm14884-201ENSMUST00000120456 196 ntBASIC0.35□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm23601-201ENSMUST00000157259 131 ntBASIC0.35□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm29535-201ENSMUST00000185723 109 ntBASIC0.35□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm28143-201ENSMUST00000191082 109 ntBASIC0.35□□□□□ -2.35
Igkv8-28A0A0G2JE47 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.35□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm22302-201ENSMUST00000082657 106 ntBASIC0.35□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm22509-201ENSMUST00000082775 107 ntBASIC0.35□□□□□ -2.35
Igkv8-28A0A0G2JE47 Mir216a-201ENSMUST00000083605 72 ntBASIC0.35□□□□□ -2.35
Igkv8-28A0A0G2JE47 Gm24894-201ENSMUST00000122744 118 ntBASIC0.34□□□□□ -2.36
Igkv8-28A0A0G2JE47 Gm24009-201ENSMUST00000157734 93 ntBASIC0.34□□□□□ -2.36
Igkv8-28A0A0G2JE47 Gm24686-201ENSMUST00000157755 93 ntBASIC0.34□□□□□ -2.36
Igkv8-28A0A0G2JE47 Gm26712-201ENSMUST00000180813 217 ntBASIC0.34□□□□□ -2.36
Igkv8-28A0A0G2JE47 Gm43977-201ENSMUST00000203970 189 ntBASIC0.34□□□□□ -2.36
Igkv8-28A0A0G2JE47 Gm43944-201ENSMUST00000205220 120 ntBASIC0.34□□□□□ -2.36
Igkv8-28A0A0G2JE47 Gm45429-201ENSMUST00000209527 172 ntBASIC0.34□□□□□ -2.36
Igkv8-28A0A0G2JE47 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.34□□□□□ -2.36
Igkv8-28A0A0G2JE47 Gm24920-201ENSMUST00000083018 85 ntBASIC0.34□□□□□ -2.36
Igkv8-28A0A0G2JE47 Gm23654-201ENSMUST00000116758 126 ntBASIC0.33□□□□□ -2.36
Igkv8-28A0A0G2JE47 Gm22490-201ENSMUST00000157188 119 ntBASIC0.33□□□□□ -2.36
Igkv8-28A0A0G2JE47 Gm22706-201ENSMUST00000157907 112 ntBASIC0.33□□□□□ -2.36
Igkv8-28A0A0G2JE47 Gm26236-201ENSMUST00000175536 137 ntBASIC0.33□□□□□ -2.36
Igkv8-28A0A0G2JE47 Mir1949-202ENSMUST00000199259 70 ntBASIC0.33□□□□□ -2.36
Igkv8-28A0A0G2JE47 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.33□□□□□ -2.36
Igkv8-28A0A0G2JE47 Gm25040-201ENSMUST00000103877 66 ntBASIC0.32□□□□□ -2.36
Igkv8-28A0A0G2JE47 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 157.8 ms