Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Gm24030-201ENSMUST00000083931 164 ntBASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Gm6272-201ENSMUST00000121256 171 ntBASIC0.88□□□□□ -2.27
Trim54Q9ERP3 Gm25060-201ENSMUST00000157374 130 ntBASIC0.88□□□□□ -2.27
Trim54Q9ERP3 Gm23853-201ENSMUST00000158375 104 ntBASIC0.88□□□□□ -2.27
Trim54Q9ERP3 Gm24001-201ENSMUST00000158463 85 ntBASIC0.88□□□□□ -2.27
Trim54Q9ERP3 Gm25161-201ENSMUST00000158913 132 ntBASIC0.88□□□□□ -2.27
Trim54Q9ERP3 Mir695-201ENSMUST00000102261 109 ntBASIC0.87□□□□□ -2.27
Trim54Q9ERP3 Gm26091-201ENSMUST00000122704 82 ntBASIC0.87□□□□□ -2.27
Trim54Q9ERP3 Gm26412-201ENSMUST00000157666 55 ntBASIC0.87□□□□□ -2.27
Trim54Q9ERP3 Gm22966-201ENSMUST00000157957 129 ntBASIC0.87□□□□□ -2.27
Trim54Q9ERP3 Mir6364-201ENSMUST00000183396 86 ntBASIC0.87□□□□□ -2.27
Trim54Q9ERP3 Mir7079-201ENSMUST00000184697 69 ntBASIC0.87□□□□□ -2.27
Trim54Q9ERP3 Gm22753-201ENSMUST00000083657 107 ntBASIC0.87□□□□□ -2.27
Trim54Q9ERP3 Gm22689-201ENSMUST00000102452 110 ntBASIC0.86□□□□□ -2.27
Trim54Q9ERP3 Gm13577-201ENSMUST00000121365 205 ntBASIC0.86□□□□□ -2.27
Trim54Q9ERP3 Mir1899-201ENSMUST00000122798 96 ntBASIC0.86□□□□□ -2.27
Trim54Q9ERP3 Gm24476-201ENSMUST00000157437 131 ntBASIC0.86□□□□□ -2.27
Trim54Q9ERP3 Gm25329-201ENSMUST00000158041 126 ntBASIC0.86□□□□□ -2.27
Trim54Q9ERP3 Gm17528-201ENSMUST00000171026 239 ntBASIC0.86□□□□□ -2.27
Trim54Q9ERP3 Gm44301-201ENSMUST00000200362 143 ntBASIC0.86□□□□□ -2.27
Trim54Q9ERP3 Gm42935-201ENSMUST00000202004 151 ntBASIC0.86□□□□□ -2.27
Trim54Q9ERP3 Gm20734-201ENSMUST00000216939 193 ntBASIC0.86□□□□□ -2.27
Trim54Q9ERP3 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
Trim54Q9ERP3 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.85□□□□□ -2.27
Trim54Q9ERP3 Gm23008-201ENSMUST00000158946 80 ntBASIC0.85□□□□□ -2.27
Trim54Q9ERP3 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.85□□□□□ -2.27
Trim54Q9ERP3 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.85□□□□□ -2.27
Trim54Q9ERP3 Gm25814-201ENSMUST00000082754 107 ntBASIC0.85□□□□□ -2.27
Trim54Q9ERP3 Snord60-201ENSMUST00000082834 78 ntBASIC0.85□□□□□ -2.27
Trim54Q9ERP3 Gm26338-201ENSMUST00000102372 110 ntBASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Snord69-201ENSMUST00000104024 80 ntBASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Gm22786-201ENSMUST00000104086 122 ntBASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Gm23260-201ENSMUST00000158317 172 ntBASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Gm27993-201ENSMUST00000184362 85 ntBASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Gm36956-201ENSMUST00000193830 214 ntBASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Gm44470-201ENSMUST00000203913 142 ntBASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Gm23239-201ENSMUST00000083006 181 ntBASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Gm24445-201ENSMUST00000083981 107 ntBASIC0.84□□□□□ -2.27
Trim54Q9ERP3 Gm22544-201ENSMUST00000104349 127 ntBASIC0.83□□□□□ -2.28
Trim54Q9ERP3 Gm15289-201ENSMUST00000117793 244 ntBASIC0.83□□□□□ -2.28
Trim54Q9ERP3 Gm23416-201ENSMUST00000175520 95 ntBASIC0.83□□□□□ -2.28
Trim54Q9ERP3 Gm22286-201ENSMUST00000179708 107 ntBASIC0.83□□□□□ -2.28
Trim54Q9ERP3 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Trim54Q9ERP3 Gm44488-201ENSMUST00000199467 119 ntBASIC0.83□□□□□ -2.28
Trim54Q9ERP3 Gm25138-201ENSMUST00000083248 136 ntBASIC0.83□□□□□ -2.28
Trim54Q9ERP3 Mir362-201ENSMUST00000093592 65 ntBASIC0.83□□□□□ -2.28
Trim54Q9ERP3 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Gm24579-201ENSMUST00000103964 144 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Gm25416-201ENSMUST00000104221 107 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Gm24717-201ENSMUST00000157522 124 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Gm22775-201ENSMUST00000177630 120 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Gm23569-201ENSMUST00000180120 120 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Gm45492-201ENSMUST00000211611 288 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Gm23301-201ENSMUST00000082713 65 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Gm22681-201ENSMUST00000083853 106 ntBASIC0.82□□□□□ -2.28
Trim54Q9ERP3 Gm22349-201ENSMUST00000157864 107 ntBASIC0.81□□□□□ -2.28
Trim54Q9ERP3 Gm24678-201ENSMUST00000158756 104 ntBASIC0.81□□□□□ -2.28
Trim54Q9ERP3 Gm26291-201ENSMUST00000158889 137 ntBASIC0.81□□□□□ -2.28
Trim54Q9ERP3 Mir3109-201ENSMUST00000175301 88 ntBASIC0.81□□□□□ -2.28
Trim54Q9ERP3 Mir669j-201ENSMUST00000179023 121 ntBASIC0.81□□□□□ -2.28
Trim54Q9ERP3 Gm44211-201ENSMUST00000204867 145 ntBASIC0.81□□□□□ -2.28
Trim54Q9ERP3 Gm44859-201ENSMUST00000207831 94 ntBASIC0.81□□□□□ -2.28
Trim54Q9ERP3 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.81□□□□□ -2.28
Trim54Q9ERP3 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Trim54Q9ERP3 Gm23881-201ENSMUST00000116872 66 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 Gm23783-201ENSMUST00000157941 102 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 Gm26337-201ENSMUST00000178000 79 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 Gm26398-201ENSMUST00000179015 127 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 Gm28435-201ENSMUST00000185496 108 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 Gm37330-201ENSMUST00000192606 153 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 Trbv25-201ENSMUST00000194700 273 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 Gm44469-201ENSMUST00000198558 79 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 Gm24920-201ENSMUST00000083018 85 ntBASIC0.8□□□□□ -2.28
Trim54Q9ERP3 Gm23578-201ENSMUST00000103943 104 ntBASIC0.79□□□□□ -2.28
Trim54Q9ERP3 Gm23203-201ENSMUST00000104374 107 ntBASIC0.79□□□□□ -2.28
Trim54Q9ERP3 Mir1191-201ENSMUST00000116883 120 ntBASIC0.79□□□□□ -2.28
Trim54Q9ERP3 Gm25367-201ENSMUST00000158846 106 ntBASIC0.79□□□□□ -2.28
Trim54Q9ERP3 Snord33-201ENSMUST00000083694 84 ntBASIC0.79□□□□□ -2.28
Trim54Q9ERP3 Gm22451-201ENSMUST00000122803 151 ntBASIC0.78□□□□□ -2.28
Trim54Q9ERP3 Gm22340-201ENSMUST00000157717 114 ntBASIC0.78□□□□□ -2.28
Trim54Q9ERP3 Gm24323-201ENSMUST00000175342 77 ntBASIC0.78□□□□□ -2.28
Trim54Q9ERP3 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.78□□□□□ -2.28
Trim54Q9ERP3 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.78□□□□□ -2.28
Trim54Q9ERP3 Gm23735-201ENSMUST00000082551 134 ntBASIC0.78□□□□□ -2.28
Trim54Q9ERP3 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.78□□□□□ -2.28
Trim54Q9ERP3 Gm23126-201ENSMUST00000104260 134 ntBASIC0.77□□□□□ -2.29
Trim54Q9ERP3 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.77□□□□□ -2.29
Trim54Q9ERP3 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
Trim54Q9ERP3 Gm22336-201ENSMUST00000157719 107 ntBASIC0.77□□□□□ -2.29
Trim54Q9ERP3 Gm24223-201ENSMUST00000158827 90 ntBASIC0.77□□□□□ -2.29
Trim54Q9ERP3 Gm23321-201ENSMUST00000104465 126 ntBASIC0.76□□□□□ -2.29
Trim54Q9ERP3 Gm12469-201ENSMUST00000117623 207 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 136.3 ms