Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Trbv25-201ENSMUST00000194700 273 ntBASIC0.09□□□□□ -2.4
Lrif1Q8CDD9 Mir382-201ENSMUST00000083494 76 ntBASIC0.09□□□□□ -2.4
Lrif1Q8CDD9 Mir669g-201ENSMUST00000116809 123 ntBASIC0.08□□□□□ -2.4
Lrif1Q8CDD9 Gm23859-201ENSMUST00000158383 64 ntBASIC0.08□□□□□ -2.4
Lrif1Q8CDD9 Gm25693-201ENSMUST00000175443 85 ntBASIC0.08□□□□□ -2.4
Lrif1Q8CDD9 Mir3105-201ENSMUST00000175480 85 ntBASIC0.08□□□□□ -2.4
Lrif1Q8CDD9 Mir302d-201ENSMUST00000083513 66 ntBASIC0.08□□□□□ -2.4
Lrif1Q8CDD9 Gm25408-201ENSMUST00000104104 133 ntBASIC0.07□□□□□ -2.4
Lrif1Q8CDD9 Gm22030-201ENSMUST00000116942 63 ntBASIC0.07□□□□□ -2.4
Lrif1Q8CDD9 Gm24290-201ENSMUST00000157634 96 ntBASIC0.07□□□□□ -2.4
Lrif1Q8CDD9 Gm25184-201ENSMUST00000157753 163 ntBASIC0.07□□□□□ -2.4
Lrif1Q8CDD9 Gm28001-201ENSMUST00000183561 117 ntBASIC0.07□□□□□ -2.4
Lrif1Q8CDD9 Gm27332-201ENSMUST00000184893 112 ntBASIC0.07□□□□□ -2.4
Lrif1Q8CDD9 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.07□□□□□ -2.4
Lrif1Q8CDD9 Gm13065-201ENSMUST00000119178 141 ntBASIC0.06□□□□□ -2.4
Lrif1Q8CDD9 Gm25985-201ENSMUST00000122677 107 ntBASIC0.06□□□□□ -2.4
Lrif1Q8CDD9 Mir376b-201ENSMUST00000195930 82 ntBASIC0.06□□□□□ -2.4
Lrif1Q8CDD9 Gm23970-201ENSMUST00000083319 107 ntBASIC0.06□□□□□ -2.4
Lrif1Q8CDD9 Mir1191-201ENSMUST00000116883 120 ntBASIC0.05□□□□□ -2.4
Lrif1Q8CDD9 Gm26156-201ENSMUST00000116999 123 ntBASIC0.05□□□□□ -2.4
Lrif1Q8CDD9 Gm14502-201ENSMUST00000118154 113 ntBASIC0.05□□□□□ -2.4
Lrif1Q8CDD9 Gm25329-201ENSMUST00000158041 126 ntBASIC0.05□□□□□ -2.4
Lrif1Q8CDD9 Gm23180-201ENSMUST00000158686 125 ntBASIC0.05□□□□□ -2.4
Lrif1Q8CDD9 Gm23821-201ENSMUST00000158738 106 ntBASIC0.05□□□□□ -2.4
Lrif1Q8CDD9 Gm22675-201ENSMUST00000158430 104 ntBASIC0.04□□□□□ -2.4
Lrif1Q8CDD9 Gm27285-201ENSMUST00000183875 127 ntBASIC0.04□□□□□ -2.4
Lrif1Q8CDD9 Gm27607-201ENSMUST00000185162 122 ntBASIC0.04□□□□□ -2.4
Lrif1Q8CDD9 Gm22303-201ENSMUST00000082686 122 ntBASIC0.04□□□□□ -2.4
Lrif1Q8CDD9 Gm24522-201ENSMUST00000083964 108 ntBASIC0.04□□□□□ -2.4
Lrif1Q8CDD9 Mir488-201ENSMUST00000093595 109 ntBASIC0.04□□□□□ -2.4
Lrif1Q8CDD9 Mir669f-201ENSMUST00000103850 121 ntBASIC0.03□□□□□ -2.4
Lrif1Q8CDD9 Gm24232-201ENSMUST00000104314 132 ntBASIC0.03□□□□□ -2.4
Lrif1Q8CDD9 Gm23901-201ENSMUST00000157570 107 ntBASIC0.03□□□□□ -2.4
Lrif1Q8CDD9 Gm23994-201ENSMUST00000158059 88 ntBASIC0.03□□□□□ -2.4
Lrif1Q8CDD9 Gm24129-201ENSMUST00000158537 97 ntBASIC0.03□□□□□ -2.4
Lrif1Q8CDD9 Gm23977-201ENSMUST00000177871 74 ntBASIC0.03□□□□□ -2.4
Lrif1Q8CDD9 Mir6375-201ENSMUST00000197176 95 ntBASIC0.03□□□□□ -2.4
Lrif1Q8CDD9 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.03□□□□□ -2.4
Lrif1Q8CDD9 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.03□□□□□ -2.4
Lrif1Q8CDD9 Gm23278-201ENSMUST00000157911 143 ntBASIC0.02□□□□□ -2.41
Lrif1Q8CDD9 Gm24218-201ENSMUST00000180163 105 ntBASIC0.02□□□□□ -2.41
Lrif1Q8CDD9 Gm42935-201ENSMUST00000202004 151 ntBASIC0.02□□□□□ -2.41
Lrif1Q8CDD9 Gm45197-201ENSMUST00000205288 151 ntBASIC0.02□□□□□ -2.41
Lrif1Q8CDD9 Gm25703-201ENSMUST00000083123 151 ntBASIC0.02□□□□□ -2.41
Lrif1Q8CDD9 Gm23708-201ENSMUST00000104367 123 ntBASIC0.01□□□□□ -2.41
Lrif1Q8CDD9 Gm23258-201ENSMUST00000158319 106 ntBASIC0.01□□□□□ -2.41
Lrif1Q8CDD9 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.01□□□□□ -2.41
Lrif1Q8CDD9 Gm38208-201ENSMUST00000192476 114 ntBASIC0.01□□□□□ -2.41
Lrif1Q8CDD9 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.01□□□□□ -2.41
Lrif1Q8CDD9 Gm22368-201ENSMUST00000102416 109 ntBASIC0□□□□□ -2.41
Lrif1Q8CDD9 Gm25040-201ENSMUST00000103877 66 ntBASIC0□□□□□ -2.41
Lrif1Q8CDD9 Gm24233-201ENSMUST00000104317 122 ntBASIC0□□□□□ -2.41
Lrif1Q8CDD9 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0□□□□□ -2.41
Lrif1Q8CDD9 Gm22077-201ENSMUST00000157594 93 ntBASIC0□□□□□ -2.41
Lrif1Q8CDD9 Gm25600-201ENSMUST00000158357 106 ntBASIC0□□□□□ -2.41
Lrif1Q8CDD9 Gm24223-201ENSMUST00000158827 90 ntBASIC0□□□□□ -2.41
Lrif1Q8CDD9 Gm26290-201ENSMUST00000158891 145 ntBASIC0□□□□□ -2.41
Lrif1Q8CDD9 Mir3089-201ENSMUST00000175350 84 ntBASIC0□□□□□ -2.41
Lrif1Q8CDD9 Gm27465-201ENSMUST00000184290 91 ntBASIC0□□□□□ -2.41
Lrif1Q8CDD9 Snord80-202ENSMUST00000199023 77 ntBASIC0□□□□□ -2.41
Lrif1Q8CDD9 Gm44345-201ENSMUST00000199560 135 ntBASIC0□□□□□ -2.41
Lrif1Q8CDD9 AC124739.2-201ENSMUST00000222201 109 ntBASIC0□□□□□ -2.41
Lrif1Q8CDD9 Gm25482-201ENSMUST00000083225 107 ntBASIC0□□□□□ -2.41
Lrif1Q8CDD9 Gm24288-201ENSMUST00000157630 144 ntBASIC-0.01□□□□□ -2.41
Lrif1Q8CDD9 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.01□□□□□ -2.41
Lrif1Q8CDD9 Gm23320-201ENSMUST00000104462 127 ntBASIC-0.02□□□□□ -2.41
Lrif1Q8CDD9 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.02□□□□□ -2.41
Lrif1Q8CDD9 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
Lrif1Q8CDD9 Snora75-201ENSMUST00000082903 133 ntBASIC-0.02□□□□□ -2.41
Lrif1Q8CDD9 Snord61-201ENSMUST00000083176 71 ntBASIC-0.02□□□□□ -2.41
Lrif1Q8CDD9 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.02□□□□□ -2.41
Lrif1Q8CDD9 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
Lrif1Q8CDD9 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.03□□□□□ -2.41
Lrif1Q8CDD9 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.03□□□□□ -2.41
Lrif1Q8CDD9 Gm24640-201ENSMUST00000116949 126 ntBASIC-0.04□□□□□ -2.42
Lrif1Q8CDD9 Gm22626-201ENSMUST00000116990 126 ntBASIC-0.04□□□□□ -2.42
Lrif1Q8CDD9 Mir3094-201ENSMUST00000175121 64 ntBASIC-0.04□□□□□ -2.42
Lrif1Q8CDD9 Gm26426-201ENSMUST00000177866 123 ntBASIC-0.04□□□□□ -2.42
Lrif1Q8CDD9 Gm26060-201ENSMUST00000180094 123 ntBASIC-0.04□□□□□ -2.42
Lrif1Q8CDD9 Gm27803-201ENSMUST00000183763 119 ntBASIC-0.04□□□□□ -2.42
Lrif1Q8CDD9 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.05□□□□□ -2.42
Lrif1Q8CDD9 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.05□□□□□ -2.42
Lrif1Q8CDD9 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.05□□□□□ -2.42
Lrif1Q8CDD9 Gm27792-201ENSMUST00000184031 115 ntBASIC-0.06□□□□□ -2.42
Lrif1Q8CDD9 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.06□□□□□ -2.42
Lrif1Q8CDD9 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.06□□□□□ -2.42
Lrif1Q8CDD9 Gm44922-201ENSMUST00000206690 90 ntBASIC-0.06□□□□□ -2.42
Lrif1Q8CDD9 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.06□□□□□ -2.42
Lrif1Q8CDD9 Gm26204-201ENSMUST00000082906 107 ntBASIC-0.06□□□□□ -2.42
Lrif1Q8CDD9 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.06□□□□□ -2.42
Lrif1Q8CDD9 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.06□□□□□ -2.42
Lrif1Q8CDD9 Mir672-201ENSMUST00000102331 100 ntBASIC-0.07□□□□□ -2.42
Lrif1Q8CDD9 Mir1298-201ENSMUST00000116681 98 ntBASIC-0.07□□□□□ -2.42
Lrif1Q8CDD9 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.07□□□□□ -2.42
Lrif1Q8CDD9 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.07□□□□□ -2.42
Lrif1Q8CDD9 Gm26403-201ENSMUST00000158500 105 ntBASIC-0.07□□□□□ -2.42
Lrif1Q8CDD9 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.07□□□□□ -2.42
Lrif1Q8CDD9 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.07□□□□□ -2.42
Lrif1Q8CDD9 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.07□□□□□ -2.42
Lrif1Q8CDD9 Gm45002-201ENSMUST00000208045 120 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 170.2 ms