Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm23109-201ENSMUST00000116867 126 ntBASIC2.16□□□□□ -2.06
Rnf43Q5NCP0 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC2.16□□□□□ -2.06
Rnf43Q5NCP0 Gm26478-201ENSMUST00000122611 133 ntBASIC2.16□□□□□ -2.06
Rnf43Q5NCP0 Gm22205-201ENSMUST00000122655 71 ntBASIC2.16□□□□□ -2.06
Rnf43Q5NCP0 Gm16510-201ENSMUST00000153501 249 ntBASIC2.16□□□□□ -2.06
Rnf43Q5NCP0 Gm27443-201ENSMUST00000184660 98 ntBASIC2.16□□□□□ -2.06
Rnf43Q5NCP0 Mir6901-201ENSMUST00000185062 62 ntBASIC2.16□□□□□ -2.06
Rnf43Q5NCP0 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC2.16□□□□□ -2.06
Rnf43Q5NCP0 Gm26922-201ENSMUST00000082687 72 ntBASIC2.16□□□□□ -2.06
Rnf43Q5NCP0 Gm22723-201ENSMUST00000083820 129 ntBASIC2.16□□□□□ -2.06
Rnf43Q5NCP0 Gm23203-201ENSMUST00000104374 107 ntBASIC2.15□□□□□ -2.07
Rnf43Q5NCP0 Gm25847-201ENSMUST00000116793 96 ntBASIC2.15□□□□□ -2.07
Rnf43Q5NCP0 Gm22082-201ENSMUST00000157587 161 ntBASIC2.15□□□□□ -2.07
Rnf43Q5NCP0 Gm25011-201ENSMUST00000158398 126 ntBASIC2.15□□□□□ -2.07
Rnf43Q5NCP0 Gm25836-201ENSMUST00000158918 123 ntBASIC2.15□□□□□ -2.07
Rnf43Q5NCP0 Gm24366-201ENSMUST00000175383 86 ntBASIC2.15□□□□□ -2.07
Rnf43Q5NCP0 Gm25618-201ENSMUST00000179484 107 ntBASIC2.15□□□□□ -2.07
Rnf43Q5NCP0 Gm27898-201ENSMUST00000183987 80 ntBASIC2.15□□□□□ -2.07
Rnf43Q5NCP0 Gm24162-201ENSMUST00000093665 102 ntBASIC2.15□□□□□ -2.07
Rnf43Q5NCP0 Gm24384-201ENSMUST00000122693 75 ntBASIC2.14□□□□□ -2.07
Rnf43Q5NCP0 Gm25044-201ENSMUST00000158603 104 ntBASIC2.14□□□□□ -2.07
Rnf43Q5NCP0 Gm22095-201ENSMUST00000158984 150 ntBASIC2.14□□□□□ -2.07
Rnf43Q5NCP0 Gm25949-201ENSMUST00000175333 114 ntBASIC2.14□□□□□ -2.07
Rnf43Q5NCP0 Gm25730-201ENSMUST00000178753 165 ntBASIC2.14□□□□□ -2.07
Rnf43Q5NCP0 Mir5117-201ENSMUST00000083226 84 ntBASIC2.14□□□□□ -2.07
Rnf43Q5NCP0 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.13□□□□□ -2.07
Rnf43Q5NCP0 Gm24907-201ENSMUST00000116932 128 ntBASIC2.13□□□□□ -2.07
Rnf43Q5NCP0 Gm26290-201ENSMUST00000158891 145 ntBASIC2.13□□□□□ -2.07
Rnf43Q5NCP0 Gm23289-201ENSMUST00000175615 108 ntBASIC2.13□□□□□ -2.07
Rnf43Q5NCP0 Gm24495-201ENSMUST00000178575 79 ntBASIC2.13□□□□□ -2.07
Rnf43Q5NCP0 Gm22253-201ENSMUST00000179870 79 ntBASIC2.13□□□□□ -2.07
Rnf43Q5NCP0 Mir6369-201ENSMUST00000183772 106 ntBASIC2.13□□□□□ -2.07
Rnf43Q5NCP0 Mir30f-201ENSMUST00000196073 92 ntBASIC2.13□□□□□ -2.07
Rnf43Q5NCP0 Gm44408-201ENSMUST00000200205 66 ntBASIC2.13□□□□□ -2.07
Rnf43Q5NCP0 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Rnf43Q5NCP0 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Rnf43Q5NCP0 Gm25417-201ENSMUST00000104212 131 ntBASIC2.12□□□□□ -2.07
Rnf43Q5NCP0 Gm24988-201ENSMUST00000104460 121 ntBASIC2.12□□□□□ -2.07
Rnf43Q5NCP0 Gm24900-201ENSMUST00000158128 134 ntBASIC2.12□□□□□ -2.07
Rnf43Q5NCP0 Gm22539-201ENSMUST00000158167 117 ntBASIC2.12□□□□□ -2.07
Rnf43Q5NCP0 Gm25838-201ENSMUST00000158920 120 ntBASIC2.12□□□□□ -2.07
Rnf43Q5NCP0 Gm27517-201ENSMUST00000184347 236 ntBASIC2.12□□□□□ -2.07
Rnf43Q5NCP0 Mir221-201ENSMUST00000083488 95 ntBASIC2.12□□□□□ -2.07
Rnf43Q5NCP0 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.11□□□□□ -2.07
Rnf43Q5NCP0 Gm14588-201ENSMUST00000119895 172 ntBASIC2.11□□□□□ -2.07
Rnf43Q5NCP0 Gm25460-201ENSMUST00000157954 127 ntBASIC2.11□□□□□ -2.07
Rnf43Q5NCP0 Gm24394-201ENSMUST00000158141 123 ntBASIC2.11□□□□□ -2.07
Rnf43Q5NCP0 Gm25658-201ENSMUST00000158472 128 ntBASIC2.11□□□□□ -2.07
Rnf43Q5NCP0 Mir3057-201ENSMUST00000175040 91 ntBASIC2.11□□□□□ -2.07
Rnf43Q5NCP0 Gm24575-201ENSMUST00000175502 77 ntBASIC2.11□□□□□ -2.07
Rnf43Q5NCP0 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Rnf43Q5NCP0 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Rnf43Q5NCP0 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Rnf43Q5NCP0 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Rnf43Q5NCP0 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Rnf43Q5NCP0 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Rnf43Q5NCP0 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Rnf43Q5NCP0 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Rnf43Q5NCP0 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Rnf43Q5NCP0 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Rnf43Q5NCP0 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC2.1□□□□□ -2.07
Rnf43Q5NCP0 Gm22732-201ENSMUST00000158093 121 ntBASIC2.1□□□□□ -2.07
Rnf43Q5NCP0 Gm16539-201ENSMUST00000160086 327 ntBASIC2.1□□□□□ -2.07
Rnf43Q5NCP0 Gm27419-201ENSMUST00000184576 109 ntBASIC2.1□□□□□ -2.07
Rnf43Q5NCP0 Gm23376-201ENSMUST00000082938 160 ntBASIC2.1□□□□□ -2.07
Rnf43Q5NCP0 Mir20b-201ENSMUST00000102087 80 ntBASIC2.09□□□□□ -2.07
Rnf43Q5NCP0 Gm21885-201ENSMUST00000178891 327 ntBASIC2.09□□□□□ -2.07
Rnf43Q5NCP0 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.09□□□□□ -2.07
Rnf43Q5NCP0 Gm26062-201ENSMUST00000083379 107 ntBASIC2.09□□□□□ -2.07
Rnf43Q5NCP0 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.09□□□□□ -2.07
Rnf43Q5NCP0 Gm22048-201ENSMUST00000104721 89 ntBASIC2.08□□□□□ -2.08
Rnf43Q5NCP0 Gm14884-201ENSMUST00000120456 196 ntBASIC2.08□□□□□ -2.08
Rnf43Q5NCP0 Gm25322-201ENSMUST00000122556 104 ntBASIC2.08□□□□□ -2.08
Rnf43Q5NCP0 Gm20305-201ENSMUST00000193226 177 ntBASIC2.08□□□□□ -2.08
Rnf43Q5NCP0 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Rnf43Q5NCP0 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Rnf43Q5NCP0 Gm23785-201ENSMUST00000116741 96 ntBASIC2.07□□□□□ -2.08
Rnf43Q5NCP0 Mir1197-201ENSMUST00000117037 120 ntBASIC2.07□□□□□ -2.08
Rnf43Q5NCP0 Gm24399-201ENSMUST00000157869 74 ntBASIC2.07□□□□□ -2.08
Rnf43Q5NCP0 Gm22727-201ENSMUST00000158090 116 ntBASIC2.07□□□□□ -2.08
Rnf43Q5NCP0 Mir5104-201ENSMUST00000175319 94 ntBASIC2.07□□□□□ -2.08
Rnf43Q5NCP0 Mir3087-201ENSMUST00000199405 56 ntBASIC2.07□□□□□ -2.08
Rnf43Q5NCP0 Gm43865-201ENSMUST00000204721 127 ntBASIC2.07□□□□□ -2.08
Rnf43Q5NCP0 Gm24918-201ENSMUST00000083022 130 ntBASIC2.07□□□□□ -2.08
Rnf43Q5NCP0 Gm23100-201ENSMUST00000083455 141 ntBASIC2.07□□□□□ -2.08
Rnf43Q5NCP0 Snora69-201ENSMUST00000083708 131 ntBASIC2.07□□□□□ -2.08
Rnf43Q5NCP0 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Rnf43Q5NCP0 Mir654-201ENSMUST00000104787 84 ntBASIC2.06□□□□□ -2.08
Rnf43Q5NCP0 Gm24199-201ENSMUST00000157808 136 ntBASIC2.06□□□□□ -2.08
Rnf43Q5NCP0 Mir3061-201ENSMUST00000175129 91 ntBASIC2.06□□□□□ -2.08
Rnf43Q5NCP0 Mir7217-201ENSMUST00000200304 62 ntBASIC2.06□□□□□ -2.08
Rnf43Q5NCP0 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.06□□□□□ -2.08
Rnf43Q5NCP0 Gm22551-201ENSMUST00000157795 103 ntBASIC2.05□□□□□ -2.08
Rnf43Q5NCP0 Gm24223-201ENSMUST00000158827 90 ntBASIC2.05□□□□□ -2.08
Rnf43Q5NCP0 Snora24-201ENSMUST00000174989 130 ntBASIC2.05□□□□□ -2.08
Rnf43Q5NCP0 Gm26154-201ENSMUST00000102339 96 ntBASIC2.04□□□□□ -2.08
Rnf43Q5NCP0 Scarna9-201ENSMUST00000104318 70 ntBASIC2.04□□□□□ -2.08
Rnf43Q5NCP0 Gm24509-201ENSMUST00000157086 101 ntBASIC2.04□□□□□ -2.08
Rnf43Q5NCP0 Gm23172-201ENSMUST00000157160 124 ntBASIC2.04□□□□□ -2.08
Rnf43Q5NCP0 Gm25358-201ENSMUST00000157189 101 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 143.2 ms