Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm24638-201ENSMUST00000179807 132 ntBASIC2.16□□□□□ -2.06
Limch1Q3UH68 Mir7679-201ENSMUST00000183379 63 ntBASIC2.16□□□□□ -2.06
Limch1Q3UH68 mt-Tc-201ENSMUST00000082400 66 ntBASIC2.16□□□□□ -2.06
Limch1Q3UH68 Gm23100-201ENSMUST00000083455 141 ntBASIC2.16□□□□□ -2.06
Limch1Q3UH68 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Limch1Q3UH68 Gm26425-201ENSMUST00000122529 82 ntBASIC2.15□□□□□ -2.07
Limch1Q3UH68 Gm25112-201ENSMUST00000122680 104 ntBASIC2.15□□□□□ -2.07
Limch1Q3UH68 Gm25658-201ENSMUST00000158472 128 ntBASIC2.15□□□□□ -2.07
Limch1Q3UH68 Gm22943-201ENSMUST00000158564 76 ntBASIC2.15□□□□□ -2.07
Limch1Q3UH68 Gm43865-201ENSMUST00000204721 127 ntBASIC2.15□□□□□ -2.07
Limch1Q3UH68 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC2.15□□□□□ -2.07
Limch1Q3UH68 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC2.15□□□□□ -2.07
Limch1Q3UH68 Gm14039-201ENSMUST00000118705 101 ntBASIC2.14□□□□□ -2.07
Limch1Q3UH68 Gm24076-201ENSMUST00000158179 94 ntBASIC2.14□□□□□ -2.07
Limch1Q3UH68 Mir30c-2-201ENSMUST00000083633 84 ntBASIC2.14□□□□□ -2.07
Limch1Q3UH68 Gm23172-201ENSMUST00000157160 124 ntBASIC2.13□□□□□ -2.07
Limch1Q3UH68 Gm24401-201ENSMUST00000157868 91 ntBASIC2.13□□□□□ -2.07
Limch1Q3UH68 Gm22515-201ENSMUST00000158273 305 ntBASIC2.13□□□□□ -2.07
Limch1Q3UH68 Gm22914-201ENSMUST00000175195 77 ntBASIC2.13□□□□□ -2.07
Limch1Q3UH68 Gm22069-201ENSMUST00000179911 107 ntBASIC2.13□□□□□ -2.07
Limch1Q3UH68 Mir7678-201ENSMUST00000185076 71 ntBASIC2.13□□□□□ -2.07
Limch1Q3UH68 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Limch1Q3UH68 Mir301b-201ENSMUST00000102333 97 ntBASIC2.12□□□□□ -2.07
Limch1Q3UH68 Gm25045-201ENSMUST00000122670 99 ntBASIC2.12□□□□□ -2.07
Limch1Q3UH68 Gm25423-201ENSMUST00000157609 107 ntBASIC2.12□□□□□ -2.07
Limch1Q3UH68 AC122769.2-201ENSMUST00000227248 302 ntBASIC2.12□□□□□ -2.07
Limch1Q3UH68 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Limch1Q3UH68 Mir764-201ENSMUST00000103259 108 ntBASIC2.11□□□□□ -2.07
Limch1Q3UH68 Gm24984-201ENSMUST00000104454 133 ntBASIC2.11□□□□□ -2.07
Limch1Q3UH68 Gm22494-201ENSMUST00000104495 128 ntBASIC2.11□□□□□ -2.07
Limch1Q3UH68 Gm22071-201ENSMUST00000116857 83 ntBASIC2.11□□□□□ -2.07
Limch1Q3UH68 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.11□□□□□ -2.07
Limch1Q3UH68 Gm23419-201ENSMUST00000175523 84 ntBASIC2.11□□□□□ -2.07
Limch1Q3UH68 Gm25618-201ENSMUST00000179484 107 ntBASIC2.11□□□□□ -2.07
Limch1Q3UH68 Gm23344-201ENSMUST00000083818 68 ntBASIC2.11□□□□□ -2.07
Limch1Q3UH68 Mir532-201ENSMUST00000093630 96 ntBASIC2.11□□□□□ -2.07
Limch1Q3UH68 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Limch1Q3UH68 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Limch1Q3UH68 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Limch1Q3UH68 Gm15692-201ENSMUST00000152173 352 ntBASIC2.1□□□□□ -2.07
Limch1Q3UH68 Gm16307-201ENSMUST00000161269 210 ntBASIC2.1□□□□□ -2.07
Limch1Q3UH68 Mir7021-201ENSMUST00000197026 63 ntBASIC2.1□□□□□ -2.07
Limch1Q3UH68 Gm45265-201ENSMUST00000210852 2497 ntBASIC2.09□□□□□ -2.07
Limch1Q3UH68 Gm24783-201ENSMUST00000157639 100 ntBASIC2.09□□□□□ -2.07
Limch1Q3UH68 Gm24575-201ENSMUST00000175502 77 ntBASIC2.09□□□□□ -2.07
Limch1Q3UH68 Gm26062-201ENSMUST00000083379 107 ntBASIC2.09□□□□□ -2.07
Limch1Q3UH68 Gm28767-201ENSMUST00000188601 114 ntBASIC2.08□□□□□ -2.08
Limch1Q3UH68 Gm37778-201ENSMUST00000191732 190 ntBASIC2.08□□□□□ -2.08
Limch1Q3UH68 Snord14a-201ENSMUST00000082807 87 ntBASIC2.08□□□□□ -2.08
Limch1Q3UH68 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.07□□□□□ -2.08
Limch1Q3UH68 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Limch1Q3UH68 Gm25832-201ENSMUST00000104140 130 ntBASIC2.06□□□□□ -2.08
Limch1Q3UH68 Gm26358-201ENSMUST00000158215 97 ntBASIC2.06□□□□□ -2.08
Limch1Q3UH68 Gm24223-201ENSMUST00000158827 90 ntBASIC2.06□□□□□ -2.08
Limch1Q3UH68 Gm22887-201ENSMUST00000178586 107 ntBASIC2.06□□□□□ -2.08
Limch1Q3UH68 Gm28862-201ENSMUST00000188246 163 ntBASIC2.06□□□□□ -2.08
Limch1Q3UH68 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Limch1Q3UH68 Scarna9-201ENSMUST00000104318 70 ntBASIC2.05□□□□□ -2.08
Limch1Q3UH68 Gm26290-201ENSMUST00000158891 145 ntBASIC2.05□□□□□ -2.08
Limch1Q3UH68 Gm22802-201ENSMUST00000175621 89 ntBASIC2.05□□□□□ -2.08
Limch1Q3UH68 Mir6237-201ENSMUST00000183808 91 ntBASIC2.05□□□□□ -2.08
Limch1Q3UH68 Gm27365-201ENSMUST00000184041 177 ntBASIC2.05□□□□□ -2.08
Limch1Q3UH68 mt-Tn-201ENSMUST00000082399 71 ntBASIC2.05□□□□□ -2.08
Limch1Q3UH68 Gm24527-201ENSMUST00000082920 107 ntBASIC2.05□□□□□ -2.08
Limch1Q3UH68 Gm24805-201ENSMUST00000082931 104 ntBASIC2.05□□□□□ -2.08
Limch1Q3UH68 Mir410-201ENSMUST00000083563 81 ntBASIC2.05□□□□□ -2.08
Limch1Q3UH68 AC127302.3-201ENSMUST00000215480 2791 ntBASIC2.04□□□□□ -2.08
Limch1Q3UH68 Mir223-201ENSMUST00000102112 110 ntBASIC2.04□□□□□ -2.08
Limch1Q3UH68 Gm23766-201ENSMUST00000103894 80 ntBASIC2.04□□□□□ -2.08
Limch1Q3UH68 Gm25035-201ENSMUST00000175414 77 ntBASIC2.04□□□□□ -2.08
Limch1Q3UH68 Gm22929-201ENSMUST00000175517 107 ntBASIC2.04□□□□□ -2.08
Limch1Q3UH68 Mir544-201ENSMUST00000103813 78 ntBASIC2.03□□□□□ -2.08
Limch1Q3UH68 Gm23170-201ENSMUST00000157158 106 ntBASIC2.03□□□□□ -2.08
Limch1Q3UH68 Gm23917-201ENSMUST00000175256 98 ntBASIC2.03□□□□□ -2.08
Limch1Q3UH68 Gm5900-201ENSMUST00000179862 375 ntBASIC2.03□□□□□ -2.08
Limch1Q3UH68 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC2.03□□□□□ -2.08
Limch1Q3UH68 Gm22761-201ENSMUST00000102278 96 ntBASIC2.02□□□□□ -2.09
Limch1Q3UH68 Gm26080-201ENSMUST00000104069 131 ntBASIC2.02□□□□□ -2.09
Limch1Q3UH68 Mir1191-201ENSMUST00000116883 120 ntBASIC2.02□□□□□ -2.09
Limch1Q3UH68 Gm14884-201ENSMUST00000120456 196 ntBASIC2.02□□□□□ -2.09
Limch1Q3UH68 n-R5s63-201ENSMUST00000122756 103 ntBASIC2.02□□□□□ -2.09
Limch1Q3UH68 Mir7675-201ENSMUST00000184262 58 ntBASIC2.02□□□□□ -2.09
Limch1Q3UH68 Gm25899-201ENSMUST00000082672 141 ntBASIC2.02□□□□□ -2.09
Limch1Q3UH68 Gm24165-201ENSMUST00000082718 128 ntBASIC2.02□□□□□ -2.09
Limch1Q3UH68 Snord1a-201ENSMUST00000083160 74 ntBASIC2.02□□□□□ -2.09
Limch1Q3UH68 U6.1-201ENSMUST00000157443 101 ntBASIC2.01□□□□□ -2.09
Limch1Q3UH68 Gm27511-201ENSMUST00000183502 127 ntBASIC2.01□□□□□ -2.09
Limch1Q3UH68 Mir6995-201ENSMUST00000183658 71 ntBASIC2.01□□□□□ -2.09
Limch1Q3UH68 Gm27419-201ENSMUST00000184576 109 ntBASIC2.01□□□□□ -2.09
Limch1Q3UH68 Gm20108-201ENSMUST00000219977 153 ntBASIC2.01□□□□□ -2.09
Limch1Q3UH68 Gm26441-201ENSMUST00000082590 104 ntBASIC2.01□□□□□ -2.09
Limch1Q3UH68 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
Limch1Q3UH68 Gm23763-201ENSMUST00000158345 60 ntBASIC2□□□□□ -2.09
Limch1Q3UH68 Gm25992-201ENSMUST00000102437 109 ntBASIC1.99□□□□□ -2.09
Limch1Q3UH68 Gm23106-201ENSMUST00000157554 101 ntBASIC1.99□□□□□ -2.09
Limch1Q3UH68 Gm25014-201ENSMUST00000158401 103 ntBASIC1.99□□□□□ -2.09
Limch1Q3UH68 Gm22944-201ENSMUST00000158662 133 ntBASIC1.99□□□□□ -2.09
Limch1Q3UH68 Gm24229-201ENSMUST00000158830 118 ntBASIC1.99□□□□□ -2.09
Limch1Q3UH68 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Limch1Q3UH68 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 129 ms