Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm23306-201ENSMUST00000179058 105 ntBASIC2.29□□□□□ -2.04
Col18a1P39061 AC157278.1-201ENSMUST00000221621 148 ntBASIC2.29□□□□□ -2.04
Col18a1P39061 Gm26062-201ENSMUST00000083379 107 ntBASIC2.29□□□□□ -2.04
Col18a1P39061 Mir34a-201ENSMUST00000083559 102 ntBASIC2.29□□□□□ -2.04
Col18a1P39061 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
Col18a1P39061 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.29□□□□□ -2.04
Col18a1P39061 Gm25279-201ENSMUST00000122608 133 ntBASIC2.28□□□□□ -2.04
Col18a1P39061 Gm22039-201ENSMUST00000157278 132 ntBASIC2.28□□□□□ -2.04
Col18a1P39061 Gm24475-201ENSMUST00000157435 143 ntBASIC2.28□□□□□ -2.04
Col18a1P39061 Gm24154-201ENSMUST00000175261 130 ntBASIC2.28□□□□□ -2.04
Col18a1P39061 Gm23090-201ENSMUST00000177331 78 ntBASIC2.28□□□□□ -2.04
Col18a1P39061 Gm25870-201ENSMUST00000179845 79 ntBASIC2.28□□□□□ -2.04
Col18a1P39061 Gm28647-201ENSMUST00000188416 197 ntBASIC2.28□□□□□ -2.04
Col18a1P39061 Gm44555-201ENSMUST00000209008 148 ntBASIC2.28□□□□□ -2.04
Col18a1P39061 Snora20-201ENSMUST00000082703 128 ntBASIC2.28□□□□□ -2.04
Col18a1P39061 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Col18a1P39061 Gm24342-201ENSMUST00000103907 104 ntBASIC2.28□□□□□ -2.04
Col18a1P39061 Gm22486-201ENSMUST00000116815 137 ntBASIC2.28□□□□□ -2.04
Col18a1P39061 Gm26181-201ENSMUST00000157687 106 ntBASIC2.28□□□□□ -2.04
Col18a1P39061 Gm5224-201ENSMUST00000183060 350 ntBASIC2.28□□□□□ -2.04
Col18a1P39061 Gm42807-201ENSMUST00000200141 329 ntBASIC2.28□□□□□ -2.04
Col18a1P39061 Mir448-201ENSMUST00000083516 112 ntBASIC2.28□□□□□ -2.04
Col18a1P39061 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col18a1P39061 Gm27450-201ENSMUST00000104632 90 ntBASIC2.27□□□□□ -2.05
Col18a1P39061 Gm7209-201ENSMUST00000122339 333 ntBASIC2.27□□□□□ -2.05
Col18a1P39061 Gm26099-201ENSMUST00000157248 109 ntBASIC2.27□□□□□ -2.05
Col18a1P39061 Gm22815-201ENSMUST00000157451 62 ntBASIC2.27□□□□□ -2.05
Col18a1P39061 Gm28435-201ENSMUST00000185496 108 ntBASIC2.27□□□□□ -2.05
Col18a1P39061 Gm28383-201ENSMUST00000187563 139 ntBASIC2.27□□□□□ -2.05
Col18a1P39061 Gm29047-201ENSMUST00000189816 108 ntBASIC2.27□□□□□ -2.05
Col18a1P39061 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.27□□□□□ -2.05
Col18a1P39061 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Col18a1P39061 AC154506.4-201ENSMUST00000224898 3416 ntBASIC2.27□□□□□ -2.05
Col18a1P39061 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col18a1P39061 Gm25609-201ENSMUST00000104019 104 ntBASIC2.26□□□□□ -2.05
Col18a1P39061 Gm11856-201ENSMUST00000118712 276 ntBASIC2.26□□□□□ -2.05
Col18a1P39061 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.26□□□□□ -2.05
Col18a1P39061 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.26□□□□□ -2.05
Col18a1P39061 Gm26150-201ENSMUST00000157426 151 ntBASIC2.26□□□□□ -2.05
Col18a1P39061 Gm25371-201ENSMUST00000158162 101 ntBASIC2.26□□□□□ -2.05
Col18a1P39061 Gm22516-201ENSMUST00000158266 124 ntBASIC2.26□□□□□ -2.05
Col18a1P39061 Gm24880-201ENSMUST00000158776 85 ntBASIC2.26□□□□□ -2.05
Col18a1P39061 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Col18a1P39061 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Col18a1P39061 Gm24547-201ENSMUST00000158649 149 ntBASIC2.26□□□□□ -2.05
Col18a1P39061 Gm25958-201ENSMUST00000175114 71 ntBASIC2.26□□□□□ -2.05
Col18a1P39061 Mir1954-201ENSMUST00000175595 86 ntBASIC2.26□□□□□ -2.05
Col18a1P39061 Mir7052-201ENSMUST00000184821 65 ntBASIC2.26□□□□□ -2.05
Col18a1P39061 Gm44491-201ENSMUST00000196794 96 ntBASIC2.26□□□□□ -2.05
Col18a1P39061 Gm42506-201ENSMUST00000202009 150 ntBASIC2.26□□□□□ -2.05
Col18a1P39061 Gm11356-201ENSMUST00000118974 192 ntBASIC2.25□□□□□ -2.05
Col18a1P39061 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.25□□□□□ -2.05
Col18a1P39061 Gm24000-201ENSMUST00000158063 89 ntBASIC2.25□□□□□ -2.05
Col18a1P39061 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.25□□□□□ -2.05
Col18a1P39061 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
Col18a1P39061 Gm25524-201ENSMUST00000101821 107 ntBASIC2.24□□□□□ -2.05
Col18a1P39061 Gm23470-201ENSMUST00000157129 120 ntBASIC2.24□□□□□ -2.05
Col18a1P39061 Gm26406-201ENSMUST00000158503 124 ntBASIC2.24□□□□□ -2.05
Col18a1P39061 Mir6402-201ENSMUST00000183406 80 ntBASIC2.24□□□□□ -2.05
Col18a1P39061 Gm24311-201ENSMUST00000082570 104 ntBASIC2.24□□□□□ -2.05
Col18a1P39061 Gm25635-201ENSMUST00000082675 131 ntBASIC2.24□□□□□ -2.05
Col18a1P39061 Gm25697-201ENSMUST00000082902 98 ntBASIC2.24□□□□□ -2.05
Col18a1P39061 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Col18a1P39061 Gm15654-201ENSMUST00000152660 300 ntBASIC2.23□□□□□ -2.05
Col18a1P39061 Gm26073-201ENSMUST00000179906 127 ntBASIC2.23□□□□□ -2.05
Col18a1P39061 Mir6240-201ENSMUST00000184281 117 ntBASIC2.23□□□□□ -2.05
Col18a1P39061 Mir6962-201ENSMUST00000199512 63 ntBASIC2.23□□□□□ -2.05
Col18a1P39061 Gm23299-201ENSMUST00000082708 79 ntBASIC2.23□□□□□ -2.05
Col18a1P39061 Gm25014-201ENSMUST00000158401 103 ntBASIC2.23□□□□□ -2.05
Col18a1P39061 Gm25901-201ENSMUST00000158494 130 ntBASIC2.23□□□□□ -2.05
Col18a1P39061 Gm24656-201ENSMUST00000177548 132 ntBASIC2.23□□□□□ -2.05
Col18a1P39061 Gm27419-201ENSMUST00000184576 109 ntBASIC2.23□□□□□ -2.05
Col18a1P39061 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Col18a1P39061 Mir343-201ENSMUST00000102360 75 ntBASIC2.22□□□□□ -2.05
Col18a1P39061 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Col18a1P39061 Gm25183-201ENSMUST00000157752 106 ntBASIC2.22□□□□□ -2.05
Col18a1P39061 Gm25884-201ENSMUST00000157782 62 ntBASIC2.22□□□□□ -2.05
Col18a1P39061 Gm24174-201ENSMUST00000158933 111 ntBASIC2.22□□□□□ -2.05
Col18a1P39061 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Col18a1P39061 Gm44458-201ENSMUST00000196594 143 ntBASIC2.22□□□□□ -2.05
Col18a1P39061 Gm45522-201ENSMUST00000210784 166 ntBASIC2.22□□□□□ -2.05
Col18a1P39061 Gm25899-201ENSMUST00000082672 141 ntBASIC2.22□□□□□ -2.05
Col18a1P39061 Gm22270-201ENSMUST00000104034 132 ntBASIC2.21□□□□□ -2.06
Col18a1P39061 Gm44325-201ENSMUST00000196757 77 ntBASIC2.21□□□□□ -2.06
Col18a1P39061 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC2.21□□□□□ -2.06
Col18a1P39061 Gm25855-201ENSMUST00000082787 72 ntBASIC2.21□□□□□ -2.06
Col18a1P39061 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Col18a1P39061 Mir3098-201ENSMUST00000175416 87 ntBASIC2.21□□□□□ -2.06
Col18a1P39061 Gm22413-201ENSMUST00000175465 85 ntBASIC2.21□□□□□ -2.06
Col18a1P39061 Snord118-201ENSMUST00000082965 135 ntBASIC2.21□□□□□ -2.06
Col18a1P39061 Gm24536-201ENSMUST00000083144 107 ntBASIC2.21□□□□□ -2.06
Col18a1P39061 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Col18a1P39061 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Col18a1P39061 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.2□□□□□ -2.06
Col18a1P39061 Gm24399-201ENSMUST00000157869 74 ntBASIC2.2□□□□□ -2.06
Col18a1P39061 Gm24038-201ENSMUST00000082872 159 ntBASIC2.2□□□□□ -2.06
Col18a1P39061 Gm25186-201ENSMUST00000083909 108 ntBASIC2.2□□□□□ -2.06
Col18a1P39061 Gm22731-201ENSMUST00000158086 94 ntBASIC2.19□□□□□ -2.06
Col18a1P39061 Gm23190-201ENSMUST00000180307 64 ntBASIC2.19□□□□□ -2.06
Col18a1P39061 Gm44462-201ENSMUST00000199696 129 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 176 ms