Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
Hoxd3P09027 Gm23803-201ENSMUST00000104610 132 ntBASIC1.96□□□□□ -2.1
Hoxd3P09027 Gm24075-201ENSMUST00000158175 72 ntBASIC1.96□□□□□ -2.1
Hoxd3P09027 Gm25629-201ENSMUST00000084001 107 ntBASIC1.96□□□□□ -2.1
Hoxd3P09027 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
Hoxd3P09027 Gm24274-201ENSMUST00000116787 124 ntBASIC1.95□□□□□ -2.1
Hoxd3P09027 Gm22486-201ENSMUST00000116815 137 ntBASIC1.95□□□□□ -2.1
Hoxd3P09027 Gm12469-201ENSMUST00000117623 207 ntBASIC1.95□□□□□ -2.1
Hoxd3P09027 Gm23661-201ENSMUST00000122630 87 ntBASIC1.95□□□□□ -2.1
Hoxd3P09027 Gm24648-201ENSMUST00000157111 132 ntBASIC1.95□□□□□ -2.1
Hoxd3P09027 Gm22227-201ENSMUST00000157356 259 ntBASIC1.95□□□□□ -2.1
Hoxd3P09027 Gm43927-201ENSMUST00000204599 117 ntBASIC1.95□□□□□ -2.1
Hoxd3P09027 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.95□□□□□ -2.1
Hoxd3P09027 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Hoxd3P09027 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
Hoxd3P09027 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Hoxd3P09027 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.94□□□□□ -2.1
Hoxd3P09027 Gm23033-201ENSMUST00000157996 134 ntBASIC1.94□□□□□ -2.1
Hoxd3P09027 Gm25552-201ENSMUST00000158081 91 ntBASIC1.94□□□□□ -2.1
Hoxd3P09027 Mir3075-201ENSMUST00000175340 85 ntBASIC1.94□□□□□ -2.1
Hoxd3P09027 Mir7068-201ENSMUST00000183439 74 ntBASIC1.94□□□□□ -2.1
Hoxd3P09027 Snord60-201ENSMUST00000082834 78 ntBASIC1.94□□□□□ -2.1
Hoxd3P09027 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
Hoxd3P09027 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Hoxd3P09027 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Hoxd3P09027 Gm23881-201ENSMUST00000116872 66 ntBASIC1.93□□□□□ -2.1
Hoxd3P09027 Gm23963-201ENSMUST00000179603 77 ntBASIC1.93□□□□□ -2.1
Hoxd3P09027 Mir93-201ENSMUST00000083593 88 ntBASIC1.93□□□□□ -2.1
Hoxd3P09027 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
Hoxd3P09027 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.93□□□□□ -2.1
Hoxd3P09027 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.92□□□□□ -2.1
Hoxd3P09027 Gm25056-201ENSMUST00000157372 62 ntBASIC1.92□□□□□ -2.1
Hoxd3P09027 Gm25866-201ENSMUST00000158245 112 ntBASIC1.92□□□□□ -2.1
Hoxd3P09027 Mir107-201ENSMUST00000083660 87 ntBASIC1.92□□□□□ -2.1
Hoxd3P09027 Gm22866-201ENSMUST00000083947 177 ntBASIC1.92□□□□□ -2.1
Hoxd3P09027 Mir127-201ENSMUST00000093568 70 ntBASIC1.92□□□□□ -2.1
Hoxd3P09027 Gm26154-201ENSMUST00000102339 96 ntBASIC1.91□□□□□ -2.1
Hoxd3P09027 Gm25619-201ENSMUST00000122621 104 ntBASIC1.91□□□□□ -2.1
Hoxd3P09027 Gm24728-201ENSMUST00000158226 125 ntBASIC1.91□□□□□ -2.1
Hoxd3P09027 Gm24221-201ENSMUST00000158833 313 ntBASIC1.91□□□□□ -2.1
Hoxd3P09027 Mir3061-201ENSMUST00000175129 91 ntBASIC1.91□□□□□ -2.1
Hoxd3P09027 Gm22413-201ENSMUST00000175465 85 ntBASIC1.91□□□□□ -2.1
Hoxd3P09027 Gm22887-201ENSMUST00000178586 107 ntBASIC1.91□□□□□ -2.1
Hoxd3P09027 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Hoxd3P09027 Gm23889-201ENSMUST00000122689 104 ntBASIC1.9□□□□□ -2.11
Hoxd3P09027 Gm25622-201ENSMUST00000157217 104 ntBASIC1.9□□□□□ -2.11
Hoxd3P09027 Gm24436-201ENSMUST00000157889 302 ntBASIC1.9□□□□□ -2.11
Hoxd3P09027 Mir7050-201ENSMUST00000184636 60 ntBASIC1.9□□□□□ -2.11
Hoxd3P09027 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Hoxd3P09027 Gm25609-201ENSMUST00000104019 104 ntBASIC1.89□□□□□ -2.11
Hoxd3P09027 Gm26342-201ENSMUST00000104557 129 ntBASIC1.89□□□□□ -2.11
Hoxd3P09027 Gm24009-201ENSMUST00000157734 93 ntBASIC1.89□□□□□ -2.11
Hoxd3P09027 Gm24547-201ENSMUST00000158649 149 ntBASIC1.89□□□□□ -2.11
Hoxd3P09027 Gm26359-201ENSMUST00000158873 101 ntBASIC1.89□□□□□ -2.11
Hoxd3P09027 Gm23477-201ENSMUST00000158882 128 ntBASIC1.89□□□□□ -2.11
Hoxd3P09027 Gm24331-201ENSMUST00000175099 67 ntBASIC1.89□□□□□ -2.11
Hoxd3P09027 Mir5118-201ENSMUST00000175551 67 ntBASIC1.89□□□□□ -2.11
Hoxd3P09027 Gm23801-201ENSMUST00000175561 67 ntBASIC1.89□□□□□ -2.11
Hoxd3P09027 Gm24485-201ENSMUST00000178283 67 ntBASIC1.89□□□□□ -2.11
Hoxd3P09027 Gm37557-201ENSMUST00000191640 139 ntBASIC1.89□□□□□ -2.11
Hoxd3P09027 Mir7021-201ENSMUST00000197026 63 ntBASIC1.89□□□□□ -2.11
Hoxd3P09027 Gm22753-201ENSMUST00000083657 107 ntBASIC1.89□□□□□ -2.11
Hoxd3P09027 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Hoxd3P09027 Snora36b-201ENSMUST00000104383 132 ntBASIC1.88□□□□□ -2.11
Hoxd3P09027 Gm25529-201ENSMUST00000104850 92 ntBASIC1.88□□□□□ -2.11
Hoxd3P09027 Gm25113-201ENSMUST00000157185 143 ntBASIC1.88□□□□□ -2.11
Hoxd3P09027 Gm23600-201ENSMUST00000157260 71 ntBASIC1.88□□□□□ -2.11
Hoxd3P09027 Gm24212-201ENSMUST00000158258 132 ntBASIC1.88□□□□□ -2.11
Hoxd3P09027 Gm22517-201ENSMUST00000158265 136 ntBASIC1.88□□□□□ -2.11
Hoxd3P09027 Gm26029-201ENSMUST00000158659 132 ntBASIC1.88□□□□□ -2.11
Hoxd3P09027 Gm23005-201ENSMUST00000158950 136 ntBASIC1.88□□□□□ -2.11
Hoxd3P09027 Gm25707-201ENSMUST00000175120 96 ntBASIC1.88□□□□□ -2.11
Hoxd3P09027 Gm27369-201ENSMUST00000185182 71 ntBASIC1.88□□□□□ -2.11
Hoxd3P09027 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.88□□□□□ -2.11
Hoxd3P09027 Gm22752-201ENSMUST00000102083 109 ntBASIC1.87□□□□□ -2.11
Hoxd3P09027 Gm25756-201ENSMUST00000103990 136 ntBASIC1.87□□□□□ -2.11
Hoxd3P09027 Gm26015-201ENSMUST00000104402 125 ntBASIC1.87□□□□□ -2.11
Hoxd3P09027 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.87□□□□□ -2.11
Hoxd3P09027 Gm24475-201ENSMUST00000157435 143 ntBASIC1.87□□□□□ -2.11
Hoxd3P09027 Gm23856-201ENSMUST00000158380 99 ntBASIC1.87□□□□□ -2.11
Hoxd3P09027 Gm25368-201ENSMUST00000158847 131 ntBASIC1.87□□□□□ -2.11
Hoxd3P09027 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.87□□□□□ -2.11
Hoxd3P09027 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Hoxd3P09027 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hoxd3P09027 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Hoxd3P09027 Gm24915-201ENSMUST00000157288 78 ntBASIC1.86□□□□□ -2.11
Hoxd3P09027 Gm24401-201ENSMUST00000157868 91 ntBASIC1.86□□□□□ -2.11
Hoxd3P09027 Gm3852-201ENSMUST00000182781 264 ntBASIC1.86□□□□□ -2.11
Hoxd3P09027 Gm27544-201ENSMUST00000185069 155 ntBASIC1.86□□□□□ -2.11
Hoxd3P09027 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.86□□□□□ -2.11
Hoxd3P09027 Gm25636-201ENSMUST00000082666 133 ntBASIC1.86□□□□□ -2.11
Hoxd3P09027 Gm23106-201ENSMUST00000157554 101 ntBASIC1.85□□□□□ -2.11
Hoxd3P09027 Gm25600-201ENSMUST00000158357 106 ntBASIC1.85□□□□□ -2.11
Hoxd3P09027 Gm26158-201ENSMUST00000158973 119 ntBASIC1.85□□□□□ -2.11
Hoxd3P09027 Mir7014-201ENSMUST00000183853 63 ntBASIC1.85□□□□□ -2.11
Hoxd3P09027 Mir6925-201ENSMUST00000197857 70 ntBASIC1.85□□□□□ -2.11
Hoxd3P09027 Gm24044-201ENSMUST00000083107 156 ntBASIC1.85□□□□□ -2.11
Hoxd3P09027 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Hoxd3P09027 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Hoxd3P09027 Gm15692-201ENSMUST00000152173 352 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 184 ms