Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Gm24524-201ENSMUST00000082925 170 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col3a1P08121 Gm25680-201ENSMUST00000116917 126 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Gm22635-201ENSMUST00000116962 126 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Gm23601-201ENSMUST00000157259 131 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Gm24000-201ENSMUST00000158063 89 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Gm24942-201ENSMUST00000158328 114 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Traj61-201ENSMUST00000165025 72 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col3a1P08121 Gm19855-201ENSMUST00000210145 249 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Gm6109-201ENSMUST00000223297 348 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Col3a1P08121 Gm25416-201ENSMUST00000104221 107 ntBASIC1.42□□□□□ -2.18
Col3a1P08121 Gm25787-201ENSMUST00000104709 92 ntBASIC1.42□□□□□ -2.18
Col3a1P08121 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.42□□□□□ -2.18
Col3a1P08121 Snora20-201ENSMUST00000082703 128 ntBASIC1.42□□□□□ -2.18
Col3a1P08121 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.41□□□□□ -2.18
Col3a1P08121 Gm25610-201ENSMUST00000104016 129 ntBASIC1.41□□□□□ -2.18
Col3a1P08121 Gm24946-201ENSMUST00000158332 106 ntBASIC1.41□□□□□ -2.18
Col3a1P08121 Gm22768-201ENSMUST00000158366 153 ntBASIC1.41□□□□□ -2.18
Col3a1P08121 Gm25715-201ENSMUST00000158627 125 ntBASIC1.41□□□□□ -2.18
Col3a1P08121 Gm23369-201ENSMUST00000175406 105 ntBASIC1.41□□□□□ -2.18
Col3a1P08121 Mir6381-201ENSMUST00000183426 87 ntBASIC1.41□□□□□ -2.18
Col3a1P08121 Mir7215-201ENSMUST00000200383 51 ntBASIC1.41□□□□□ -2.18
Col3a1P08121 Gm43865-201ENSMUST00000204721 127 ntBASIC1.41□□□□□ -2.18
Col3a1P08121 AC140930.2-201ENSMUST00000221803 109 ntBASIC1.41□□□□□ -2.18
Col3a1P08121 Gm25382-201ENSMUST00000157811 97 ntBASIC1.4□□□□□ -2.19
Col3a1P08121 Gm22706-201ENSMUST00000157907 112 ntBASIC1.4□□□□□ -2.19
Col3a1P08121 Gm23893-201ENSMUST00000158106 134 ntBASIC1.4□□□□□ -2.19
Col3a1P08121 Gm24668-201ENSMUST00000158935 104 ntBASIC1.4□□□□□ -2.19
Col3a1P08121 Gm26073-201ENSMUST00000179906 127 ntBASIC1.4□□□□□ -2.19
Col3a1P08121 Gm22980-201ENSMUST00000082608 70 ntBASIC1.4□□□□□ -2.19
Col3a1P08121 Gm26109-201ENSMUST00000083970 70 ntBASIC1.4□□□□□ -2.19
Col3a1P08121 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Col3a1P08121 Gm25370-201ENSMUST00000158159 94 ntBASIC1.39□□□□□ -2.19
Col3a1P08121 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC1.39□□□□□ -2.19
Col3a1P08121 Gm3724-201ENSMUST00000197957 349 ntBASIC1.39□□□□□ -2.19
Col3a1P08121 Gm23370-201ENSMUST00000199545 130 ntBASIC1.39□□□□□ -2.19
Col3a1P08121 Gm25357-201ENSMUST00000082745 72 ntBASIC1.39□□□□□ -2.19
Col3a1P08121 Gm25855-201ENSMUST00000082787 72 ntBASIC1.39□□□□□ -2.19
Col3a1P08121 Gm22743-201ENSMUST00000083445 133 ntBASIC1.39□□□□□ -2.19
Col3a1P08121 Mir429-201ENSMUST00000083493 83 ntBASIC1.39□□□□□ -2.19
Col3a1P08121 Gm24445-201ENSMUST00000083981 107 ntBASIC1.39□□□□□ -2.19
Col3a1P08121 n-R5s39-201ENSMUST00000122613 108 ntBASIC1.38□□□□□ -2.19
Col3a1P08121 Mir5619-201ENSMUST00000176065 61 ntBASIC1.38□□□□□ -2.19
Col3a1P08121 Gm25449-201ENSMUST00000179389 79 ntBASIC1.38□□□□□ -2.19
Col3a1P08121 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.38□□□□□ -2.19
Col3a1P08121 Mir490-201ENSMUST00000093567 84 ntBASIC1.38□□□□□ -2.19
Col3a1P08121 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Col3a1P08121 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.37□□□□□ -2.19
Col3a1P08121 Gm24865-201ENSMUST00000103246 96 ntBASIC1.37□□□□□ -2.19
Col3a1P08121 Gm26425-201ENSMUST00000122529 82 ntBASIC1.37□□□□□ -2.19
Col3a1P08121 Gm22815-201ENSMUST00000157451 62 ntBASIC1.37□□□□□ -2.19
Col3a1P08121 Gm23261-201ENSMUST00000158316 136 ntBASIC1.37□□□□□ -2.19
Col3a1P08121 Gm22888-201ENSMUST00000158640 77 ntBASIC1.37□□□□□ -2.19
Col3a1P08121 Mir21c-201ENSMUST00000184910 78 ntBASIC1.37□□□□□ -2.19
Col3a1P08121 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
Col3a1P08121 Gm25992-201ENSMUST00000102437 109 ntBASIC1.37□□□□□ -2.19
Col3a1P08121 Gm25506-201ENSMUST00000104339 70 ntBASIC1.37□□□□□ -2.19
Col3a1P08121 Gm11248-201ENSMUST00000119568 201 ntBASIC1.37□□□□□ -2.19
Col3a1P08121 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.37□□□□□ -2.19
Col3a1P08121 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC1.37□□□□□ -2.19
Col3a1P08121 Gm23838-201ENSMUST00000158067 162 ntBASIC1.37□□□□□ -2.19
Col3a1P08121 Gm44807-201ENSMUST00000206115 154 ntBASIC1.37□□□□□ -2.19
Col3a1P08121 AC132833.2-201ENSMUST00000228699 157 ntBASIC1.37□□□□□ -2.19
Col3a1P08121 Gm24203-201ENSMUST00000082949 114 ntBASIC1.37□□□□□ -2.19
Col3a1P08121 Mir22-201ENSMUST00000083595 95 ntBASIC1.37□□□□□ -2.19
Col3a1P08121 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Col3a1P08121 Gm22672-201ENSMUST00000104414 134 ntBASIC1.36□□□□□ -2.19
Col3a1P08121 Mir880-201ENSMUST00000104809 78 ntBASIC1.36□□□□□ -2.19
Col3a1P08121 Gm15692-201ENSMUST00000152173 352 ntBASIC1.36□□□□□ -2.19
Col3a1P08121 Gm26090-201ENSMUST00000157897 128 ntBASIC1.36□□□□□ -2.19
Col3a1P08121 Gm23351-201ENSMUST00000158427 125 ntBASIC1.36□□□□□ -2.19
Col3a1P08121 Gm25658-201ENSMUST00000158472 128 ntBASIC1.36□□□□□ -2.19
Col3a1P08121 Gm27419-201ENSMUST00000184576 109 ntBASIC1.36□□□□□ -2.19
Col3a1P08121 Gm42795-201ENSMUST00000198847 76 ntBASIC1.36□□□□□ -2.19
Col3a1P08121 Gm24527-201ENSMUST00000082920 107 ntBASIC1.36□□□□□ -2.19
Col3a1P08121 Gm11856-201ENSMUST00000118712 276 ntBASIC1.35□□□□□ -2.19
Col3a1P08121 Gm24851-201ENSMUST00000158028 103 ntBASIC1.35□□□□□ -2.19
Col3a1P08121 Gm22929-201ENSMUST00000175517 107 ntBASIC1.35□□□□□ -2.19
Col3a1P08121 Gm24801-201ENSMUST00000178503 105 ntBASIC1.35□□□□□ -2.19
Col3a1P08121 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.35□□□□□ -2.19
Col3a1P08121 Gm45471-201ENSMUST00000211270 281 ntBASIC1.35□□□□□ -2.19
Col3a1P08121 Gm26123-201ENSMUST00000083363 135 ntBASIC1.35□□□□□ -2.19
Col3a1P08121 Gm45265-201ENSMUST00000210852 2497 ntBASIC1.34□□□□□ -2.19
Col3a1P08121 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Col3a1P08121 Gm24593-201ENSMUST00000122507 106 ntBASIC1.34□□□□□ -2.19
Col3a1P08121 Gm26363-201ENSMUST00000158866 83 ntBASIC1.34□□□□□ -2.19
Col3a1P08121 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.34□□□□□ -2.19
Col3a1P08121 Snord14a-201ENSMUST00000082807 87 ntBASIC1.34□□□□□ -2.19
Col3a1P08121 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.34□□□□□ -2.19
Col3a1P08121 Gm25337-201ENSMUST00000083723 104 ntBASIC1.34□□□□□ -2.19
Col3a1P08121 Mir451a-201ENSMUST00000093557 72 ntBASIC1.34□□□□□ -2.19
Col3a1P08121 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.33□□□□□ -2.2
Col3a1P08121 Mir802-201ENSMUST00000103258 97 ntBASIC1.33□□□□□ -2.2
Col3a1P08121 Gm22485-201ENSMUST00000157990 109 ntBASIC1.33□□□□□ -2.2
Col3a1P08121 Gm22089-201ENSMUST00000158336 102 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 169 ms