Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm23989-201ENSMUST00000117030 66 ntBASIC0.89□□□□□ -2.27
Best1O88870 Gm24379-201ENSMUST00000122695 86 ntBASIC0.89□□□□□ -2.27
Best1O88870 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.89□□□□□ -2.27
Best1O88870 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
Best1O88870 Gm6985-201ENSMUST00000121255 271 ntBASIC0.88□□□□□ -2.27
Best1O88870 Gm25976-201ENSMUST00000158695 130 ntBASIC0.88□□□□□ -2.27
Best1O88870 Gm10548-202ENSMUST00000165672 272 ntBASIC0.88□□□□□ -2.27
Best1O88870 Gm27656-201ENSMUST00000185055 80 ntBASIC0.88□□□□□ -2.27
Best1O88870 Gm15289-201ENSMUST00000117793 244 ntBASIC0.87□□□□□ -2.27
Best1O88870 Gm22451-201ENSMUST00000122803 151 ntBASIC0.87□□□□□ -2.27
Best1O88870 Mir669j-201ENSMUST00000179023 121 ntBASIC0.87□□□□□ -2.27
Best1O88870 Mir7010-201ENSMUST00000183464 63 ntBASIC0.87□□□□□ -2.27
Best1O88870 Gm27668-201ENSMUST00000184188 120 ntBASIC0.87□□□□□ -2.27
Best1O88870 Gm28435-201ENSMUST00000185496 108 ntBASIC0.87□□□□□ -2.27
Best1O88870 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.87□□□□□ -2.27
Best1O88870 Gm25274-201ENSMUST00000104296 135 ntBASIC0.86□□□□□ -2.27
Best1O88870 Gm26091-201ENSMUST00000122704 82 ntBASIC0.86□□□□□ -2.27
Best1O88870 Gm26158-201ENSMUST00000158973 119 ntBASIC0.86□□□□□ -2.27
Best1O88870 Gm25300-201ENSMUST00000175284 84 ntBASIC0.86□□□□□ -2.27
Best1O88870 Gm23340-201ENSMUST00000158955 123 ntBASIC0.85□□□□□ -2.27
Best1O88870 Mir6389-201ENSMUST00000183661 102 ntBASIC0.85□□□□□ -2.27
Best1O88870 Gm26290-201ENSMUST00000158891 145 ntBASIC0.84□□□□□ -2.27
Best1O88870 Gm27587-201ENSMUST00000185116 163 ntBASIC0.84□□□□□ -2.27
Best1O88870 Gm12469-201ENSMUST00000117623 207 ntBASIC0.83□□□□□ -2.28
Best1O88870 Gm24001-201ENSMUST00000158463 85 ntBASIC0.83□□□□□ -2.28
Best1O88870 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.82□□□□□ -2.28
Best1O88870 Mir297a-2-201ENSMUST00000103795 90 ntBASIC0.82□□□□□ -2.28
Best1O88870 Gm25170-201ENSMUST00000104191 129 ntBASIC0.82□□□□□ -2.28
Best1O88870 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.82□□□□□ -2.28
Best1O88870 Gm45492-201ENSMUST00000211611 288 ntBASIC0.82□□□□□ -2.28
Best1O88870 Mir448-201ENSMUST00000083516 112 ntBASIC0.82□□□□□ -2.28
Best1O88870 Mir1191-201ENSMUST00000116883 120 ntBASIC0.81□□□□□ -2.28
Best1O88870 Gm25367-201ENSMUST00000158846 106 ntBASIC0.81□□□□□ -2.28
Best1O88870 Mir100-201ENSMUST00000175270 80 ntBASIC0.81□□□□□ -2.28
Best1O88870 Gm38113-201ENSMUST00000193704 201 ntBASIC0.81□□□□□ -2.28
Best1O88870 Gm25629-201ENSMUST00000084001 107 ntBASIC0.81□□□□□ -2.28
Best1O88870 Mir466b-3-201ENSMUST00000103806 81 ntBASIC0.8□□□□□ -2.28
Best1O88870 Gm25060-201ENSMUST00000157374 130 ntBASIC0.8□□□□□ -2.28
Best1O88870 Gm22966-201ENSMUST00000157957 129 ntBASIC0.8□□□□□ -2.28
Best1O88870 Gm24223-201ENSMUST00000158827 90 ntBASIC0.8□□□□□ -2.28
Best1O88870 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Best1O88870 Gm2077-201ENSMUST00000195017 319 ntBASIC0.8□□□□□ -2.28
Best1O88870 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.8□□□□□ -2.28
Best1O88870 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.8□□□□□ -2.28
Best1O88870 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.8□□□□□ -2.28
Best1O88870 Gm23239-201ENSMUST00000083006 181 ntBASIC0.8□□□□□ -2.28
Best1O88870 Gm22681-201ENSMUST00000083853 106 ntBASIC0.8□□□□□ -2.28
Best1O88870 Snord71-201ENSMUST00000104361 85 ntBASIC0.79□□□□□ -2.28
Best1O88870 Gm24717-201ENSMUST00000157522 124 ntBASIC0.79□□□□□ -2.28
Best1O88870 Gm22522-201ENSMUST00000158271 151 ntBASIC0.79□□□□□ -2.28
Best1O88870 Traj61-201ENSMUST00000165025 72 ntBASIC0.79□□□□□ -2.28
Best1O88870 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Best1O88870 Gm3702-201ENSMUST00000211754 346 ntBASIC0.79□□□□□ -2.28
Best1O88870 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.79□□□□□ -2.28
Best1O88870 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Best1O88870 Gm26412-201ENSMUST00000157666 55 ntBASIC0.78□□□□□ -2.28
Best1O88870 Gm22541-201ENSMUST00000158165 127 ntBASIC0.78□□□□□ -2.28
Best1O88870 Gm23857-201ENSMUST00000158379 111 ntBASIC0.78□□□□□ -2.28
Best1O88870 Gm24129-201ENSMUST00000158537 97 ntBASIC0.78□□□□□ -2.28
Best1O88870 Gm23917-201ENSMUST00000175256 98 ntBASIC0.78□□□□□ -2.28
Best1O88870 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.78□□□□□ -2.28
Best1O88870 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.78□□□□□ -2.28
Best1O88870 Gm22469-201ENSMUST00000104118 133 ntBASIC0.77□□□□□ -2.29
Best1O88870 Gm23260-201ENSMUST00000158317 172 ntBASIC0.77□□□□□ -2.29
Best1O88870 Gm26291-201ENSMUST00000158889 137 ntBASIC0.77□□□□□ -2.29
Best1O88870 Mir3109-201ENSMUST00000175301 88 ntBASIC0.77□□□□□ -2.29
Best1O88870 Gm22775-201ENSMUST00000177630 120 ntBASIC0.77□□□□□ -2.29
Best1O88870 Gm23569-201ENSMUST00000180120 120 ntBASIC0.77□□□□□ -2.29
Best1O88870 Mir200a-201ENSMUST00000083466 90 ntBASIC0.77□□□□□ -2.29
Best1O88870 Gm23651-201ENSMUST00000116755 120 ntBASIC0.76□□□□□ -2.29
Best1O88870 Gm24963-201ENSMUST00000157916 144 ntBASIC0.76□□□□□ -2.29
Best1O88870 Gm22565-201ENSMUST00000175540 69 ntBASIC0.76□□□□□ -2.29
Best1O88870 Gm44470-201ENSMUST00000203913 142 ntBASIC0.76□□□□□ -2.29
Best1O88870 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.76□□□□□ -2.29
Best1O88870 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Best1O88870 Gm22003-201ENSMUST00000101885 107 ntBASIC0.75□□□□□ -2.29
Best1O88870 Gm23410-201ENSMUST00000179967 107 ntBASIC0.75□□□□□ -2.29
Best1O88870 Gm22756-201ENSMUST00000180118 107 ntBASIC0.75□□□□□ -2.29
Best1O88870 Gm23735-201ENSMUST00000082551 134 ntBASIC0.75□□□□□ -2.29
Best1O88870 Gm22505-201ENSMUST00000082956 108 ntBASIC0.75□□□□□ -2.29
Best1O88870 Gm22363-201ENSMUST00000083100 108 ntBASIC0.75□□□□□ -2.29
Best1O88870 Gm23814-201ENSMUST00000083230 102 ntBASIC0.75□□□□□ -2.29
Best1O88870 Gm23095-201ENSMUST00000083446 107 ntBASIC0.75□□□□□ -2.29
Best1O88870 Mir377-201ENSMUST00000083504 68 ntBASIC0.75□□□□□ -2.29
Best1O88870 Gm10351-201ENSMUST00000087694 125 ntBASIC0.75□□□□□ -2.29
Best1O88870 Gm17528-201ENSMUST00000171026 239 ntBASIC0.74□□□□□ -2.29
Best1O88870 Mir6394-201ENSMUST00000184738 99 ntBASIC0.74□□□□□ -2.29
Best1O88870 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.74□□□□□ -2.29
Best1O88870 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Best1O88870 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
Best1O88870 Gm26337-201ENSMUST00000178000 79 ntBASIC0.73□□□□□ -2.29
Best1O88870 Gm22286-201ENSMUST00000179708 107 ntBASIC0.73□□□□□ -2.29
Best1O88870 Gm27289-201ENSMUST00000183341 82 ntBASIC0.73□□□□□ -2.29
Best1O88870 Gm42506-201ENSMUST00000202009 150 ntBASIC0.73□□□□□ -2.29
Best1O88870 Gm25091-201ENSMUST00000103997 71 ntBASIC0.72□□□□□ -2.29
Best1O88870 Gm25693-201ENSMUST00000175443 85 ntBASIC0.72□□□□□ -2.29
Best1O88870 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.72□□□□□ -2.29
Best1O88870 Gm20734-201ENSMUST00000216939 193 ntBASIC0.72□□□□□ -2.29
Best1O88870 Mir10b-201ENSMUST00000083566 68 ntBASIC0.72□□□□□ -2.29
Best1O88870 Mir216a-201ENSMUST00000083605 72 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 1301.8 ms