Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.26□□□□□ -2.45
Trem1Q9JKE2 Gm25895-201ENSMUST00000083714 100 ntBASIC-0.26□□□□□ -2.45
Trem1Q9JKE2 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.27□□□□□ -2.45
Trem1Q9JKE2 Gm22079-201ENSMUST00000157592 106 ntBASIC-0.27□□□□□ -2.45
Trem1Q9JKE2 Gm22836-201ENSMUST00000158441 61 ntBASIC-0.27□□□□□ -2.45
Trem1Q9JKE2 Gm17919-201ENSMUST00000173344 312 ntBASIC-0.27□□□□□ -2.45
Trem1Q9JKE2 Mir7039-201ENSMUST00000183852 85 ntBASIC-0.27□□□□□ -2.45
Trem1Q9JKE2 AC192091.2-201ENSMUST00000217869 117 ntBASIC-0.27□□□□□ -2.45
Trem1Q9JKE2 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.27□□□□□ -2.45
Trem1Q9JKE2 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.27□□□□□ -2.45
Trem1Q9JKE2 Gm23451-201ENSMUST00000083328 122 ntBASIC-0.27□□□□□ -2.45
Trem1Q9JKE2 Mir186-201ENSMUST00000083497 71 ntBASIC-0.27□□□□□ -2.45
Trem1Q9JKE2 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.28□□□□□ -2.45
Trem1Q9JKE2 Gm25720-201ENSMUST00000157503 105 ntBASIC-0.28□□□□□ -2.45
Trem1Q9JKE2 Gm24238-201ENSMUST00000157792 98 ntBASIC-0.28□□□□□ -2.45
Trem1Q9JKE2 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.28□□□□□ -2.45
Trem1Q9JKE2 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.28□□□□□ -2.45
Trem1Q9JKE2 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.28□□□□□ -2.45
Trem1Q9JKE2 Gm23581-201ENSMUST00000158531 63 ntBASIC-0.28□□□□□ -2.45
Trem1Q9JKE2 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.28□□□□□ -2.45
Trem1Q9JKE2 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.28□□□□□ -2.45
Trem1Q9JKE2 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.28□□□□□ -2.45
Trem1Q9JKE2 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.28□□□□□ -2.45
Trem1Q9JKE2 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.28□□□□□ -2.45
Trem1Q9JKE2 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.29□□□□□ -2.46
Trem1Q9JKE2 Gm25496-201ENSMUST00000104430 120 ntBASIC-0.29□□□□□ -2.46
Trem1Q9JKE2 Gm12815-201ENSMUST00000121737 135 ntBASIC-0.29□□□□□ -2.46
Trem1Q9JKE2 Gm22557-201ENSMUST00000157804 102 ntBASIC-0.29□□□□□ -2.46
Trem1Q9JKE2 Gm25247-201ENSMUST00000175475 90 ntBASIC-0.29□□□□□ -2.46
Trem1Q9JKE2 Gm29107-201ENSMUST00000190910 347 ntBASIC-0.29□□□□□ -2.46
Trem1Q9JKE2 Mir7657-201ENSMUST00000196051 57 ntBASIC-0.29□□□□□ -2.46
Trem1Q9JKE2 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.29□□□□□ -2.46
Trem1Q9JKE2 AC134601.1-201ENSMUST00000221058 109 ntBASIC-0.29□□□□□ -2.46
Trem1Q9JKE2 Gm22358-201ENSMUST00000082877 122 ntBASIC-0.29□□□□□ -2.46
Trem1Q9JKE2 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.29□□□□□ -2.46
Trem1Q9JKE2 Gm25188-201ENSMUST00000083913 122 ntBASIC-0.29□□□□□ -2.46
Trem1Q9JKE2 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.3□□□□□ -2.46
Trem1Q9JKE2 Gm25223-201ENSMUST00000158200 110 ntBASIC-0.3□□□□□ -2.46
Trem1Q9JKE2 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.3□□□□□ -2.46
Trem1Q9JKE2 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-0.3□□□□□ -2.46
Trem1Q9JKE2 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-0.3□□□□□ -2.46
Trem1Q9JKE2 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-0.3□□□□□ -2.46
Trem1Q9JKE2 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-0.3□□□□□ -2.46
Trem1Q9JKE2 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-0.3□□□□□ -2.46
Trem1Q9JKE2 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-0.3□□□□□ -2.46
Trem1Q9JKE2 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-0.3□□□□□ -2.46
Trem1Q9JKE2 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-0.3□□□□□ -2.46
Trem1Q9JKE2 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-0.3□□□□□ -2.46
Trem1Q9JKE2 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-0.3□□□□□ -2.46
Trem1Q9JKE2 Mir181a-2-201ENSMUST00000083489 76 ntBASIC-0.3□□□□□ -2.46
Trem1Q9JKE2 Mir214-201ENSMUST00000083582 110 ntBASIC-0.3□□□□□ -2.46
Trem1Q9JKE2 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.3□□□□□ -2.46
Trem1Q9JKE2 Mir489-201ENSMUST00000093599 107 ntBASIC-0.3□□□□□ -2.46
Trem1Q9JKE2 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.31□□□□□ -2.46
Trem1Q9JKE2 Gm25787-201ENSMUST00000104709 92 ntBASIC-0.31□□□□□ -2.46
Trem1Q9JKE2 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC-0.31□□□□□ -2.46
Trem1Q9JKE2 Gm22850-201ENSMUST00000157714 82 ntBASIC-0.31□□□□□ -2.46
Trem1Q9JKE2 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.31□□□□□ -2.46
Trem1Q9JKE2 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.31□□□□□ -2.46
Trem1Q9JKE2 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.31□□□□□ -2.46
Trem1Q9JKE2 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.31□□□□□ -2.46
Trem1Q9JKE2 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.31□□□□□ -2.46
Trem1Q9JKE2 Mir9-2-201ENSMUST00000083490 72 ntBASIC-0.31□□□□□ -2.46
Trem1Q9JKE2 Gm23345-201ENSMUST00000083817 150 ntBASIC-0.31□□□□□ -2.46
Trem1Q9JKE2 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.32□□□□□ -2.46
Trem1Q9JKE2 Gm28020-201ENSMUST00000157739 67 ntBASIC-0.32□□□□□ -2.46
Trem1Q9JKE2 Gm23579-201ENSMUST00000158528 103 ntBASIC-0.32□□□□□ -2.46
Trem1Q9JKE2 Gm22434-201ENSMUST00000158549 122 ntBASIC-0.32□□□□□ -2.46
Trem1Q9JKE2 Gm25161-201ENSMUST00000158913 132 ntBASIC-0.32□□□□□ -2.46
Trem1Q9JKE2 Mir3969-201ENSMUST00000197106 92 ntBASIC-0.32□□□□□ -2.46
Trem1Q9JKE2 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.32□□□□□ -2.46
Trem1Q9JKE2 Gm23140-201ENSMUST00000082487 107 ntBASIC-0.33□□□□□ -2.46
Trem1Q9JKE2 Mir881-201ENSMUST00000104844 78 ntBASIC-0.34□□□□□ -2.46
Trem1Q9JKE2 Gm26279-201ENSMUST00000157095 102 ntBASIC-0.34□□□□□ -2.46
Trem1Q9JKE2 Gm22340-201ENSMUST00000157717 114 ntBASIC-0.34□□□□□ -2.46
Trem1Q9JKE2 Gm23278-201ENSMUST00000157911 143 ntBASIC-0.34□□□□□ -2.46
Trem1Q9JKE2 Gm25329-201ENSMUST00000158041 126 ntBASIC-0.34□□□□□ -2.46
Trem1Q9JKE2 Gm22946-201ENSMUST00000158558 82 ntBASIC-0.34□□□□□ -2.46
Trem1Q9JKE2 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
Trem1Q9JKE2 Gm24288-201ENSMUST00000157630 144 ntBASIC-0.35□□□□□ -2.47
Trem1Q9JKE2 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.35□□□□□ -2.47
Trem1Q9JKE2 Gm23180-201ENSMUST00000158686 125 ntBASIC-0.35□□□□□ -2.47
Trem1Q9JKE2 Gm23020-201ENSMUST00000158766 253 ntBASIC-0.35□□□□□ -2.47
Trem1Q9JKE2 Gm24223-201ENSMUST00000158827 90 ntBASIC-0.35□□□□□ -2.47
Trem1Q9JKE2 Gm26360-201ENSMUST00000158872 103 ntBASIC-0.35□□□□□ -2.47
Trem1Q9JKE2 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.35□□□□□ -2.47
Trem1Q9JKE2 Gm38019-201ENSMUST00000195133 380 ntBASIC-0.35□□□□□ -2.47
Trem1Q9JKE2 Gm44989-201ENSMUST00000204749 217 ntBASIC-0.35□□□□□ -2.47
Trem1Q9JKE2 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
Trem1Q9JKE2 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
Trem1Q9JKE2 Gm23708-201ENSMUST00000104367 123 ntBASIC-0.36□□□□□ -2.47
Trem1Q9JKE2 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.36□□□□□ -2.47
Trem1Q9JKE2 Gm14883-201ENSMUST00000120179 157 ntBASIC-0.36□□□□□ -2.47
Trem1Q9JKE2 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.36□□□□□ -2.47
Trem1Q9JKE2 Gm25015-201ENSMUST00000158400 128 ntBASIC-0.36□□□□□ -2.47
Trem1Q9JKE2 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.36□□□□□ -2.47
Trem1Q9JKE2 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.36□□□□□ -2.47
Trem1Q9JKE2 Mir8116-201ENSMUST00000184134 97 ntBASIC-0.36□□□□□ -2.47
Trem1Q9JKE2 Gm44373-201ENSMUST00000196112 169 ntBASIC-0.36□□□□□ -2.47
Trem1Q9JKE2 Gm45859-201ENSMUST00000212794 214 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 256.8 ms