Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.65□□□□□ -2.31
Scn5aQ9JJV9 Gm26076-201ENSMUST00000104065 105 ntBASIC0.64□□□□□ -2.31
Scn5aQ9JJV9 Gm22999-201ENSMUST00000157082 88 ntBASIC0.64□□□□□ -2.31
Scn5aQ9JJV9 Gm22139-201ENSMUST00000158747 105 ntBASIC0.64□□□□□ -2.31
Scn5aQ9JJV9 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.64□□□□□ -2.31
Scn5aQ9JJV9 Gm37545-201ENSMUST00000186512 148 ntBASIC0.64□□□□□ -2.31
Scn5aQ9JJV9 Gm44807-201ENSMUST00000206115 154 ntBASIC0.64□□□□□ -2.31
Scn5aQ9JJV9 Gm23461-201ENSMUST00000083265 107 ntBASIC0.64□□□□□ -2.31
Scn5aQ9JJV9 Gm24258-201ENSMUST00000083739 133 ntBASIC0.64□□□□□ -2.31
Scn5aQ9JJV9 Gm25316-201ENSMUST00000116826 118 ntBASIC0.64□□□□□ -2.31
Scn5aQ9JJV9 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.64□□□□□ -2.31
Scn5aQ9JJV9 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.64□□□□□ -2.31
Scn5aQ9JJV9 Mir30a-201ENSMUST00000083471 71 ntBASIC0.64□□□□□ -2.31
Scn5aQ9JJV9 Gm25378-201ENSMUST00000104333 129 ntBASIC0.63□□□□□ -2.31
Scn5aQ9JJV9 Gm23203-201ENSMUST00000104374 107 ntBASIC0.63□□□□□ -2.31
Scn5aQ9JJV9 Gm22340-201ENSMUST00000157717 114 ntBASIC0.63□□□□□ -2.31
Scn5aQ9JJV9 Mir1966-201ENSMUST00000158807 108 ntBASIC0.63□□□□□ -2.31
Scn5aQ9JJV9 Gm44922-201ENSMUST00000206690 90 ntBASIC0.63□□□□□ -2.31
Scn5aQ9JJV9 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
Scn5aQ9JJV9 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.63□□□□□ -2.31
Scn5aQ9JJV9 Gm25610-201ENSMUST00000104016 129 ntBASIC0.62□□□□□ -2.31
Scn5aQ9JJV9 Gm24728-201ENSMUST00000158226 125 ntBASIC0.62□□□□□ -2.31
Scn5aQ9JJV9 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC0.62□□□□□ -2.31
Scn5aQ9JJV9 Mir532-201ENSMUST00000093630 96 ntBASIC0.62□□□□□ -2.31
Scn5aQ9JJV9 Gm23947-201ENSMUST00000093636 107 ntBASIC0.62□□□□□ -2.31
Scn5aQ9JJV9 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Scn5aQ9JJV9 Gm25968-201ENSMUST00000157167 100 ntBASIC0.62□□□□□ -2.31
Scn5aQ9JJV9 Gm23253-201ENSMUST00000157441 104 ntBASIC0.62□□□□□ -2.31
Scn5aQ9JJV9 Gm24772-201ENSMUST00000158507 110 ntBASIC0.62□□□□□ -2.31
Scn5aQ9JJV9 Gm24106-201ENSMUST00000175498 127 ntBASIC0.62□□□□□ -2.31
Scn5aQ9JJV9 Gm43749-201ENSMUST00000199345 352 ntBASIC0.62□□□□□ -2.31
Scn5aQ9JJV9 AC168880.2-201ENSMUST00000224488 201 ntBASIC0.62□□□□□ -2.31
Scn5aQ9JJV9 Gm26225-201ENSMUST00000082508 135 ntBASIC0.62□□□□□ -2.31
Scn5aQ9JJV9 Gm24250-201ENSMUST00000157320 135 ntBASIC0.61□□□□□ -2.31
Scn5aQ9JJV9 Gm24238-201ENSMUST00000157792 98 ntBASIC0.61□□□□□ -2.31
Scn5aQ9JJV9 Gm23859-201ENSMUST00000158383 64 ntBASIC0.61□□□□□ -2.31
Scn5aQ9JJV9 Gm22699-201ENSMUST00000175376 105 ntBASIC0.61□□□□□ -2.31
Scn5aQ9JJV9 Gm23770-201ENSMUST00000178009 108 ntBASIC0.61□□□□□ -2.31
Scn5aQ9JJV9 Gm22832-201ENSMUST00000178022 108 ntBASIC0.61□□□□□ -2.31
Scn5aQ9JJV9 Gm23863-201ENSMUST00000178265 108 ntBASIC0.61□□□□□ -2.31
Scn5aQ9JJV9 Gm24828-201ENSMUST00000178507 108 ntBASIC0.61□□□□□ -2.31
Scn5aQ9JJV9 Gm23052-201ENSMUST00000178633 108 ntBASIC0.61□□□□□ -2.31
Scn5aQ9JJV9 Gm25729-201ENSMUST00000179050 108 ntBASIC0.61□□□□□ -2.31
Scn5aQ9JJV9 Gm25359-201ENSMUST00000179315 108 ntBASIC0.61□□□□□ -2.31
Scn5aQ9JJV9 Gm22624-201ENSMUST00000179913 108 ntBASIC0.61□□□□□ -2.31
Scn5aQ9JJV9 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Scn5aQ9JJV9 Gm22544-201ENSMUST00000104349 127 ntBASIC0.6□□□□□ -2.31
Scn5aQ9JJV9 Gm22815-201ENSMUST00000157451 62 ntBASIC0.6□□□□□ -2.31
Scn5aQ9JJV9 Gm24467-201ENSMUST00000157887 126 ntBASIC0.6□□□□□ -2.31
Scn5aQ9JJV9 Gm18665-201ENSMUST00000189783 270 ntBASIC0.6□□□□□ -2.31
Scn5aQ9JJV9 Gm24381-201ENSMUST00000122697 104 ntBASIC0.6□□□□□ -2.31
Scn5aQ9JJV9 Gm22079-201ENSMUST00000157592 106 ntBASIC0.6□□□□□ -2.31
Scn5aQ9JJV9 Gm24020-201ENSMUST00000180156 108 ntBASIC0.6□□□□□ -2.31
Scn5aQ9JJV9 DQ267101-201ENSMUST00000082562 73 ntBASIC0.6□□□□□ -2.31
Scn5aQ9JJV9 Gm24232-201ENSMUST00000104314 132 ntBASIC0.59□□□□□ -2.31
Scn5aQ9JJV9 Gm23988-201ENSMUST00000117034 122 ntBASIC0.59□□□□□ -2.31
Scn5aQ9JJV9 Gm24747-201ENSMUST00000157835 87 ntBASIC0.59□□□□□ -2.31
Scn5aQ9JJV9 Gm24131-201ENSMUST00000158539 107 ntBASIC0.59□□□□□ -2.31
Scn5aQ9JJV9 Gm23209-201ENSMUST00000158667 110 ntBASIC0.59□□□□□ -2.31
Scn5aQ9JJV9 Gm44396-201ENSMUST00000199843 114 ntBASIC0.59□□□□□ -2.31
Scn5aQ9JJV9 Mir224-201ENSMUST00000083608 82 ntBASIC0.59□□□□□ -2.31
Scn5aQ9JJV9 Mir1899-201ENSMUST00000122798 96 ntBASIC0.59□□□□□ -2.32
Scn5aQ9JJV9 Gm26236-201ENSMUST00000175536 137 ntBASIC0.59□□□□□ -2.32
Scn5aQ9JJV9 Gm26084-201ENSMUST00000157903 104 ntBASIC0.58□□□□□ -2.32
Scn5aQ9JJV9 Mir411-201ENSMUST00000083543 82 ntBASIC0.58□□□□□ -2.32
Scn5aQ9JJV9 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.58□□□□□ -2.32
Scn5aQ9JJV9 Gm22786-201ENSMUST00000104086 122 ntBASIC0.57□□□□□ -2.32
Scn5aQ9JJV9 Gm26484-201ENSMUST00000158018 106 ntBASIC0.57□□□□□ -2.32
Scn5aQ9JJV9 Mir1933-201ENSMUST00000158930 88 ntBASIC0.57□□□□□ -2.32
Scn5aQ9JJV9 Gm27993-201ENSMUST00000184362 85 ntBASIC0.57□□□□□ -2.32
Scn5aQ9JJV9 Gm23990-201ENSMUST00000117031 117 ntBASIC0.57□□□□□ -2.32
Scn5aQ9JJV9 Gm6272-201ENSMUST00000121256 171 ntBASIC0.57□□□□□ -2.32
Scn5aQ9JJV9 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.56□□□□□ -2.32
Scn5aQ9JJV9 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.56□□□□□ -2.32
Scn5aQ9JJV9 Gm17528-201ENSMUST00000171026 239 ntBASIC0.56□□□□□ -2.32
Scn5aQ9JJV9 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.56□□□□□ -2.32
Scn5aQ9JJV9 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.56□□□□□ -2.32
Scn5aQ9JJV9 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Scn5aQ9JJV9 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.56□□□□□ -2.32
Scn5aQ9JJV9 Mir377-201ENSMUST00000083504 68 ntBASIC0.56□□□□□ -2.32
Scn5aQ9JJV9 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.56□□□□□ -2.32
Scn5aQ9JJV9 Mir695-201ENSMUST00000102261 109 ntBASIC0.55□□□□□ -2.32
Scn5aQ9JJV9 Gm24555-201ENSMUST00000104548 124 ntBASIC0.55□□□□□ -2.32
Scn5aQ9JJV9 Gm22048-201ENSMUST00000104721 89 ntBASIC0.55□□□□□ -2.32
Scn5aQ9JJV9 Gm24288-201ENSMUST00000157630 144 ntBASIC0.55□□□□□ -2.32
Scn5aQ9JJV9 Gm23337-201ENSMUST00000158959 118 ntBASIC0.55□□□□□ -2.32
Scn5aQ9JJV9 Gm17020-201ENSMUST00000172274 274 ntBASIC0.55□□□□□ -2.32
Scn5aQ9JJV9 Gm22348-201ENSMUST00000178674 79 ntBASIC0.55□□□□□ -2.32
Scn5aQ9JJV9 Gm38323-201ENSMUST00000192450 210 ntBASIC0.55□□□□□ -2.32
Scn5aQ9JJV9 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Scn5aQ9JJV9 Gm23303-201ENSMUST00000082714 152 ntBASIC0.55□□□□□ -2.32
Scn5aQ9JJV9 Gm25138-201ENSMUST00000083248 136 ntBASIC0.55□□□□□ -2.32
Scn5aQ9JJV9 Gm22753-201ENSMUST00000083657 107 ntBASIC0.55□□□□□ -2.32
Scn5aQ9JJV9 Gm10813-201ENSMUST00000099936 90 ntBASIC0.55□□□□□ -2.32
Scn5aQ9JJV9 Gm22105-201ENSMUST00000116734 116 ntBASIC0.55□□□□□ -2.32
Scn5aQ9JJV9 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Scn5aQ9JJV9 Gm25375-201ENSMUST00000158157 135 ntBASIC0.55□□□□□ -2.32
Scn5aQ9JJV9 Gm24054-201ENSMUST00000158619 105 ntBASIC0.55□□□□□ -2.32
Scn5aQ9JJV9 Mir7077-201ENSMUST00000183991 57 ntBASIC0.55□□□□□ -2.32
Scn5aQ9JJV9 Gm43944-201ENSMUST00000205220 120 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms