Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm26274-201ENSMUST00000157103 321 ntBASIC1.04□□□□□ -2.24
Trim54Q9ERP3 Gm44458-201ENSMUST00000196594 143 ntBASIC1.04□□□□□ -2.24
Trim54Q9ERP3 Gm43749-201ENSMUST00000199345 352 ntBASIC1.04□□□□□ -2.24
Trim54Q9ERP3 AC165138.1-201ENSMUST00000226984 270 ntBASIC1.04□□□□□ -2.24
Trim54Q9ERP3 Gm23140-201ENSMUST00000082487 107 ntBASIC1.04□□□□□ -2.24
Trim54Q9ERP3 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Trim54Q9ERP3 Gm14946-201ENSMUST00000119859 296 ntBASIC1.03□□□□□ -2.24
Trim54Q9ERP3 Gm23893-201ENSMUST00000158106 134 ntBASIC1.03□□□□□ -2.24
Trim54Q9ERP3 Gm18502-201ENSMUST00000218679 199 ntBASIC1.03□□□□□ -2.24
Trim54Q9ERP3 Gm26358-201ENSMUST00000158215 97 ntBASIC1.02□□□□□ -2.25
Trim54Q9ERP3 Gm20409-201ENSMUST00000173457 130 ntBASIC1.02□□□□□ -2.25
Trim54Q9ERP3 Gm22887-201ENSMUST00000178586 107 ntBASIC1.02□□□□□ -2.25
Trim54Q9ERP3 Gm20118-201ENSMUST00000187207 162 ntBASIC1.02□□□□□ -2.25
Trim54Q9ERP3 Gm44807-201ENSMUST00000206115 154 ntBASIC1.02□□□□□ -2.25
Trim54Q9ERP3 Gm10172-201ENSMUST00000085929 558 ntBASIC1.02□□□□□ -2.25
Trim54Q9ERP3 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Trim54Q9ERP3 Mir3079-201ENSMUST00000175428 90 ntBASIC1.01□□□□□ -2.25
Trim54Q9ERP3 Gm27974-201ENSMUST00000183415 105 ntBASIC1.01□□□□□ -2.25
Trim54Q9ERP3 Mir532-201ENSMUST00000093630 96 ntBASIC1.01□□□□□ -2.25
Trim54Q9ERP3 Gm26011-201ENSMUST00000104410 104 ntBASIC1□□□□□ -2.25
Trim54Q9ERP3 Gm25110-201ENSMUST00000116684 121 ntBASIC1□□□□□ -2.25
Trim54Q9ERP3 Gm25775-201ENSMUST00000116716 121 ntBASIC1□□□□□ -2.25
Trim54Q9ERP3 Gm24795-201ENSMUST00000116737 121 ntBASIC1□□□□□ -2.25
Trim54Q9ERP3 Gm25171-201ENSMUST00000116926 121 ntBASIC1□□□□□ -2.25
Trim54Q9ERP3 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1□□□□□ -2.25
Trim54Q9ERP3 Mir6380-201ENSMUST00000184334 81 ntBASIC1□□□□□ -2.25
Trim54Q9ERP3 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1□□□□□ -2.25
Trim54Q9ERP3 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC1□□□□□ -2.25
Trim54Q9ERP3 AC151902.2-201ENSMUST00000226419 301 ntBASIC1□□□□□ -2.25
Trim54Q9ERP3 Gm23445-201ENSMUST00000082800 107 ntBASIC1□□□□□ -2.25
Trim54Q9ERP3 Mir10b-201ENSMUST00000083566 68 ntBASIC1□□□□□ -2.25
Trim54Q9ERP3 Gm25683-201ENSMUST00000083940 131 ntBASIC1□□□□□ -2.25
Trim54Q9ERP3 Gm23991-201ENSMUST00000117033 93 ntBASIC0.99□□□□□ -2.25
Trim54Q9ERP3 Gm15654-201ENSMUST00000152660 300 ntBASIC0.99□□□□□ -2.25
Trim54Q9ERP3 Gm25968-201ENSMUST00000157167 100 ntBASIC0.99□□□□□ -2.25
Trim54Q9ERP3 Mir3094-201ENSMUST00000175121 64 ntBASIC0.99□□□□□ -2.25
Trim54Q9ERP3 Gm38323-201ENSMUST00000192450 210 ntBASIC0.99□□□□□ -2.25
Trim54Q9ERP3 AC168880.2-201ENSMUST00000224488 201 ntBASIC0.99□□□□□ -2.25
Trim54Q9ERP3 Gm23509-201ENSMUST00000083080 160 ntBASIC0.99□□□□□ -2.25
Trim54Q9ERP3 Snord35a-201ENSMUST00000083884 90 ntBASIC0.99□□□□□ -2.25
Trim54Q9ERP3 Gm22469-201ENSMUST00000104118 133 ntBASIC0.98□□□□□ -2.25
Trim54Q9ERP3 Gm24547-201ENSMUST00000158649 149 ntBASIC0.98□□□□□ -2.25
Trim54Q9ERP3 Mir1933-201ENSMUST00000158930 88 ntBASIC0.98□□□□□ -2.25
Trim54Q9ERP3 Gm24020-201ENSMUST00000180156 108 ntBASIC0.98□□□□□ -2.25
Trim54Q9ERP3 Gm28767-201ENSMUST00000188601 114 ntBASIC0.98□□□□□ -2.25
Trim54Q9ERP3 Mir7657-201ENSMUST00000196051 57 ntBASIC0.98□□□□□ -2.25
Trim54Q9ERP3 Mir30f-201ENSMUST00000196073 92 ntBASIC0.98□□□□□ -2.25
Trim54Q9ERP3 Gm24431-201ENSMUST00000104073 66 ntBASIC0.97□□□□□ -2.25
Trim54Q9ERP3 Gm14039-201ENSMUST00000118705 101 ntBASIC0.97□□□□□ -2.25
Trim54Q9ERP3 Gm11248-201ENSMUST00000119568 201 ntBASIC0.97□□□□□ -2.25
Trim54Q9ERP3 Gm24728-201ENSMUST00000158226 125 ntBASIC0.97□□□□□ -2.25
Trim54Q9ERP3 Gm25901-201ENSMUST00000158494 130 ntBASIC0.97□□□□□ -2.25
Trim54Q9ERP3 Mir15a-201ENSMUST00000175266 84 ntBASIC0.97□□□□□ -2.25
Trim54Q9ERP3 Gm27587-201ENSMUST00000185116 163 ntBASIC0.97□□□□□ -2.25
Trim54Q9ERP3 Gm25797-201ENSMUST00000082640 107 ntBASIC0.97□□□□□ -2.25
Trim54Q9ERP3 Gm24461-201ENSMUST00000082735 103 ntBASIC0.97□□□□□ -2.25
Trim54Q9ERP3 Gm25787-201ENSMUST00000104709 92 ntBASIC0.96□□□□□ -2.26
Trim54Q9ERP3 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.96□□□□□ -2.26
Trim54Q9ERP3 DQ267101-201ENSMUST00000082562 73 ntBASIC0.96□□□□□ -2.26
Trim54Q9ERP3 Mir30a-201ENSMUST00000083471 71 ntBASIC0.96□□□□□ -2.26
Trim54Q9ERP3 Mir669b-201ENSMUST00000102172 97 ntBASIC0.95□□□□□ -2.26
Trim54Q9ERP3 Gm24263-201ENSMUST00000104059 107 ntBASIC0.95□□□□□ -2.26
Trim54Q9ERP3 Gm14626-201ENSMUST00000117619 216 ntBASIC0.95□□□□□ -2.26
Trim54Q9ERP3 Gm23504-201ENSMUST00000158988 95 ntBASIC0.95□□□□□ -2.26
Trim54Q9ERP3 Gm43944-201ENSMUST00000205220 120 ntBASIC0.95□□□□□ -2.26
Trim54Q9ERP3 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.95□□□□□ -2.26
Trim54Q9ERP3 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.95□□□□□ -2.26
Trim54Q9ERP3 Gm23722-201ENSMUST00000083002 130 ntBASIC0.95□□□□□ -2.26
Trim54Q9ERP3 Mir33-201ENSMUST00000083531 69 ntBASIC0.95□□□□□ -2.26
Trim54Q9ERP3 Scarna9-201ENSMUST00000104318 70 ntBASIC0.94□□□□□ -2.26
Trim54Q9ERP3 Gm24288-201ENSMUST00000157630 144 ntBASIC0.94□□□□□ -2.26
Trim54Q9ERP3 Snord32a-201ENSMUST00000083285 83 ntBASIC0.94□□□□□ -2.26
Trim54Q9ERP3 Mir297a-2-201ENSMUST00000103795 90 ntBASIC0.93□□□□□ -2.26
Trim54Q9ERP3 Gm25544-201ENSMUST00000122676 120 ntBASIC0.93□□□□□ -2.26
Trim54Q9ERP3 Gm24575-201ENSMUST00000175502 77 ntBASIC0.93□□□□□ -2.26
Trim54Q9ERP3 Mir6369-201ENSMUST00000183772 106 ntBASIC0.93□□□□□ -2.26
Trim54Q9ERP3 Gm25081-201ENSMUST00000082534 108 ntBASIC0.93□□□□□ -2.26
Trim54Q9ERP3 Gm24527-201ENSMUST00000082920 107 ntBASIC0.93□□□□□ -2.26
Trim54Q9ERP3 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Trim54Q9ERP3 Gm23253-201ENSMUST00000157441 104 ntBASIC0.92□□□□□ -2.26
Trim54Q9ERP3 Mir6390-201ENSMUST00000184405 129 ntBASIC0.92□□□□□ -2.26
Trim54Q9ERP3 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.92□□□□□ -2.26
Trim54Q9ERP3 Mir101a-201ENSMUST00000083517 83 ntBASIC0.92□□□□□ -2.26
Trim54Q9ERP3 Gm24141-201ENSMUST00000122776 115 ntBASIC0.91□□□□□ -2.26
Trim54Q9ERP3 Gm26084-201ENSMUST00000157903 104 ntBASIC0.91□□□□□ -2.26
Trim54Q9ERP3 Gm25444-201ENSMUST00000158999 113 ntBASIC0.91□□□□□ -2.26
Trim54Q9ERP3 Gm22466-201ENSMUST00000175278 69 ntBASIC0.91□□□□□ -2.26
Trim54Q9ERP3 Mir500-201ENSMUST00000093600 92 ntBASIC0.91□□□□□ -2.26
Trim54Q9ERP3 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
Trim54Q9ERP3 Mir20b-201ENSMUST00000102087 80 ntBASIC0.9□□□□□ -2.27
Trim54Q9ERP3 Gm24246-201ENSMUST00000157315 132 ntBASIC0.9□□□□□ -2.27
Trim54Q9ERP3 Gm38274-201ENSMUST00000195689 148 ntBASIC0.9□□□□□ -2.27
Trim54Q9ERP3 Gm24718-201ENSMUST00000157521 136 ntBASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Gm24549-201ENSMUST00000158647 139 ntBASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.89□□□□□ -2.27
Trim54Q9ERP3 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.89□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 165.4 ms