Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.44□□□□□ -2.48
Rpap1Q80TE0 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.44□□□□□ -2.48
Rpap1Q80TE0 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.44□□□□□ -2.48
Rpap1Q80TE0 AC153526.1-201ENSMUST00000219750 190 ntBASIC-0.44□□□□□ -2.48
Rpap1Q80TE0 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.44□□□□□ -2.48
Rpap1Q80TE0 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.45□□□□□ -2.48
Rpap1Q80TE0 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.45□□□□□ -2.48
Rpap1Q80TE0 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.45□□□□□ -2.48
Rpap1Q80TE0 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.45□□□□□ -2.48
Rpap1Q80TE0 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.46□□□□□ -2.48
Rpap1Q80TE0 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.46□□□□□ -2.48
Rpap1Q80TE0 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.46□□□□□ -2.48
Rpap1Q80TE0 Gm37313-201ENSMUST00000191673 290 ntBASIC-0.46□□□□□ -2.48
Rpap1Q80TE0 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.46□□□□□ -2.48
Rpap1Q80TE0 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.47□□□□□ -2.48
Rpap1Q80TE0 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.47□□□□□ -2.48
Rpap1Q80TE0 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-0.47□□□□□ -2.48
Rpap1Q80TE0 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.47□□□□□ -2.48
Rpap1Q80TE0 Gm24737-201ENSMUST00000158861 100 ntBASIC-0.47□□□□□ -2.48
Rpap1Q80TE0 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.47□□□□□ -2.48
Rpap1Q80TE0 Mir5624-201ENSMUST00000176635 61 ntBASIC-0.47□□□□□ -2.48
Rpap1Q80TE0 Gm22448-201ENSMUST00000179254 107 ntBASIC-0.47□□□□□ -2.48
Rpap1Q80TE0 Gm24761-201ENSMUST00000179589 127 ntBASIC-0.47□□□□□ -2.48
Rpap1Q80TE0 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.47□□□□□ -2.48
Rpap1Q80TE0 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.47□□□□□ -2.48
Rpap1Q80TE0 Gm23941-201ENSMUST00000101953 107 ntBASIC-0.47□□□□□ -2.49
Rpap1Q80TE0 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.47□□□□□ -2.49
Rpap1Q80TE0 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.47□□□□□ -2.49
Rpap1Q80TE0 Gm22332-201ENSMUST00000158072 126 ntBASIC-0.47□□□□□ -2.49
Rpap1Q80TE0 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.47□□□□□ -2.49
Rpap1Q80TE0 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.47□□□□□ -2.49
Rpap1Q80TE0 Gm28008-201ENSMUST00000184021 186 ntBASIC-0.47□□□□□ -2.49
Rpap1Q80TE0 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.47□□□□□ -2.49
Rpap1Q80TE0 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC-0.47□□□□□ -2.49
Rpap1Q80TE0 AC154552.1-201ENSMUST00000222969 202 ntBASIC-0.47□□□□□ -2.49
Rpap1Q80TE0 Gm25588-201ENSMUST00000082501 140 ntBASIC-0.47□□□□□ -2.49
Rpap1Q80TE0 Mir181a-1-201ENSMUST00000083631 87 ntBASIC-0.47□□□□□ -2.49
Rpap1Q80TE0 Mir218-1-201ENSMUST00000083669 110 ntBASIC-0.47□□□□□ -2.49
Rpap1Q80TE0 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
Rpap1Q80TE0 Snord100-201ENSMUST00000116836 74 ntBASIC-0.48□□□□□ -2.49
Rpap1Q80TE0 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.48□□□□□ -2.49
Rpap1Q80TE0 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.48□□□□□ -2.49
Rpap1Q80TE0 Mir327-201ENSMUST00000199328 69 ntBASIC-0.48□□□□□ -2.49
Rpap1Q80TE0 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC-0.48□□□□□ -2.49
Rpap1Q80TE0 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.48□□□□□ -2.49
Rpap1Q80TE0 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
Rpap1Q80TE0 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.48□□□□□ -2.49
Rpap1Q80TE0 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.48□□□□□ -2.49
Rpap1Q80TE0 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.48□□□□□ -2.49
Rpap1Q80TE0 Gm24423-201ENSMUST00000101982 106 ntBASIC-0.49□□□□□ -2.49
Rpap1Q80TE0 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.49□□□□□ -2.49
Rpap1Q80TE0 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.49□□□□□ -2.49
Rpap1Q80TE0 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
Rpap1Q80TE0 Gm37404-201ENSMUST00000195726 359 ntBASIC-0.49□□□□□ -2.49
Rpap1Q80TE0 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC-0.49□□□□□ -2.49
Rpap1Q80TE0 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.49□□□□□ -2.49
Rpap1Q80TE0 Gm23567-201ENSMUST00000178005 107 ntBASIC-0.5□□□□□ -2.49
Rpap1Q80TE0 Gm25235-201ENSMUST00000179933 107 ntBASIC-0.5□□□□□ -2.49
Rpap1Q80TE0 Gm27521-201ENSMUST00000184022 64 ntBASIC-0.5□□□□□ -2.49
Rpap1Q80TE0 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.5□□□□□ -2.49
Rpap1Q80TE0 AC166341.3-201ENSMUST00000221861 114 ntBASIC-0.5□□□□□ -2.49
Rpap1Q80TE0 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.5□□□□□ -2.49
Rpap1Q80TE0 Gm22571-201ENSMUST00000082984 70 ntBASIC-0.5□□□□□ -2.49
Rpap1Q80TE0 Gm23242-201ENSMUST00000083055 107 ntBASIC-0.5□□□□□ -2.49
Rpap1Q80TE0 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.51□□□□□ -2.49
Rpap1Q80TE0 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.51□□□□□ -2.49
Rpap1Q80TE0 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.51□□□□□ -2.49
Rpap1Q80TE0 Gm15030-201ENSMUST00000119804 484 ntBASIC-0.51□□□□□ -2.49
Rpap1Q80TE0 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.51□□□□□ -2.49
Rpap1Q80TE0 Gm44858-201ENSMUST00000207360 154 ntBASIC-0.51□□□□□ -2.49
Rpap1Q80TE0 Gm24929-201ENSMUST00000083403 139 ntBASIC-0.51□□□□□ -2.49
Rpap1Q80TE0 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.52□□□□□ -2.49
Rpap1Q80TE0 Gm22790-201ENSMUST00000157229 129 ntBASIC-0.52□□□□□ -2.49
Rpap1Q80TE0 Gm24006-201ENSMUST00000158462 132 ntBASIC-0.52□□□□□ -2.49
Rpap1Q80TE0 Gm26160-201ENSMUST00000158965 63 ntBASIC-0.52□□□□□ -2.49
Rpap1Q80TE0 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.52□□□□□ -2.49
Rpap1Q80TE0 Mir7227-201ENSMUST00000200408 59 ntBASIC-0.52□□□□□ -2.49
Rpap1Q80TE0 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.52□□□□□ -2.49
Rpap1Q80TE0 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.52□□□□□ -2.49
Rpap1Q80TE0 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.52□□□□□ -2.49
Rpap1Q80TE0 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-0.53□□□□□ -2.49
Rpap1Q80TE0 Gm11204-201ENSMUST00000122438 147 ntBASIC-0.53□□□□□ -2.49
Rpap1Q80TE0 Gm23219-201ENSMUST00000158123 87 ntBASIC-0.53□□□□□ -2.49
Rpap1Q80TE0 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.53□□□□□ -2.49
Rpap1Q80TE0 Mir6928-201ENSMUST00000185166 70 ntBASIC-0.53□□□□□ -2.49
Rpap1Q80TE0 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-0.53□□□□□ -2.49
Rpap1Q80TE0 Mir181b-2-201ENSMUST00000083644 89 ntBASIC-0.53□□□□□ -2.49
Rpap1Q80TE0 Mir183-201ENSMUST00000083685 70 ntBASIC-0.53□□□□□ -2.49
Rpap1Q80TE0 Gm24211-201ENSMUST00000158264 107 ntBASIC-0.54□□□□□ -2.5
Rpap1Q80TE0 Gm25267-201ENSMUST00000158522 63 ntBASIC-0.54□□□□□ -2.5
Rpap1Q80TE0 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.54□□□□□ -2.5
Rpap1Q80TE0 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC-0.54□□□□□ -2.5
Rpap1Q80TE0 Mir7657-201ENSMUST00000196051 57 ntBASIC-0.54□□□□□ -2.5
Rpap1Q80TE0 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.54□□□□□ -2.5
Rpap1Q80TE0 Gm12686-201ENSMUST00000120546 397 ntBASIC-0.55□□□□□ -2.5
Rpap1Q80TE0 Gm12924-201ENSMUST00000121747 318 ntBASIC-0.55□□□□□ -2.5
Rpap1Q80TE0 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.55□□□□□ -2.5
Rpap1Q80TE0 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.55□□□□□ -2.5
Rpap1Q80TE0 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.55□□□□□ -2.5
Rpap1Q80TE0 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 76,532 protein–RNA pairs in 259.1 ms