Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
Col27a1Q5QNQ9 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.04□□□□□ -2.42
Col27a1Q5QNQ9 AC192091.2-201ENSMUST00000217869 117 ntBASIC-0.04□□□□□ -2.42
Col27a1Q5QNQ9 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.04□□□□□ -2.42
Col27a1Q5QNQ9 Mir382-201ENSMUST00000083494 76 ntBASIC-0.04□□□□□ -2.42
Col27a1Q5QNQ9 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.05□□□□□ -2.42
Col27a1Q5QNQ9 Gm28020-201ENSMUST00000157739 67 ntBASIC-0.05□□□□□ -2.42
Col27a1Q5QNQ9 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.05□□□□□ -2.42
Col27a1Q5QNQ9 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.05□□□□□ -2.42
Col27a1Q5QNQ9 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.05□□□□□ -2.42
Col27a1Q5QNQ9 Mir3969-201ENSMUST00000197106 92 ntBASIC-0.05□□□□□ -2.42
Col27a1Q5QNQ9 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.05□□□□□ -2.42
Col27a1Q5QNQ9 Snord85-201ENSMUST00000083262 73 ntBASIC-0.05□□□□□ -2.42
Col27a1Q5QNQ9 Mir146-201ENSMUST00000083667 65 ntBASIC-0.05□□□□□ -2.42
Col27a1Q5QNQ9 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.06□□□□□ -2.42
Col27a1Q5QNQ9 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
Col27a1Q5QNQ9 Mir466p-201ENSMUST00000103925 89 ntBASIC-0.06□□□□□ -2.42
Col27a1Q5QNQ9 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.06□□□□□ -2.42
Col27a1Q5QNQ9 Gm26160-201ENSMUST00000158965 63 ntBASIC-0.06□□□□□ -2.42
Col27a1Q5QNQ9 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.06□□□□□ -2.42
Col27a1Q5QNQ9 Gm25235-201ENSMUST00000179933 107 ntBASIC-0.06□□□□□ -2.42
Col27a1Q5QNQ9 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.06□□□□□ -2.42
Col27a1Q5QNQ9 Mir218-1-201ENSMUST00000083669 110 ntBASIC-0.06□□□□□ -2.42
Col27a1Q5QNQ9 Gm25424-201ENSMUST00000157612 58 ntBASIC-0.06□□□□□ -2.42
Col27a1Q5QNQ9 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.06□□□□□ -2.42
Col27a1Q5QNQ9 Gm23763-201ENSMUST00000158345 60 ntBASIC-0.06□□□□□ -2.42
Col27a1Q5QNQ9 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.06□□□□□ -2.42
Col27a1Q5QNQ9 Mir672-201ENSMUST00000102331 100 ntBASIC-0.07□□□□□ -2.42
Col27a1Q5QNQ9 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.07□□□□□ -2.42
Col27a1Q5QNQ9 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC-0.07□□□□□ -2.42
Col27a1Q5QNQ9 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.07□□□□□ -2.42
Col27a1Q5QNQ9 Gm22491-201ENSMUST00000157190 102 ntBASIC-0.07□□□□□ -2.42
Col27a1Q5QNQ9 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.07□□□□□ -2.42
Col27a1Q5QNQ9 Gm14883-201ENSMUST00000120179 157 ntBASIC-0.08□□□□□ -2.42
Col27a1Q5QNQ9 Gm26279-201ENSMUST00000157095 102 ntBASIC-0.08□□□□□ -2.42
Col27a1Q5QNQ9 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.08□□□□□ -2.42
Col27a1Q5QNQ9 Gm25720-201ENSMUST00000157503 105 ntBASIC-0.08□□□□□ -2.42
Col27a1Q5QNQ9 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.08□□□□□ -2.42
Col27a1Q5QNQ9 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.08□□□□□ -2.42
Col27a1Q5QNQ9 Gm22145-201ENSMUST00000157396 148 ntBASIC-0.08□□□□□ -2.42
Col27a1Q5QNQ9 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.08□□□□□ -2.42
Col27a1Q5QNQ9 Gm44373-201ENSMUST00000196112 169 ntBASIC-0.08□□□□□ -2.42
Col27a1Q5QNQ9 AL603630.1-201ENSMUST00000214781 147 ntBASIC-0.08□□□□□ -2.42
Col27a1Q5QNQ9 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.08□□□□□ -2.42
Col27a1Q5QNQ9 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.08□□□□□ -2.42
Col27a1Q5QNQ9 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-0.08□□□□□ -2.42
Col27a1Q5QNQ9 Gm27446-201ENSMUST00000183963 89 ntBASIC-0.09□□□□□ -2.42
Col27a1Q5QNQ9 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.09□□□□□ -2.42
Col27a1Q5QNQ9 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.09□□□□□ -2.42
Col27a1Q5QNQ9 Gm26026-201ENSMUST00000122726 123 ntBASIC-0.1□□□□□ -2.43
Col27a1Q5QNQ9 Gm23581-201ENSMUST00000158531 63 ntBASIC-0.1□□□□□ -2.43
Col27a1Q5QNQ9 Gm26360-201ENSMUST00000158872 103 ntBASIC-0.1□□□□□ -2.43
Col27a1Q5QNQ9 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.1□□□□□ -2.43
Col27a1Q5QNQ9 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.1□□□□□ -2.43
Col27a1Q5QNQ9 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-0.1□□□□□ -2.43
Col27a1Q5QNQ9 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.1□□□□□ -2.43
Col27a1Q5QNQ9 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.1□□□□□ -2.43
Col27a1Q5QNQ9 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.1□□□□□ -2.43
Col27a1Q5QNQ9 Mir532-201ENSMUST00000093630 96 ntBASIC-0.1□□□□□ -2.43
Col27a1Q5QNQ9 Gm24121-201ENSMUST00000102029 106 ntBASIC-0.1□□□□□ -2.43
Col27a1Q5QNQ9 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.1□□□□□ -2.43
Col27a1Q5QNQ9 Gm22612-201ENSMUST00000158293 101 ntBASIC-0.1□□□□□ -2.43
Col27a1Q5QNQ9 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.1□□□□□ -2.43
Col27a1Q5QNQ9 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.1□□□□□ -2.43
Col27a1Q5QNQ9 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.1□□□□□ -2.43
Col27a1Q5QNQ9 Mir384-201ENSMUST00000083565 88 ntBASIC-0.1□□□□□ -2.43
Col27a1Q5QNQ9 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.11□□□□□ -2.43
Col27a1Q5QNQ9 Gm22079-201ENSMUST00000157592 106 ntBASIC-0.11□□□□□ -2.43
Col27a1Q5QNQ9 Gm23219-201ENSMUST00000158123 87 ntBASIC-0.11□□□□□ -2.43
Col27a1Q5QNQ9 Gm43505-201ENSMUST00000200579 139 ntBASIC-0.11□□□□□ -2.43
Col27a1Q5QNQ9 Gm45859-201ENSMUST00000212794 214 ntBASIC-0.11□□□□□ -2.43
Col27a1Q5QNQ9 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.11□□□□□ -2.43
Col27a1Q5QNQ9 AC122320.1-201ENSMUST00000227233 105 ntBASIC-0.11□□□□□ -2.43
Col27a1Q5QNQ9 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.11□□□□□ -2.43
Col27a1Q5QNQ9 Snora75-201ENSMUST00000082903 133 ntBASIC-0.11□□□□□ -2.43
Col27a1Q5QNQ9 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.12□□□□□ -2.43
Col27a1Q5QNQ9 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.12□□□□□ -2.43
Col27a1Q5QNQ9 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.12□□□□□ -2.43
Col27a1Q5QNQ9 AC154245.1-201ENSMUST00000224615 601 ntBASIC-0.12□□□□□ -2.43
Col27a1Q5QNQ9 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.12□□□□□ -2.43
Col27a1Q5QNQ9 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.12□□□□□ -2.43
Col27a1Q5QNQ9 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.12□□□□□ -2.43
Col27a1Q5QNQ9 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.13□□□□□ -2.43
Col27a1Q5QNQ9 Gm22850-201ENSMUST00000157714 82 ntBASIC-0.13□□□□□ -2.43
Col27a1Q5QNQ9 Gm24238-201ENSMUST00000157792 98 ntBASIC-0.13□□□□□ -2.43
Col27a1Q5QNQ9 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.13□□□□□ -2.43
Col27a1Q5QNQ9 Mir6336-201ENSMUST00000183581 130 ntBASIC-0.13□□□□□ -2.43
Col27a1Q5QNQ9 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.13□□□□□ -2.43
Col27a1Q5QNQ9 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.13□□□□□ -2.43
Col27a1Q5QNQ9 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.13□□□□□ -2.43
Col27a1Q5QNQ9 Gm27585-201ENSMUST00000183717 199 ntBASIC-0.13□□□□□ -2.43
Col27a1Q5QNQ9 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.13□□□□□ -2.43
Col27a1Q5QNQ9 Gm28925-201ENSMUST00000188586 168 ntBASIC-0.13□□□□□ -2.43
Col27a1Q5QNQ9 Ighv15-1-201ENSMUST00000194450 276 ntBASIC-0.13□□□□□ -2.43
Col27a1Q5QNQ9 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.13□□□□□ -2.43
Col27a1Q5QNQ9 Snord60-201ENSMUST00000082834 78 ntBASIC-0.13□□□□□ -2.43
Col27a1Q5QNQ9 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.13□□□□□ -2.43
Col27a1Q5QNQ9 Mir466f-3-201ENSMUST00000104788 94 ntBASIC-0.14□□□□□ -2.43
Col27a1Q5QNQ9 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.14□□□□□ -2.43
Col27a1Q5QNQ9 Gm22476-201ENSMUST00000158902 100 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 145.2 ms