Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm24799-201ENSMUST00000178431 79 ntBASIC-1.47□□□□□ -2.64
PrkdcP97313 CT009718.4-201ENSMUST00000221881 109 ntBASIC-1.47□□□□□ -2.64
PrkdcP97313 Gm26271-201ENSMUST00000158349 104 ntBASIC-1.47□□□□□ -2.64
PrkdcP97313 Gm25716-201ENSMUST00000158628 104 ntBASIC-1.47□□□□□ -2.64
PrkdcP97313 Gm26457-201ENSMUST00000082678 78 ntBASIC-1.47□□□□□ -2.64
PrkdcP97313 Gm24202-201ENSMUST00000082948 103 ntBASIC-1.47□□□□□ -2.64
PrkdcP97313 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.47□□□□□ -2.64
PrkdcP97313 Trav5-2-201ENSMUST00000199855 280 ntBASIC-1.47□□□□□ -2.65
PrkdcP97313 Gm26456-201ENSMUST00000082831 111 ntBASIC-1.47□□□□□ -2.65
PrkdcP97313 AC121844.1-201ENSMUST00000218706 137 ntBASIC-1.48□□□□□ -2.65
PrkdcP97313 Gm23587-201ENSMUST00000157658 84 ntBASIC-1.48□□□□□ -2.65
PrkdcP97313 AC168880.1-201ENSMUST00000225113 707 ntBASIC-1.48□□□□□ -2.65
PrkdcP97313 Gm15077-201ENSMUST00000122344 362 ntBASIC-1.48□□□□□ -2.65
PrkdcP97313 AC164297.3-201ENSMUST00000224238 94 ntBASIC-1.48□□□□□ -2.65
PrkdcP97313 Gm17919-201ENSMUST00000173344 312 ntBASIC-1.49□□□□□ -2.65
PrkdcP97313 Mir379-201ENSMUST00000083564 66 ntBASIC-1.49□□□□□ -2.65
PrkdcP97313 Gm28917-201ENSMUST00000187294 237 ntBASIC-1.49□□□□□ -2.65
PrkdcP97313 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.49□□□□□ -2.65
PrkdcP97313 Gm25329-201ENSMUST00000158041 126 ntBASIC-1.49□□□□□ -2.65
PrkdcP97313 Gm24618-201ENSMUST00000177718 94 ntBASIC-1.49□□□□□ -2.65
PrkdcP97313 Gm23953-201ENSMUST00000178214 94 ntBASIC-1.49□□□□□ -2.65
PrkdcP97313 Gm26332-201ENSMUST00000179813 94 ntBASIC-1.49□□□□□ -2.65
PrkdcP97313 Gm22863-201ENSMUST00000180265 94 ntBASIC-1.49□□□□□ -2.65
PrkdcP97313 Gm24492-201ENSMUST00000083798 107 ntBASIC-1.49□□□□□ -2.65
PrkdcP97313 Gm26177-201ENSMUST00000178683 107 ntBASIC-1.5□□□□□ -2.65
PrkdcP97313 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC-1.5□□□□□ -2.65
PrkdcP97313 Gm24640-201ENSMUST00000116949 126 ntBASIC-1.5□□□□□ -2.65
PrkdcP97313 Gm22626-201ENSMUST00000116990 126 ntBASIC-1.5□□□□□ -2.65
PrkdcP97313 Gm11204-201ENSMUST00000122438 147 ntBASIC-1.5□□□□□ -2.65
PrkdcP97313 Gm24635-201ENSMUST00000122712 128 ntBASIC-1.5□□□□□ -2.65
PrkdcP97313 Gm23665-201ENSMUST00000158054 62 ntBASIC-1.5□□□□□ -2.65
PrkdcP97313 Gm42805-201ENSMUST00000196158 276 ntBASIC-1.5□□□□□ -2.65
PrkdcP97313 Gm26022-201ENSMUST00000158663 108 ntBASIC-1.51□□□□□ -2.65
PrkdcP97313 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC-1.51□□□□□ -2.65
PrkdcP97313 Gm24461-201ENSMUST00000082735 103 ntBASIC-1.51□□□□□ -2.65
PrkdcP97313 Gm26500-201ENSMUST00000101867 106 ntBASIC-1.51□□□□□ -2.65
PrkdcP97313 Gm24223-201ENSMUST00000158827 90 ntBASIC-1.51□□□□□ -2.65
PrkdcP97313 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-1.51□□□□□ -2.65
PrkdcP97313 Gm24818-201ENSMUST00000175093 161 ntBASIC-1.51□□□□□ -2.65
PrkdcP97313 Gm22433-201ENSMUST00000158550 142 ntBASIC-1.51□□□□□ -2.65
PrkdcP97313 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC-1.51□□□□□ -2.65
PrkdcP97313 Gm22850-201ENSMUST00000157714 82 ntBASIC-1.52□□□□□ -2.65
PrkdcP97313 Gm17054-201ENSMUST00000169811 259 ntBASIC-1.52□□□□□ -2.65
PrkdcP97313 AC164297.5-201ENSMUST00000224365 198 ntBASIC-1.52□□□□□ -2.65
PrkdcP97313 AC167192.2-201ENSMUST00000224794 198 ntBASIC-1.52□□□□□ -2.65
PrkdcP97313 Mir7657-201ENSMUST00000196051 57 ntBASIC-1.52□□□□□ -2.65
PrkdcP97313 Gm43749-201ENSMUST00000199345 352 ntBASIC-1.52□□□□□ -2.65
PrkdcP97313 AC192333.1-201ENSMUST00000224573 376 ntBASIC-1.52□□□□□ -2.65
PrkdcP97313 Gm24238-201ENSMUST00000157792 98 ntBASIC-1.52□□□□□ -2.65
PrkdcP97313 Gm22259-201ENSMUST00000178926 107 ntBASIC-1.52□□□□□ -2.65
PrkdcP97313 Gm24042-201ENSMUST00000083114 103 ntBASIC-1.52□□□□□ -2.65
PrkdcP97313 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.53□□□□□ -2.65
PrkdcP97313 Gm25056-201ENSMUST00000157372 62 ntBASIC-1.53□□□□□ -2.65
PrkdcP97313 Gm23655-201ENSMUST00000122627 105 ntBASIC-1.53□□□□□ -2.65
PrkdcP97313 Gm25664-201ENSMUST00000157697 107 ntBASIC-1.53□□□□□ -2.65
PrkdcP97313 Gm25054-201ENSMUST00000157370 97 ntBASIC-1.54□□□□□ -2.66
PrkdcP97313 n-R5s94-201ENSMUST00000082573 119 ntBASIC-1.54□□□□□ -2.66
PrkdcP97313 Gm22051-201ENSMUST00000117002 127 ntBASIC-1.54□□□□□ -2.66
PrkdcP97313 Mir465d-201ENSMUST00000196314 58 ntBASIC-1.54□□□□□ -2.66
PrkdcP97313 Gm45543-201ENSMUST00000209327 88 ntBASIC-1.54□□□□□ -2.66
PrkdcP97313 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-1.54□□□□□ -2.66
PrkdcP97313 Gm26084-201ENSMUST00000157903 104 ntBASIC-1.54□□□□□ -2.66
PrkdcP97313 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-1.54□□□□□ -2.66
PrkdcP97313 AC098718.2-201ENSMUST00000226822 285 ntBASIC-1.54□□□□□ -2.66
PrkdcP97313 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-1.54□□□□□ -2.66
PrkdcP97313 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-1.55□□□□□ -2.66
PrkdcP97313 Gm25024-201ENSMUST00000179667 104 ntBASIC-1.55□□□□□ -2.66
PrkdcP97313 Mir20b-201ENSMUST00000102087 80 ntBASIC-1.55□□□□□ -2.66
PrkdcP97313 Gm22294-201ENSMUST00000083308 104 ntBASIC-1.56□□□□□ -2.66
PrkdcP97313 Mir485-201ENSMUST00000093620 73 ntBASIC-1.56□□□□□ -2.66
PrkdcP97313 Gm25317-201ENSMUST00000116824 129 ntBASIC-1.56□□□□□ -2.66
PrkdcP97313 Gm22791-201ENSMUST00000157232 145 ntBASIC-1.56□□□□□ -2.66
PrkdcP97313 Mir6411-201ENSMUST00000183556 108 ntBASIC-1.56□□□□□ -2.66
PrkdcP97313 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC-1.56□□□□□ -2.66
PrkdcP97313 AC166358.7-201ENSMUST00000221132 108 ntBASIC-1.56□□□□□ -2.66
PrkdcP97313 AC125543.5-201ENSMUST00000222799 108 ntBASIC-1.56□□□□□ -2.66
PrkdcP97313 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC-1.57□□□□□ -2.66
PrkdcP97313 Gm27995-201ENSMUST00000184402 100 ntBASIC-1.57□□□□□ -2.66
PrkdcP97313 Gm27624-201ENSMUST00000185047 177 ntBASIC-1.57□□□□□ -2.66
PrkdcP97313 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC-1.57□□□□□ -2.66
PrkdcP97313 Gm45403-201ENSMUST00000209453 276 ntBASIC-1.57□□□□□ -2.66
PrkdcP97313 Gm23900-201ENSMUST00000157569 108 ntBASIC-1.58□□□□□ -2.66
PrkdcP97313 Gm26398-201ENSMUST00000179015 127 ntBASIC-1.58□□□□□ -2.66
PrkdcP97313 Gm26122-201ENSMUST00000083362 82 ntBASIC-1.58□□□□□ -2.66
PrkdcP97313 Gm43977-201ENSMUST00000203970 189 ntBASIC-1.58□□□□□ -2.66
PrkdcP97313 Mir450-2-201ENSMUST00000102444 69 ntBASIC-1.58□□□□□ -2.66
PrkdcP97313 Mir669h-201ENSMUST00000116944 125 ntBASIC-1.58□□□□□ -2.66
PrkdcP97313 Gm24877-201ENSMUST00000158779 116 ntBASIC-1.58□□□□□ -2.66
PrkdcP97313 Gm23451-201ENSMUST00000083328 122 ntBASIC-1.58□□□□□ -2.66
PrkdcP97313 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-1.59□□□□□ -2.66
PrkdcP97313 Mir465b-1-201ENSMUST00000103940 79 ntBASIC-1.59□□□□□ -2.66
PrkdcP97313 Mir465b-2-201ENSMUST00000104662 79 ntBASIC-1.59□□□□□ -2.66
PrkdcP97313 Gm25769-201ENSMUST00000158569 127 ntBASIC-1.59□□□□□ -2.66
PrkdcP97313 Gm12748-201ENSMUST00000120763 504 ntBASIC-1.59□□□□□ -2.66
PrkdcP97313 Gm5002-201ENSMUST00000207145 223 ntBASIC-1.59□□□□□ -2.66
PrkdcP97313 Gm16362-201ENSMUST00000135189 214 ntBASIC-1.59□□□□□ -2.66
PrkdcP97313 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC-1.59□□□□□ -2.66
PrkdcP97313 Gm25285-201ENSMUST00000178951 90 ntBASIC-1.59□□□□□ -2.66
PrkdcP97313 Mir466c-2-201ENSMUST00000180211 90 ntBASIC-1.59□□□□□ -2.66
PrkdcP97313 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC-1.59□□□□□ -2.66
Retrieved 100 of 76,532 protein–RNA pairs in 163.5 ms