Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm37778-201ENSMUST00000191732 190 ntBASIC2.4□□□□□ -2.03
Col18a1P39061 Gm25199-201ENSMUST00000083095 104 ntBASIC2.4□□□□□ -2.03
Col18a1P39061 Gm25627-201ENSMUST00000084003 153 ntBASIC2.4□□□□□ -2.03
Col18a1P39061 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Col18a1P39061 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Col18a1P39061 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Col18a1P39061 Gm16550-201ENSMUST00000162550 126 ntBASIC2.39□□□□□ -2.03
Col18a1P39061 AC139186.1-201ENSMUST00000197610 94 ntBASIC2.39□□□□□ -2.03
Col18a1P39061 Gm43865-201ENSMUST00000204721 127 ntBASIC2.39□□□□□ -2.03
Col18a1P39061 Gm26207-201ENSMUST00000082909 104 ntBASIC2.39□□□□□ -2.03
Col18a1P39061 Gm24162-201ENSMUST00000093665 102 ntBASIC2.39□□□□□ -2.03
Col18a1P39061 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Col18a1P39061 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Col18a1P39061 Gm23886-201ENSMUST00000122684 313 ntBASIC2.38□□□□□ -2.03
Col18a1P39061 Gm24345-201ENSMUST00000158706 124 ntBASIC2.38□□□□□ -2.03
Col18a1P39061 Gm24226-201ENSMUST00000158826 97 ntBASIC2.38□□□□□ -2.03
Col18a1P39061 Gm22858-201ENSMUST00000174972 76 ntBASIC2.38□□□□□ -2.03
Col18a1P39061 Gm44807-201ENSMUST00000206115 154 ntBASIC2.38□□□□□ -2.03
Col18a1P39061 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.38□□□□□ -2.03
Col18a1P39061 Gm24412-201ENSMUST00000083426 109 ntBASIC2.38□□□□□ -2.03
Col18a1P39061 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Col18a1P39061 Gm9009-201ENSMUST00000117321 326 ntBASIC2.38□□□□□ -2.03
Col18a1P39061 Gm24384-201ENSMUST00000122693 75 ntBASIC2.38□□□□□ -2.03
Col18a1P39061 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.38□□□□□ -2.03
Col18a1P39061 Mir200b-201ENSMUST00000083615 70 ntBASIC2.38□□□□□ -2.03
Col18a1P39061 Mir30c-2-201ENSMUST00000083633 84 ntBASIC2.38□□□□□ -2.03
Col18a1P39061 Mir880-201ENSMUST00000104809 78 ntBASIC2.37□□□□□ -2.03
Col18a1P39061 Rnu7-201ENSMUST00000158458 62 ntBASIC2.37□□□□□ -2.03
Col18a1P39061 Gm23477-201ENSMUST00000158882 128 ntBASIC2.37□□□□□ -2.03
Col18a1P39061 Gm27544-201ENSMUST00000185069 155 ntBASIC2.37□□□□□ -2.03
Col18a1P39061 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Col18a1P39061 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.37□□□□□ -2.03
Col18a1P39061 Gm23723-201ENSMUST00000082996 132 ntBASIC2.37□□□□□ -2.03
Col18a1P39061 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Col18a1P39061 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.37□□□□□ -2.03
Col18a1P39061 Gm43885-201ENSMUST00000204928 2542 ntBASIC2.36□□□□□ -2.03
Col18a1P39061 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
Col18a1P39061 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.36□□□□□ -2.03
Col18a1P39061 Gm15115-201ENSMUST00000121145 264 ntBASIC2.36□□□□□ -2.03
Col18a1P39061 Gm24573-201ENSMUST00000175499 112 ntBASIC2.36□□□□□ -2.03
Col18a1P39061 AC158537.2-201ENSMUST00000223575 150 ntBASIC2.36□□□□□ -2.03
Col18a1P39061 Gm25964-201ENSMUST00000157171 97 ntBASIC2.36□□□□□ -2.03
Col18a1P39061 Gm22279-201ENSMUST00000157200 93 ntBASIC2.36□□□□□ -2.03
Col18a1P39061 Gm37428-201ENSMUST00000193886 137 ntBASIC2.36□□□□□ -2.03
Col18a1P39061 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC2.36□□□□□ -2.03
Col18a1P39061 Gm43960-201ENSMUST00000204249 5020 ntBASIC2.35□□□□□ -2.03
Col18a1P39061 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col18a1P39061 Gm5581-201ENSMUST00000072940 2550 ntBASIC2.35□□□□□ -2.03
Col18a1P39061 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.35□□□□□ -2.03
Col18a1P39061 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.35□□□□□ -2.03
Col18a1P39061 Gm23672-201ENSMUST00000157471 107 ntBASIC2.35□□□□□ -2.03
Col18a1P39061 Gm26090-201ENSMUST00000157897 128 ntBASIC2.35□□□□□ -2.03
Col18a1P39061 Mir6985-201ENSMUST00000184641 61 ntBASIC2.35□□□□□ -2.03
Col18a1P39061 AC160550.1-201ENSMUST00000228659 181 ntBASIC2.35□□□□□ -2.03
Col18a1P39061 Gm22507-201ENSMUST00000082773 160 ntBASIC2.35□□□□□ -2.03
Col18a1P39061 Gm23247-201ENSMUST00000083373 107 ntBASIC2.35□□□□□ -2.03
Col18a1P39061 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col18a1P39061 Gm23381-201ENSMUST00000157676 94 ntBASIC2.34□□□□□ -2.03
Col18a1P39061 Gm23630-201ENSMUST00000175292 104 ntBASIC2.34□□□□□ -2.03
Col18a1P39061 Mir3064-201ENSMUST00000175532 67 ntBASIC2.34□□□□□ -2.03
Col18a1P39061 Gm26398-201ENSMUST00000179015 127 ntBASIC2.34□□□□□ -2.03
Col18a1P39061 Gm25618-201ENSMUST00000179484 107 ntBASIC2.34□□□□□ -2.03
Col18a1P39061 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.34□□□□□ -2.03
Col18a1P39061 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Col18a1P39061 Gm42795-201ENSMUST00000198847 76 ntBASIC2.34□□□□□ -2.03
Col18a1P39061 Gm23246-201ENSMUST00000083371 67 ntBASIC2.34□□□□□ -2.03
Col18a1P39061 Gm26369-201ENSMUST00000157825 100 ntBASIC2.33□□□□□ -2.04
Col18a1P39061 Gm42935-201ENSMUST00000202004 151 ntBASIC2.33□□□□□ -2.04
Col18a1P39061 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.33□□□□□ -2.04
Col18a1P39061 Mir764-201ENSMUST00000103259 108 ntBASIC2.33□□□□□ -2.04
Col18a1P39061 Mir293-201ENSMUST00000104841 80 ntBASIC2.33□□□□□ -2.04
Col18a1P39061 Gm22999-201ENSMUST00000157082 88 ntBASIC2.33□□□□□ -2.04
Col18a1P39061 Gm26499-201ENSMUST00000178544 79 ntBASIC2.33□□□□□ -2.04
Col18a1P39061 Gm26096-201ENSMUST00000179084 79 ntBASIC2.33□□□□□ -2.04
Col18a1P39061 Mir7059-201ENSMUST00000184825 59 ntBASIC2.33□□□□□ -2.04
Col18a1P39061 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Col18a1P39061 Gm35736-201ENSMUST00000203681 313 ntBASIC2.33□□□□□ -2.04
Col18a1P39061 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.33□□□□□ -2.04
Col18a1P39061 Gm45544-201ENSMUST00000211130 88 ntBASIC2.32□□□□□ -2.04
Col18a1P39061 Gm26123-201ENSMUST00000083363 135 ntBASIC2.32□□□□□ -2.04
Col18a1P39061 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Col18a1P39061 Gm25728-201ENSMUST00000104525 159 ntBASIC2.31□□□□□ -2.04
Col18a1P39061 Gm25300-201ENSMUST00000175284 84 ntBASIC2.31□□□□□ -2.04
Col18a1P39061 Mir7232-201ENSMUST00000197929 74 ntBASIC2.31□□□□□ -2.04
Col18a1P39061 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.31□□□□□ -2.04
Col18a1P39061 Gm23336-201ENSMUST00000117023 123 ntBASIC2.31□□□□□ -2.04
Col18a1P39061 Mir6390-201ENSMUST00000184405 129 ntBASIC2.31□□□□□ -2.04
Col18a1P39061 Mir6405-201ENSMUST00000184584 124 ntBASIC2.31□□□□□ -2.04
Col18a1P39061 Gm43038-201ENSMUST00000202359 88 ntBASIC2.31□□□□□ -2.04
Col18a1P39061 AC122769.2-201ENSMUST00000227248 302 ntBASIC2.31□□□□□ -2.04
Col18a1P39061 Gm24624-201ENSMUST00000082617 164 ntBASIC2.31□□□□□ -2.04
Col18a1P39061 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.3□□□□□ -2.04
Col18a1P39061 Gm22521-201ENSMUST00000158272 134 ntBASIC2.3□□□□□ -2.04
Col18a1P39061 Gm25198-201ENSMUST00000178574 110 ntBASIC2.3□□□□□ -2.04
Col18a1P39061 Gm23344-201ENSMUST00000083818 68 ntBASIC2.3□□□□□ -2.04
Col18a1P39061 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Col18a1P39061 Gm12469-201ENSMUST00000117623 207 ntBASIC2.29□□□□□ -2.04
Col18a1P39061 Gm22083-201ENSMUST00000157586 102 ntBASIC2.29□□□□□ -2.04
Col18a1P39061 Gm23856-201ENSMUST00000158380 99 ntBASIC2.29□□□□□ -2.04
Col18a1P39061 Gm23181-201ENSMUST00000158685 110 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 186.2 ms