Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Gm25635-201ENSMUST00000082675 131 ntBASIC1.88□□□□□ -2.11
Hoxd4P10628 Gm22752-201ENSMUST00000102083 109 ntBASIC1.87□□□□□ -2.11
Hoxd4P10628 Gm23548-201ENSMUST00000158963 106 ntBASIC1.87□□□□□ -2.11
Hoxd4P10628 Gm27399-201ENSMUST00000184250 78 ntBASIC1.87□□□□□ -2.11
Hoxd4P10628 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.87□□□□□ -2.11
Hoxd4P10628 Gm44462-201ENSMUST00000199696 129 ntBASIC1.87□□□□□ -2.11
Hoxd4P10628 Gm23344-201ENSMUST00000083818 68 ntBASIC1.87□□□□□ -2.11
Hoxd4P10628 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Hoxd4P10628 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Hoxd4P10628 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Hoxd4P10628 Gm24049-201ENSMUST00000102409 100 ntBASIC1.86□□□□□ -2.11
Hoxd4P10628 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Hoxd4P10628 Gm22815-201ENSMUST00000157451 62 ntBASIC1.86□□□□□ -2.11
Hoxd4P10628 Gm24783-201ENSMUST00000157639 100 ntBASIC1.86□□□□□ -2.11
Hoxd4P10628 Gm22539-201ENSMUST00000158167 117 ntBASIC1.86□□□□□ -2.11
Hoxd4P10628 Gm24880-201ENSMUST00000158776 85 ntBASIC1.86□□□□□ -2.11
Hoxd4P10628 Gm20391-201ENSMUST00000174722 106 ntBASIC1.86□□□□□ -2.11
Hoxd4P10628 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.86□□□□□ -2.11
Hoxd4P10628 Gm24918-201ENSMUST00000083022 130 ntBASIC1.86□□□□□ -2.11
Hoxd4P10628 Mir5117-201ENSMUST00000083226 84 ntBASIC1.86□□□□□ -2.11
Hoxd4P10628 Gm24412-201ENSMUST00000083426 109 ntBASIC1.86□□□□□ -2.11
Hoxd4P10628 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.86□□□□□ -2.11
Hoxd4P10628 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.85□□□□□ -2.11
Hoxd4P10628 Gm25322-201ENSMUST00000122556 104 ntBASIC1.85□□□□□ -2.11
Hoxd4P10628 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.85□□□□□ -2.11
Hoxd4P10628 Gm24384-201ENSMUST00000122693 75 ntBASIC1.85□□□□□ -2.11
Hoxd4P10628 Gm15654-201ENSMUST00000152660 300 ntBASIC1.85□□□□□ -2.11
Hoxd4P10628 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.84□□□□□ -2.11
Hoxd4P10628 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
Hoxd4P10628 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.84□□□□□ -2.11
Hoxd4P10628 Mir1197-201ENSMUST00000117037 120 ntBASIC1.84□□□□□ -2.11
Hoxd4P10628 Gm24199-201ENSMUST00000157808 136 ntBASIC1.84□□□□□ -2.11
Hoxd4P10628 Gm22732-201ENSMUST00000158093 121 ntBASIC1.84□□□□□ -2.11
Hoxd4P10628 Gm25618-201ENSMUST00000179484 107 ntBASIC1.84□□□□□ -2.11
Hoxd4P10628 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Hoxd4P10628 Gm37557-201ENSMUST00000191640 139 ntBASIC1.84□□□□□ -2.11
Hoxd4P10628 Gm44477-201ENSMUST00000199661 110 ntBASIC1.84□□□□□ -2.11
Hoxd4P10628 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Hoxd4P10628 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.84□□□□□ -2.12
Hoxd4P10628 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Hoxd4P10628 Gm12941-201ENSMUST00000117934 220 ntBASIC1.83□□□□□ -2.12
Hoxd4P10628 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.83□□□□□ -2.12
Hoxd4P10628 Gm24851-201ENSMUST00000158028 103 ntBASIC1.83□□□□□ -2.12
Hoxd4P10628 Gm23996-201ENSMUST00000158062 131 ntBASIC1.83□□□□□ -2.12
Hoxd4P10628 Gm26213-201ENSMUST00000158582 110 ntBASIC1.83□□□□□ -2.12
Hoxd4P10628 Gm16550-201ENSMUST00000162550 126 ntBASIC1.83□□□□□ -2.12
Hoxd4P10628 Gm25241-201ENSMUST00000174909 84 ntBASIC1.83□□□□□ -2.12
Hoxd4P10628 Gm26217-201ENSMUST00000175212 84 ntBASIC1.83□□□□□ -2.12
Hoxd4P10628 Gm25750-201ENSMUST00000175483 112 ntBASIC1.83□□□□□ -2.12
Hoxd4P10628 Gm25820-202ENSMUST00000197479 128 ntBASIC1.83□□□□□ -2.12
Hoxd4P10628 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.83□□□□□ -2.12
Hoxd4P10628 Gm23570-201ENSMUST00000083029 104 ntBASIC1.83□□□□□ -2.12
Hoxd4P10628 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.83□□□□□ -2.12
Hoxd4P10628 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hoxd4P10628 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Hoxd4P10628 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Hoxd4P10628 Gm25094-201ENSMUST00000103992 131 ntBASIC1.82□□□□□ -2.12
Hoxd4P10628 Gm26290-201ENSMUST00000158891 145 ntBASIC1.82□□□□□ -2.12
Hoxd4P10628 Gm24333-201ENSMUST00000175101 84 ntBASIC1.82□□□□□ -2.12
Hoxd4P10628 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.82□□□□□ -2.12
Hoxd4P10628 Gm23375-201ENSMUST00000175407 83 ntBASIC1.82□□□□□ -2.12
Hoxd4P10628 Mir6369-201ENSMUST00000183772 106 ntBASIC1.82□□□□□ -2.12
Hoxd4P10628 Gm27419-201ENSMUST00000184576 109 ntBASIC1.82□□□□□ -2.12
Hoxd4P10628 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.82□□□□□ -2.12
Hoxd4P10628 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Hoxd4P10628 Gm14884-201ENSMUST00000120456 196 ntBASIC1.81□□□□□ -2.12
Hoxd4P10628 Gm25113-201ENSMUST00000157185 143 ntBASIC1.81□□□□□ -2.12
Hoxd4P10628 Gm24868-201ENSMUST00000157265 136 ntBASIC1.81□□□□□ -2.12
Hoxd4P10628 Gm22099-201ENSMUST00000157925 123 ntBASIC1.81□□□□□ -2.12
Hoxd4P10628 Gm24077-201ENSMUST00000158183 136 ntBASIC1.81□□□□□ -2.12
Hoxd4P10628 Mir7016-201ENSMUST00000184308 72 ntBASIC1.81□□□□□ -2.12
Hoxd4P10628 Mir6388-201ENSMUST00000184417 75 ntBASIC1.81□□□□□ -2.12
Hoxd4P10628 Mir429-201ENSMUST00000083493 83 ntBASIC1.81□□□□□ -2.12
Hoxd4P10628 Mir3096-201ENSMUST00000116685 71 ntBASIC1.8□□□□□ -2.12
Hoxd4P10628 Gm23656-201ENSMUST00000122626 112 ntBASIC1.8□□□□□ -2.12
Hoxd4P10628 Gm16328-201ENSMUST00000126985 196 ntBASIC1.8□□□□□ -2.12
Hoxd4P10628 Gm26485-201ENSMUST00000158019 64 ntBASIC1.8□□□□□ -2.12
Hoxd4P10628 Gm25044-201ENSMUST00000158603 104 ntBASIC1.8□□□□□ -2.12
Hoxd4P10628 Gm23342-201ENSMUST00000158958 115 ntBASIC1.8□□□□□ -2.12
Hoxd4P10628 Gm22264-201ENSMUST00000178200 107 ntBASIC1.8□□□□□ -2.12
Hoxd4P10628 Mir6950-201ENSMUST00000184438 73 ntBASIC1.8□□□□□ -2.12
Hoxd4P10628 Gm27544-201ENSMUST00000185069 155 ntBASIC1.8□□□□□ -2.12
Hoxd4P10628 Mir30f-201ENSMUST00000196073 92 ntBASIC1.8□□□□□ -2.12
Hoxd4P10628 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.8□□□□□ -2.12
Hoxd4P10628 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
Hoxd4P10628 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.79□□□□□ -2.12
Hoxd4P10628 Gm23951-201ENSMUST00000104029 132 ntBASIC1.79□□□□□ -2.12
Hoxd4P10628 Mir344e-201ENSMUST00000104677 66 ntBASIC1.79□□□□□ -2.12
Hoxd4P10628 Gm24399-201ENSMUST00000157869 74 ntBASIC1.79□□□□□ -2.12
Hoxd4P10628 Gm25011-201ENSMUST00000158398 126 ntBASIC1.79□□□□□ -2.12
Hoxd4P10628 Gm25160-201ENSMUST00000158914 102 ntBASIC1.79□□□□□ -2.12
Hoxd4P10628 Gm24575-201ENSMUST00000175502 77 ntBASIC1.79□□□□□ -2.12
Hoxd4P10628 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Hoxd4P10628 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.78□□□□□ -2.12
Hoxd4P10628 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Hoxd4P10628 Gm11966-201ENSMUST00000119907 87 ntBASIC1.78□□□□□ -2.12
Hoxd4P10628 Gm25996-201ENSMUST00000175393 117 ntBASIC1.78□□□□□ -2.12
Hoxd4P10628 Gm5900-201ENSMUST00000179862 375 ntBASIC1.78□□□□□ -2.12
Hoxd4P10628 Mir7226-201ENSMUST00000184953 60 ntBASIC1.78□□□□□ -2.12
Hoxd4P10628 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.78□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 141.6 ms