Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm44602-201ENSMUST00000205948 132 ntBASIC2.07□□□□□ -2.08
Hoxd3P09027 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.07□□□□□ -2.08
Hoxd3P09027 AC122769.2-201ENSMUST00000227248 302 ntBASIC2.07□□□□□ -2.08
Hoxd3P09027 Gm22154-201ENSMUST00000083844 131 ntBASIC2.07□□□□□ -2.08
Hoxd3P09027 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Hoxd3P09027 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Hoxd3P09027 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Hoxd3P09027 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Hoxd3P09027 Gm25901-201ENSMUST00000158494 130 ntBASIC2.06□□□□□ -2.08
Hoxd3P09027 Gm24681-201ENSMUST00000158760 107 ntBASIC2.06□□□□□ -2.08
Hoxd3P09027 Mir6390-201ENSMUST00000184405 129 ntBASIC2.06□□□□□ -2.08
Hoxd3P09027 Gm27979-201ENSMUST00000185126 56 ntBASIC2.06□□□□□ -2.08
Hoxd3P09027 Gm37807-201ENSMUST00000194310 190 ntBASIC2.06□□□□□ -2.08
Hoxd3P09027 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC2.06□□□□□ -2.08
Hoxd3P09027 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.06□□□□□ -2.08
Hoxd3P09027 Gm6293-201ENSMUST00000050339 195 ntBASIC2.06□□□□□ -2.08
Hoxd3P09027 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.06□□□□□ -2.08
Hoxd3P09027 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.06□□□□□ -2.08
Hoxd3P09027 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.05□□□□□ -2.08
Hoxd3P09027 Mir682-201ENSMUST00000102281 96 ntBASIC2.05□□□□□ -2.08
Hoxd3P09027 Mir466k-201ENSMUST00000116774 122 ntBASIC2.05□□□□□ -2.08
Hoxd3P09027 Gm24922-201ENSMUST00000158511 102 ntBASIC2.05□□□□□ -2.08
Hoxd3P09027 Mir3057-201ENSMUST00000175040 91 ntBASIC2.05□□□□□ -2.08
Hoxd3P09027 Mir3086-201ENSMUST00000175072 87 ntBASIC2.05□□□□□ -2.08
Hoxd3P09027 Gm26499-201ENSMUST00000178544 79 ntBASIC2.05□□□□□ -2.08
Hoxd3P09027 Gm23306-201ENSMUST00000179058 105 ntBASIC2.05□□□□□ -2.08
Hoxd3P09027 Gm26096-201ENSMUST00000179084 79 ntBASIC2.05□□□□□ -2.08
Hoxd3P09027 Mir8103-201ENSMUST00000183945 107 ntBASIC2.05□□□□□ -2.08
Hoxd3P09027 AC157602.1-201ENSMUST00000197446 105 ntBASIC2.05□□□□□ -2.08
Hoxd3P09027 Gm43038-201ENSMUST00000202359 88 ntBASIC2.05□□□□□ -2.08
Hoxd3P09027 AC158537.2-201ENSMUST00000223575 150 ntBASIC2.05□□□□□ -2.08
Hoxd3P09027 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Hoxd3P09027 Gm24588-201ENSMUST00000116696 83 ntBASIC2.04□□□□□ -2.08
Hoxd3P09027 Gm25964-201ENSMUST00000157171 97 ntBASIC2.04□□□□□ -2.08
Hoxd3P09027 Snord53-201ENSMUST00000175146 78 ntBASIC2.04□□□□□ -2.08
Hoxd3P09027 Mir3076-201ENSMUST00000175415 60 ntBASIC2.04□□□□□ -2.08
Hoxd3P09027 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Hoxd3P09027 Gm22622-201ENSMUST00000082870 129 ntBASIC2.04□□□□□ -2.08
Hoxd3P09027 Mir29a-201ENSMUST00000083676 88 ntBASIC2.04□□□□□ -2.08
Hoxd3P09027 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Hoxd3P09027 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Hoxd3P09027 Gm23409-201ENSMUST00000158516 237 ntBASIC2.03□□□□□ -2.08
Hoxd3P09027 Gm7258-201ENSMUST00000179317 300 ntBASIC2.03□□□□□ -2.08
Hoxd3P09027 Gm28435-201ENSMUST00000185496 108 ntBASIC2.03□□□□□ -2.08
Hoxd3P09027 Gm29047-201ENSMUST00000189816 108 ntBASIC2.03□□□□□ -2.08
Hoxd3P09027 Mir300-201ENSMUST00000083485 79 ntBASIC2.03□□□□□ -2.08
Hoxd3P09027 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Hoxd3P09027 Gm24378-201ENSMUST00000122699 106 ntBASIC2.02□□□□□ -2.09
Hoxd3P09027 Mir1899-201ENSMUST00000122798 96 ntBASIC2.02□□□□□ -2.09
Hoxd3P09027 Gm24082-201ENSMUST00000175175 83 ntBASIC2.02□□□□□ -2.09
Hoxd3P09027 Snord87-201ENSMUST00000175437 87 ntBASIC2.02□□□□□ -2.09
Hoxd3P09027 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.02□□□□□ -2.09
Hoxd3P09027 Gm26712-201ENSMUST00000180813 217 ntBASIC2.02□□□□□ -2.09
Hoxd3P09027 Snord43-201ENSMUST00000199549 108 ntBASIC2.02□□□□□ -2.09
Hoxd3P09027 Mir151-201ENSMUST00000083678 68 ntBASIC2.02□□□□□ -2.09
Hoxd3P09027 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Hoxd3P09027 Gm24396-201ENSMUST00000116905 93 ntBASIC2.01□□□□□ -2.09
Hoxd3P09027 Gm22651-201ENSMUST00000157872 94 ntBASIC2.01□□□□□ -2.09
Hoxd3P09027 Mir5104-201ENSMUST00000175319 94 ntBASIC2.01□□□□□ -2.09
Hoxd3P09027 Gm25994-201ENSMUST00000175392 101 ntBASIC2.01□□□□□ -2.09
Hoxd3P09027 Mir7241-201ENSMUST00000184532 64 ntBASIC2.01□□□□□ -2.09
Hoxd3P09027 Gm28767-201ENSMUST00000188601 114 ntBASIC2.01□□□□□ -2.09
Hoxd3P09027 Snord104-201ENSMUST00000083192 70 ntBASIC2.01□□□□□ -2.09
Hoxd3P09027 Gm38706-201ENSMUST00000182397 2617 ntBASIC2□□□□□ -2.09
Hoxd3P09027 Gm19257-201ENSMUST00000186121 183 ntBASIC2□□□□□ -2.09
Hoxd3P09027 Gm43865-201ENSMUST00000204721 127 ntBASIC2□□□□□ -2.09
Hoxd3P09027 AC132384.11-201ENSMUST00000219676 178 ntBASIC2□□□□□ -2.09
Hoxd3P09027 Gm26494-201ENSMUST00000083154 143 ntBASIC2□□□□□ -2.09
Hoxd3P09027 Gm24493-201ENSMUST00000083805 143 ntBASIC2□□□□□ -2.09
Hoxd3P09027 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
Hoxd3P09027 Gm22544-201ENSMUST00000104349 127 ntBASIC1.99□□□□□ -2.09
Hoxd3P09027 Mir1949-201ENSMUST00000157434 141 ntBASIC1.99□□□□□ -2.09
Hoxd3P09027 Gm22416-201ENSMUST00000158590 88 ntBASIC1.99□□□□□ -2.09
Hoxd3P09027 Gm25119-201ENSMUST00000158815 88 ntBASIC1.99□□□□□ -2.09
Hoxd3P09027 Gm22500-201ENSMUST00000158982 99 ntBASIC1.99□□□□□ -2.09
Hoxd3P09027 Snord7-201ENSMUST00000083781 97 ntBASIC1.99□□□□□ -2.09
Hoxd3P09027 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.99□□□□□ -2.09
Hoxd3P09027 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Hoxd3P09027 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Hoxd3P09027 Gm26411-201ENSMUST00000157668 107 ntBASIC1.98□□□□□ -2.09
Hoxd3P09027 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.98□□□□□ -2.09
Hoxd3P09027 Mir3103-201ENSMUST00000175474 67 ntBASIC1.98□□□□□ -2.09
Hoxd3P09027 Gm22802-201ENSMUST00000175621 89 ntBASIC1.98□□□□□ -2.09
Hoxd3P09027 Mir509-201ENSMUST00000196089 75 ntBASIC1.98□□□□□ -2.09
Hoxd3P09027 Gm24406-201ENSMUST00000083026 128 ntBASIC1.98□□□□□ -2.09
Hoxd3P09027 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Hoxd3P09027 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
Hoxd3P09027 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Hoxd3P09027 Mir92-1-201ENSMUST00000102108 80 ntBASIC1.97□□□□□ -2.09
Hoxd3P09027 Gm24670-201ENSMUST00000104154 132 ntBASIC1.97□□□□□ -2.09
Hoxd3P09027 Gm26341-201ENSMUST00000104561 134 ntBASIC1.97□□□□□ -2.09
Hoxd3P09027 Gm22403-201ENSMUST00000174919 84 ntBASIC1.97□□□□□ -2.09
Hoxd3P09027 Gm22914-201ENSMUST00000175195 77 ntBASIC1.97□□□□□ -2.09
Hoxd3P09027 Mir3064-201ENSMUST00000175532 67 ntBASIC1.97□□□□□ -2.09
Hoxd3P09027 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Hoxd3P09027 Gm25870-201ENSMUST00000179845 79 ntBASIC1.97□□□□□ -2.09
Hoxd3P09027 Mir7683-201ENSMUST00000183842 61 ntBASIC1.97□□□□□ -2.09
Hoxd3P09027 Gm38295-201ENSMUST00000191951 151 ntBASIC1.97□□□□□ -2.09
Hoxd3P09027 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.97□□□□□ -2.09
Hoxd3P09027 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 265.3 ms