Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gm22606-201ENSMUST00000158290 103 ntBASIC0.72□□□□□ -2.29
Trav13n-4A0A0G2JG01 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.72□□□□□ -2.29
Trav13n-4A0A0G2JG01 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.72□□□□□ -2.29
Trav13n-4A0A0G2JG01 Gm27446-201ENSMUST00000183963 89 ntBASIC0.72□□□□□ -2.29
Trav13n-4A0A0G2JG01 Gm25378-201ENSMUST00000104333 129 ntBASIC0.71□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm15654-201ENSMUST00000152660 300 ntBASIC0.71□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm22796-201ENSMUST00000157234 106 ntBASIC0.71□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm23209-201ENSMUST00000158667 110 ntBASIC0.71□□□□□ -2.3
Trav13n-4A0A0G2JG01 Mir1966-201ENSMUST00000158807 108 ntBASIC0.71□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm23337-201ENSMUST00000158959 118 ntBASIC0.71□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm25444-201ENSMUST00000158999 113 ntBASIC0.71□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm22466-201ENSMUST00000175278 69 ntBASIC0.71□□□□□ -2.3
Trav13n-4A0A0G2JG01 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.71□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm44338-201ENSMUST00000198614 110 ntBASIC0.71□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm43944-201ENSMUST00000205220 120 ntBASIC0.71□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm26225-201ENSMUST00000082508 135 ntBASIC0.71□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.71□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm22786-201ENSMUST00000104086 122 ntBASIC0.7□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm14626-201ENSMUST00000117619 216 ntBASIC0.7□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm22337-201ENSMUST00000157721 132 ntBASIC0.7□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm20386-201ENSMUST00000174010 132 ntBASIC0.7□□□□□ -2.3
Trav13n-4A0A0G2JG01 Mir6364-201ENSMUST00000183396 86 ntBASIC0.7□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm28435-201ENSMUST00000185496 108 ntBASIC0.7□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm18665-201ENSMUST00000189783 270 ntBASIC0.7□□□□□ -2.3
Trav13n-4A0A0G2JG01 Snord33-201ENSMUST00000083694 84 ntBASIC0.7□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm22469-201ENSMUST00000104118 133 ntBASIC0.69□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm14946-201ENSMUST00000119859 296 ntBASIC0.69□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm24131-201ENSMUST00000158539 107 ntBASIC0.69□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm24549-201ENSMUST00000158647 139 ntBASIC0.69□□□□□ -2.3
Trav13n-4A0A0G2JG01 Mir6369-201ENSMUST00000183772 106 ntBASIC0.69□□□□□ -2.3
Trav13n-4A0A0G2JG01 Mir6380-201ENSMUST00000184334 81 ntBASIC0.69□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm27587-201ENSMUST00000185116 163 ntBASIC0.69□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm25138-201ENSMUST00000083248 136 ntBASIC0.69□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm22973-201ENSMUST00000083298 191 ntBASIC0.69□□□□□ -2.3
Trav13n-4A0A0G2JG01 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm25980-201ENSMUST00000157176 218 ntBASIC0.68□□□□□ -2.3
Trav13n-4A0A0G2JG01 Mir6390-201ENSMUST00000184405 129 ntBASIC0.68□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm36956-201ENSMUST00000193830 214 ntBASIC0.68□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.68□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm25410-201ENSMUST00000083758 137 ntBASIC0.68□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm6985-201ENSMUST00000121255 271 ntBASIC0.67□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm24750-201ENSMUST00000157843 104 ntBASIC0.67□□□□□ -2.3
Trav13n-4A0A0G2JG01 Mir30f-201ENSMUST00000196073 92 ntBASIC0.67□□□□□ -2.3
Trav13n-4A0A0G2JG01 Mir3969-201ENSMUST00000197106 92 ntBASIC0.67□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm44211-201ENSMUST00000204867 145 ntBASIC0.67□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm22169-201ENSMUST00000083229 107 ntBASIC0.67□□□□□ -2.3
Trav13n-4A0A0G2JG01 Mir20b-201ENSMUST00000102087 80 ntBASIC0.66□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm22689-201ENSMUST00000102452 110 ntBASIC0.66□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm25416-201ENSMUST00000104221 107 ntBASIC0.66□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm25599-201ENSMUST00000157816 103 ntBASIC0.66□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm17020-201ENSMUST00000172274 274 ntBASIC0.66□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm23416-201ENSMUST00000175520 95 ntBASIC0.66□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm37330-201ENSMUST00000192606 153 ntBASIC0.66□□□□□ -2.3
Trav13n-4A0A0G2JG01 Snord60-201ENSMUST00000082834 78 ntBASIC0.66□□□□□ -2.3
Trav13n-4A0A0G2JG01 Gm24030-201ENSMUST00000083931 164 ntBASIC0.66□□□□□ -2.3
Trav13n-4A0A0G2JG01 Scarna9-201ENSMUST00000104318 70 ntBASIC0.65□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm25716-201ENSMUST00000158628 104 ntBASIC0.65□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm23008-201ENSMUST00000158946 80 ntBASIC0.65□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm27792-201ENSMUST00000184031 115 ntBASIC0.65□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm27993-201ENSMUST00000184362 85 ntBASIC0.65□□□□□ -2.31
Trav13n-4A0A0G2JG01 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Trav13n-4A0A0G2JG01 Mir7657-201ENSMUST00000196051 57 ntBASIC0.65□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm24920-201ENSMUST00000083018 85 ntBASIC0.65□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm22753-201ENSMUST00000083657 107 ntBASIC0.65□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm25787-201ENSMUST00000104709 92 ntBASIC0.64□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm22105-201ENSMUST00000116734 116 ntBASIC0.64□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm15289-201ENSMUST00000117793 244 ntBASIC0.64□□□□□ -2.31
Trav13n-4A0A0G2JG01 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.64□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm24747-201ENSMUST00000157835 87 ntBASIC0.64□□□□□ -2.31
Trav13n-4A0A0G2JG01 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.64□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm38113-201ENSMUST00000193704 201 ntBASIC0.64□□□□□ -2.31
Trav13n-4A0A0G2JG01 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.64□□□□□ -2.31
Trav13n-4A0A0G2JG01 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.64□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm24579-201ENSMUST00000103964 144 ntBASIC0.63□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm23989-201ENSMUST00000117030 66 ntBASIC0.63□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm23990-201ENSMUST00000117031 117 ntBASIC0.63□□□□□ -2.31
Trav13n-4A0A0G2JG01 Mir1899-201ENSMUST00000122798 96 ntBASIC0.63□□□□□ -2.31
Trav13n-4A0A0G2JG01 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm22139-201ENSMUST00000158747 105 ntBASIC0.63□□□□□ -2.31
Trav13n-4A0A0G2JG01 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.63□□□□□ -2.31
Trav13n-4A0A0G2JG01 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.63□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm23320-201ENSMUST00000104462 127 ntBASIC0.62□□□□□ -2.31
Trav13n-4A0A0G2JG01 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.62□□□□□ -2.31
Trav13n-4A0A0G2JG01 Mir6389-201ENSMUST00000183661 102 ntBASIC0.62□□□□□ -2.31
Trav13n-4A0A0G2JG01 Mir7079-201ENSMUST00000184697 69 ntBASIC0.62□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm37545-201ENSMUST00000186512 148 ntBASIC0.62□□□□□ -2.31
Trav13n-4A0A0G2JG01 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.62□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm10172-201ENSMUST00000085929 558 ntBASIC0.62□□□□□ -2.31
Trav13n-4A0A0G2JG01 Snord90-201ENSMUST00000104568 111 ntBASIC0.61□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm22373-201ENSMUST00000104584 89 ntBASIC0.61□□□□□ -2.31
Trav13n-4A0A0G2JG01 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.61□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm13577-201ENSMUST00000121365 205 ntBASIC0.61□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm23783-201ENSMUST00000157941 102 ntBASIC0.61□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm24054-201ENSMUST00000158619 105 ntBASIC0.61□□□□□ -2.31
Trav13n-4A0A0G2JG01 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.61□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm27289-201ENSMUST00000183341 82 ntBASIC0.61□□□□□ -2.31
Trav13n-4A0A0G2JG01 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.61□□□□□ -2.31
Trav13n-4A0A0G2JG01 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.61□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.61□□□□□ -2.31
Trav13n-4A0A0G2JG01 Gm23126-201ENSMUST00000104260 134 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 135 ms