Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm22087-201ENSMUST00000158339 88 ntBASIC0.09□□□□□ -2.4
Cldn9Q9Z0S7 Gm25952-201ENSMUST00000175329 74 ntBASIC0.09□□□□□ -2.4
Cldn9Q9Z0S7 Gm25248-201ENSMUST00000175473 98 ntBASIC0.09□□□□□ -2.4
Cldn9Q9Z0S7 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
Cldn9Q9Z0S7 Snord49b-201ENSMUST00000082503 72 ntBASIC0.09□□□□□ -2.4
Cldn9Q9Z0S7 Gm24468-201ENSMUST00000104489 104 ntBASIC0.08□□□□□ -2.4
Cldn9Q9Z0S7 Gm6952-201ENSMUST00000118629 159 ntBASIC0.08□□□□□ -2.4
Cldn9Q9Z0S7 Gm22815-201ENSMUST00000157451 62 ntBASIC0.08□□□□□ -2.4
Cldn9Q9Z0S7 Gm26168-201ENSMUST00000083787 112 ntBASIC0.08□□□□□ -2.4
Cldn9Q9Z0S7 Mir672-201ENSMUST00000102331 100 ntBASIC0.07□□□□□ -2.4
Cldn9Q9Z0S7 Gm13345-201ENSMUST00000121928 228 ntBASIC0.07□□□□□ -2.4
Cldn9Q9Z0S7 Gm27845-201ENSMUST00000184479 114 ntBASIC0.07□□□□□ -2.4
Cldn9Q9Z0S7 Gm28767-201ENSMUST00000188601 114 ntBASIC0.07□□□□□ -2.4
Cldn9Q9Z0S7 Gm38208-201ENSMUST00000192476 114 ntBASIC0.07□□□□□ -2.4
Cldn9Q9Z0S7 Gm6607-201ENSMUST00000215035 328 ntBASIC0.07□□□□□ -2.4
Cldn9Q9Z0S7 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.07□□□□□ -2.4
Cldn9Q9Z0S7 Gm23301-201ENSMUST00000082713 65 ntBASIC0.07□□□□□ -2.4
Cldn9Q9Z0S7 Gm11322-201ENSMUST00000118095 435 ntBASIC0.06□□□□□ -2.4
Cldn9Q9Z0S7 Gm11388-201ENSMUST00000120908 159 ntBASIC0.06□□□□□ -2.4
Cldn9Q9Z0S7 Mir6336-201ENSMUST00000183581 130 ntBASIC0.06□□□□□ -2.4
Cldn9Q9Z0S7 Gm44455-201ENSMUST00000200061 82 ntBASIC0.06□□□□□ -2.4
Cldn9Q9Z0S7 Gm19790-201ENSMUST00000214414 251 ntBASIC0.06□□□□□ -2.4
Cldn9Q9Z0S7 Gm23690-201ENSMUST00000083036 94 ntBASIC0.06□□□□□ -2.4
Cldn9Q9Z0S7 Gm24929-201ENSMUST00000083403 139 ntBASIC0.06□□□□□ -2.4
Cldn9Q9Z0S7 Gm14567-201ENSMUST00000117155 174 ntBASIC0.05□□□□□ -2.4
Cldn9Q9Z0S7 Gm22434-201ENSMUST00000158549 122 ntBASIC0.05□□□□□ -2.4
Cldn9Q9Z0S7 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.05□□□□□ -2.4
Cldn9Q9Z0S7 Gm25935-201ENSMUST00000178746 107 ntBASIC0.05□□□□□ -2.4
Cldn9Q9Z0S7 Gm27993-201ENSMUST00000184362 85 ntBASIC0.05□□□□□ -2.4
Cldn9Q9Z0S7 Gm6003-201ENSMUST00000187903 463 ntBASIC0.05□□□□□ -2.4
Cldn9Q9Z0S7 Snord95-201ENSMUST00000082846 68 ntBASIC0.05□□□□□ -2.4
Cldn9Q9Z0S7 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Cldn9Q9Z0S7 Snord100-201ENSMUST00000116836 74 ntBASIC0.04□□□□□ -2.4
Cldn9Q9Z0S7 Gm14792-201ENSMUST00000119725 258 ntBASIC0.04□□□□□ -2.4
Cldn9Q9Z0S7 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.04□□□□□ -2.4
Cldn9Q9Z0S7 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Cldn9Q9Z0S7 Gm24256-201ENSMUST00000083696 84 ntBASIC0.04□□□□□ -2.4
Cldn9Q9Z0S7 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.04□□□□□ -2.4
Cldn9Q9Z0S7 Mir670-201ENSMUST00000102380 100 ntBASIC0.03□□□□□ -2.4
Cldn9Q9Z0S7 Mir466f-3-201ENSMUST00000104788 94 ntBASIC0.03□□□□□ -2.4
Cldn9Q9Z0S7 Gm22942-201ENSMUST00000158563 124 ntBASIC0.03□□□□□ -2.4
Cldn9Q9Z0S7 Gm25464-201ENSMUST00000175481 107 ntBASIC0.03□□□□□ -2.4
Cldn9Q9Z0S7 Gm25596-201ENSMUST00000178368 107 ntBASIC0.03□□□□□ -2.4
Cldn9Q9Z0S7 Gm27585-201ENSMUST00000183717 199 ntBASIC0.03□□□□□ -2.4
Cldn9Q9Z0S7 Gm27735-201ENSMUST00000185085 76 ntBASIC0.03□□□□□ -2.4
Cldn9Q9Z0S7 Gm37330-201ENSMUST00000192606 153 ntBASIC0.03□□□□□ -2.4
Cldn9Q9Z0S7 Mir181a-2-201ENSMUST00000083489 76 ntBASIC0.03□□□□□ -2.4
Cldn9Q9Z0S7 Gm24867-201ENSMUST00000104161 107 ntBASIC0.02□□□□□ -2.41
Cldn9Q9Z0S7 Scarna9-201ENSMUST00000104318 70 ntBASIC0.02□□□□□ -2.41
Cldn9Q9Z0S7 Gm24372-201ENSMUST00000104400 110 ntBASIC0.02□□□□□ -2.41
Cldn9Q9Z0S7 Gm23821-201ENSMUST00000158738 106 ntBASIC0.02□□□□□ -2.41
Cldn9Q9Z0S7 Gm24575-201ENSMUST00000175502 77 ntBASIC0.02□□□□□ -2.41
Cldn9Q9Z0S7 Gm24488-201ENSMUST00000179934 127 ntBASIC0.02□□□□□ -2.41
Cldn9Q9Z0S7 Gm25701-201ENSMUST00000179988 127 ntBASIC0.02□□□□□ -2.41
Cldn9Q9Z0S7 Gm26431-201ENSMUST00000180199 127 ntBASIC0.02□□□□□ -2.41
Cldn9Q9Z0S7 Gm27943-201ENSMUST00000184844 116 ntBASIC0.02□□□□□ -2.41
Cldn9Q9Z0S7 Gm38364-201ENSMUST00000191814 179 ntBASIC0.02□□□□□ -2.41
Cldn9Q9Z0S7 Mir721-201ENSMUST00000200230 88 ntBASIC0.02□□□□□ -2.41
Cldn9Q9Z0S7 Gm24460-201ENSMUST00000082731 106 ntBASIC0.02□□□□□ -2.41
Cldn9Q9Z0S7 Gm23451-201ENSMUST00000083328 122 ntBASIC0.02□□□□□ -2.41
Cldn9Q9Z0S7 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.02□□□□□ -2.41
Cldn9Q9Z0S7 Mir574-201ENSMUST00000103854 78 ntBASIC0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm24587-201ENSMUST00000116697 89 ntBASIC0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm24321-201ENSMUST00000175348 80 ntBASIC0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm28001-201ENSMUST00000183561 117 ntBASIC0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Cldn9Q9Z0S7 mt-Tr-201ENSMUST00000082412 68 ntBASIC0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm25894-201ENSMUST00000083458 75 ntBASIC0.01□□□□□ -2.41
Cldn9Q9Z0S7 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.01□□□□□ -2.41
Cldn9Q9Z0S7 Mir146-201ENSMUST00000083667 65 ntBASIC0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm24030-201ENSMUST00000083931 164 ntBASIC0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm24278-201ENSMUST00000104239 127 ntBASIC0□□□□□ -2.41
Cldn9Q9Z0S7 Mir1899-201ENSMUST00000122798 96 ntBASIC0□□□□□ -2.41
Cldn9Q9Z0S7 Gm25267-201ENSMUST00000158522 63 ntBASIC0□□□□□ -2.41
Cldn9Q9Z0S7 Gm23581-201ENSMUST00000158531 63 ntBASIC0□□□□□ -2.41
Cldn9Q9Z0S7 Gm16550-201ENSMUST00000162550 126 ntBASIC0□□□□□ -2.41
Cldn9Q9Z0S7 Mir3105-201ENSMUST00000175480 85 ntBASIC0□□□□□ -2.41
Cldn9Q9Z0S7 Gm28925-201ENSMUST00000188586 168 ntBASIC0□□□□□ -2.41
Cldn9Q9Z0S7 CT030645.1-201ENSMUST00000224020 231 ntBASIC0□□□□□ -2.41
Cldn9Q9Z0S7 Mir377-201ENSMUST00000083504 68 ntBASIC0□□□□□ -2.41
Cldn9Q9Z0S7 Mir411-201ENSMUST00000083543 82 ntBASIC0□□□□□ -2.41
Cldn9Q9Z0S7 Mir384-201ENSMUST00000083565 88 ntBASIC0□□□□□ -2.41
Cldn9Q9Z0S7 Gm10172-201ENSMUST00000085929 558 ntBASIC0□□□□□ -2.41
Cldn9Q9Z0S7 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm24047-201ENSMUST00000102405 104 ntBASIC-0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm26026-201ENSMUST00000122726 123 ntBASIC-0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm23579-201ENSMUST00000158528 103 ntBASIC-0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm26160-201ENSMUST00000158965 63 ntBASIC-0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.01□□□□□ -2.41
Cldn9Q9Z0S7 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.01□□□□□ -2.41
Cldn9Q9Z0S7 Gm23345-201ENSMUST00000083817 150 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 148.2 ms