Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.17□□□□□ -2.44
Trem1Q9JKE2 Mir7079-201ENSMUST00000184697 69 ntBASIC-0.17□□□□□ -2.44
Trem1Q9JKE2 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.17□□□□□ -2.44
Trem1Q9JKE2 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.17□□□□□ -2.44
Trem1Q9JKE2 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.17□□□□□ -2.44
Trem1Q9JKE2 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.17□□□□□ -2.44
Trem1Q9JKE2 CT030645.1-201ENSMUST00000224020 231 ntBASIC-0.17□□□□□ -2.44
Trem1Q9JKE2 AC154213.2-201ENSMUST00000227138 187 ntBASIC-0.17□□□□□ -2.44
Trem1Q9JKE2 Mir18-201ENSMUST00000083469 96 ntBASIC-0.17□□□□□ -2.44
Trem1Q9JKE2 Mir875-201ENSMUST00000104698 78 ntBASIC-0.18□□□□□ -2.44
Trem1Q9JKE2 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.18□□□□□ -2.44
Trem1Q9JKE2 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.18□□□□□ -2.44
Trem1Q9JKE2 Mir672-201ENSMUST00000102331 100 ntBASIC-0.19□□□□□ -2.44
Trem1Q9JKE2 Gm23214-201ENSMUST00000122716 157 ntBASIC-0.19□□□□□ -2.44
Trem1Q9JKE2 Gm25267-201ENSMUST00000158522 63 ntBASIC-0.19□□□□□ -2.44
Trem1Q9JKE2 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.19□□□□□ -2.44
Trem1Q9JKE2 Gm26160-201ENSMUST00000158965 63 ntBASIC-0.19□□□□□ -2.44
Trem1Q9JKE2 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.19□□□□□ -2.44
Trem1Q9JKE2 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.19□□□□□ -2.44
Trem1Q9JKE2 Gm24765-201ENSMUST00000083691 103 ntBASIC-0.19□□□□□ -2.44
Trem1Q9JKE2 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.19□□□□□ -2.44
Trem1Q9JKE2 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.2□□□□□ -2.44
Trem1Q9JKE2 Gm11388-201ENSMUST00000120908 159 ntBASIC-0.2□□□□□ -2.44
Trem1Q9JKE2 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.2□□□□□ -2.44
Trem1Q9JKE2 Gm25364-201ENSMUST00000158851 107 ntBASIC-0.2□□□□□ -2.44
Trem1Q9JKE2 Gm23567-201ENSMUST00000178005 107 ntBASIC-0.2□□□□□ -2.44
Trem1Q9JKE2 Mir6336-201ENSMUST00000183581 130 ntBASIC-0.2□□□□□ -2.44
Trem1Q9JKE2 Gm27585-201ENSMUST00000183717 199 ntBASIC-0.2□□□□□ -2.44
Trem1Q9JKE2 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.2□□□□□ -2.44
Trem1Q9JKE2 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.2□□□□□ -2.44
Trem1Q9JKE2 Mir146-201ENSMUST00000083667 65 ntBASIC-0.2□□□□□ -2.44
Trem1Q9JKE2 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.2□□□□□ -2.44
Trem1Q9JKE2 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.2□□□□□ -2.44
Trem1Q9JKE2 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-0.2□□□□□ -2.44
Trem1Q9JKE2 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.21□□□□□ -2.44
Trem1Q9JKE2 Gm25111-201ENSMUST00000116686 147 ntBASIC-0.21□□□□□ -2.44
Trem1Q9JKE2 Gm12686-201ENSMUST00000120546 397 ntBASIC-0.21□□□□□ -2.44
Trem1Q9JKE2 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
Trem1Q9JKE2 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.21□□□□□ -2.44
Trem1Q9JKE2 Ighv12-2-201ENSMUST00000191949 362 ntBASIC-0.21□□□□□ -2.44
Trem1Q9JKE2 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.21□□□□□ -2.44
Trem1Q9JKE2 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.21□□□□□ -2.44
Trem1Q9JKE2 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.22□□□□□ -2.44
Trem1Q9JKE2 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.22□□□□□ -2.44
Trem1Q9JKE2 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.22□□□□□ -2.44
Trem1Q9JKE2 Gm22332-201ENSMUST00000158072 126 ntBASIC-0.22□□□□□ -2.44
Trem1Q9JKE2 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.22□□□□□ -2.44
Trem1Q9JKE2 Gm24761-201ENSMUST00000179589 127 ntBASIC-0.22□□□□□ -2.44
Trem1Q9JKE2 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.22□□□□□ -2.44
Trem1Q9JKE2 Gm25588-201ENSMUST00000082501 140 ntBASIC-0.22□□□□□ -2.44
Trem1Q9JKE2 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.22□□□□□ -2.44
Trem1Q9JKE2 Mir384-201ENSMUST00000083565 88 ntBASIC-0.22□□□□□ -2.44
Trem1Q9JKE2 Gm24764-201ENSMUST00000083686 199 ntBASIC-0.22□□□□□ -2.44
Trem1Q9JKE2 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
Trem1Q9JKE2 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.23□□□□□ -2.45
Trem1Q9JKE2 Gm11322-201ENSMUST00000118095 435 ntBASIC-0.23□□□□□ -2.45
Trem1Q9JKE2 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.23□□□□□ -2.45
Trem1Q9JKE2 Gm11420-201ENSMUST00000120047 402 ntBASIC-0.23□□□□□ -2.45
Trem1Q9JKE2 Gm24594-201ENSMUST00000122502 99 ntBASIC-0.23□□□□□ -2.45
Trem1Q9JKE2 Gm22479-201ENSMUST00000122566 81 ntBASIC-0.23□□□□□ -2.45
Trem1Q9JKE2 Gm22790-201ENSMUST00000157229 129 ntBASIC-0.23□□□□□ -2.45
Trem1Q9JKE2 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.23□□□□□ -2.45
Trem1Q9JKE2 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.23□□□□□ -2.45
Trem1Q9JKE2 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.23□□□□□ -2.45
Trem1Q9JKE2 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.23□□□□□ -2.45
Trem1Q9JKE2 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.23□□□□□ -2.45
Trem1Q9JKE2 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.23□□□□□ -2.45
Trem1Q9JKE2 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.23□□□□□ -2.45
Trem1Q9JKE2 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
Trem1Q9JKE2 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.24□□□□□ -2.45
Trem1Q9JKE2 Gm22216-201ENSMUST00000157557 114 ntBASIC-0.24□□□□□ -2.45
Trem1Q9JKE2 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.24□□□□□ -2.45
Trem1Q9JKE2 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.24□□□□□ -2.45
Trem1Q9JKE2 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.24□□□□□ -2.45
Trem1Q9JKE2 Mir6928-201ENSMUST00000185166 70 ntBASIC-0.24□□□□□ -2.45
Trem1Q9JKE2 Gm44308-201ENSMUST00000197080 99 ntBASIC-0.24□□□□□ -2.45
Trem1Q9JKE2 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.24□□□□□ -2.45
Trem1Q9JKE2 Gm25512-201ENSMUST00000083863 107 ntBASIC-0.24□□□□□ -2.45
Trem1Q9JKE2 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.25□□□□□ -2.45
Trem1Q9JKE2 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.25□□□□□ -2.45
Trem1Q9JKE2 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.25□□□□□ -2.45
Trem1Q9JKE2 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.25□□□□□ -2.45
Trem1Q9JKE2 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.25□□□□□ -2.45
Trem1Q9JKE2 Gm26026-201ENSMUST00000122726 123 ntBASIC-0.25□□□□□ -2.45
Trem1Q9JKE2 Gm22491-201ENSMUST00000157190 102 ntBASIC-0.25□□□□□ -2.45
Trem1Q9JKE2 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.25□□□□□ -2.45
Trem1Q9JKE2 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.25□□□□□ -2.45
Trem1Q9JKE2 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.25□□□□□ -2.45
Trem1Q9JKE2 Snora75-201ENSMUST00000082903 133 ntBASIC-0.25□□□□□ -2.45
Trem1Q9JKE2 Gm24762-201ENSMUST00000083689 104 ntBASIC-0.25□□□□□ -2.45
Trem1Q9JKE2 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.25□□□□□ -2.45
Trem1Q9JKE2 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.26□□□□□ -2.45
Trem1Q9JKE2 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.26□□□□□ -2.45
Trem1Q9JKE2 Mir669d-2-201ENSMUST00000116854 86 ntBASIC-0.26□□□□□ -2.45
Trem1Q9JKE2 n-R5s87-201ENSMUST00000122752 116 ntBASIC-0.26□□□□□ -2.45
Trem1Q9JKE2 Gm28016-201ENSMUST00000184594 196 ntBASIC-0.26□□□□□ -2.45
Trem1Q9JKE2 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.26□□□□□ -2.45
Trem1Q9JKE2 Mir191-201ENSMUST00000196210 74 ntBASIC-0.26□□□□□ -2.45
Trem1Q9JKE2 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
Trem1Q9JKE2 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 279 ms