Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Mir6364-201ENSMUST00000183396 86 ntBASIC0.74□□□□□ -2.29
Scn5aQ9JJV9 Mir6350-201ENSMUST00000183639 105 ntBASIC0.74□□□□□ -2.29
Scn5aQ9JJV9 Gm44338-201ENSMUST00000198614 110 ntBASIC0.74□□□□□ -2.29
Scn5aQ9JJV9 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.74□□□□□ -2.29
Scn5aQ9JJV9 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.74□□□□□ -2.29
Scn5aQ9JJV9 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.74□□□□□ -2.29
Scn5aQ9JJV9 Gm23375-201ENSMUST00000175407 83 ntBASIC0.74□□□□□ -2.29
Scn5aQ9JJV9 Mir6481-201ENSMUST00000184617 110 ntBASIC0.74□□□□□ -2.29
Scn5aQ9JJV9 Gm42623-201ENSMUST00000197225 379 ntBASIC0.74□□□□□ -2.29
Scn5aQ9JJV9 Gm25663-201ENSMUST00000157698 135 ntBASIC0.73□□□□□ -2.29
Scn5aQ9JJV9 Gm25654-201ENSMUST00000158467 88 ntBASIC0.73□□□□□ -2.29
Scn5aQ9JJV9 Gm24547-201ENSMUST00000158649 149 ntBASIC0.73□□□□□ -2.29
Scn5aQ9JJV9 Gm20391-201ENSMUST00000174722 106 ntBASIC0.73□□□□□ -2.29
Scn5aQ9JJV9 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Scn5aQ9JJV9 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.73□□□□□ -2.29
Scn5aQ9JJV9 Gm24494-201ENSMUST00000083804 81 ntBASIC0.73□□□□□ -2.29
Scn5aQ9JJV9 Snord89-201ENSMUST00000104516 110 ntBASIC0.72□□□□□ -2.29
Scn5aQ9JJV9 Mir1298-201ENSMUST00000116681 98 ntBASIC0.72□□□□□ -2.29
Scn5aQ9JJV9 Gm22337-201ENSMUST00000157721 132 ntBASIC0.72□□□□□ -2.29
Scn5aQ9JJV9 Gm23114-201ENSMUST00000158478 117 ntBASIC0.72□□□□□ -2.29
Scn5aQ9JJV9 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Scn5aQ9JJV9 Gm23735-201ENSMUST00000082551 134 ntBASIC0.72□□□□□ -2.29
Scn5aQ9JJV9 Gm14626-201ENSMUST00000117619 216 ntBASIC0.72□□□□□ -2.29
Scn5aQ9JJV9 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.72□□□□□ -2.29
Scn5aQ9JJV9 Gm15654-201ENSMUST00000152660 300 ntBASIC0.72□□□□□ -2.29
Scn5aQ9JJV9 Gm22431-201ENSMUST00000158545 107 ntBASIC0.72□□□□□ -2.29
Scn5aQ9JJV9 Gm27980-201ENSMUST00000184094 169 ntBASIC0.72□□□□□ -2.29
Scn5aQ9JJV9 Gm44358-201ENSMUST00000196301 98 ntBASIC0.72□□□□□ -2.29
Scn5aQ9JJV9 Gm44322-201ENSMUST00000196830 115 ntBASIC0.72□□□□□ -2.29
Scn5aQ9JJV9 Gm14838-201ENSMUST00000118913 248 ntBASIC0.71□□□□□ -2.3
Scn5aQ9JJV9 Gm22796-201ENSMUST00000157234 106 ntBASIC0.71□□□□□ -2.3
Scn5aQ9JJV9 Gm25882-201ENSMUST00000157784 85 ntBASIC0.71□□□□□ -2.3
Scn5aQ9JJV9 Gm26090-201ENSMUST00000157897 128 ntBASIC0.71□□□□□ -2.3
Scn5aQ9JJV9 Gm27365-201ENSMUST00000184041 177 ntBASIC0.71□□□□□ -2.3
Scn5aQ9JJV9 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.71□□□□□ -2.3
Scn5aQ9JJV9 Gm8219-201ENSMUST00000218309 242 ntBASIC0.71□□□□□ -2.3
Scn5aQ9JJV9 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.71□□□□□ -2.3
Scn5aQ9JJV9 Mir201-201ENSMUST00000083470 66 ntBASIC0.71□□□□□ -2.3
Scn5aQ9JJV9 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.71□□□□□ -2.3
Scn5aQ9JJV9 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Scn5aQ9JJV9 Gm24777-201ENSMUST00000157644 107 ntBASIC0.71□□□□□ -2.3
Scn5aQ9JJV9 Gm18213-201ENSMUST00000207850 178 ntBASIC0.71□□□□□ -2.3
Scn5aQ9JJV9 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.71□□□□□ -2.3
Scn5aQ9JJV9 Snord32a-201ENSMUST00000083285 83 ntBASIC0.71□□□□□ -2.3
Scn5aQ9JJV9 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Scn5aQ9JJV9 Gm22914-201ENSMUST00000175195 77 ntBASIC0.7□□□□□ -2.3
Scn5aQ9JJV9 Gm22911-201ENSMUST00000177920 107 ntBASIC0.7□□□□□ -2.3
Scn5aQ9JJV9 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Scn5aQ9JJV9 Gm28256-201ENSMUST00000188953 139 ntBASIC0.7□□□□□ -2.3
Scn5aQ9JJV9 Gm28559-201ENSMUST00000190532 139 ntBASIC0.7□□□□□ -2.3
Scn5aQ9JJV9 Mir3969-201ENSMUST00000197106 92 ntBASIC0.7□□□□□ -2.3
Scn5aQ9JJV9 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.7□□□□□ -2.3
Scn5aQ9JJV9 Gm22809-201ENSMUST00000082743 156 ntBASIC0.7□□□□□ -2.3
Scn5aQ9JJV9 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.7□□□□□ -2.3
Scn5aQ9JJV9 Gm10172-201ENSMUST00000085929 558 ntBASIC0.7□□□□□ -2.3
Scn5aQ9JJV9 Gm22790-201ENSMUST00000157229 129 ntBASIC0.69□□□□□ -2.3
Scn5aQ9JJV9 Gm25364-201ENSMUST00000158851 107 ntBASIC0.69□□□□□ -2.3
Scn5aQ9JJV9 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Scn5aQ9JJV9 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.69□□□□□ -2.3
Scn5aQ9JJV9 Gm27699-201ENSMUST00000183553 180 ntBASIC0.69□□□□□ -2.3
Scn5aQ9JJV9 Mir30f-201ENSMUST00000196073 92 ntBASIC0.69□□□□□ -2.3
Scn5aQ9JJV9 Snora41-201ENSMUST00000082668 132 ntBASIC0.69□□□□□ -2.3
Scn5aQ9JJV9 Mir302d-201ENSMUST00000083513 66 ntBASIC0.69□□□□□ -2.3
Scn5aQ9JJV9 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.69□□□□□ -2.3
Scn5aQ9JJV9 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.69□□□□□ -2.3
Scn5aQ9JJV9 Gm44462-201ENSMUST00000199696 129 ntBASIC0.69□□□□□ -2.3
Scn5aQ9JJV9 Gm23320-201ENSMUST00000104462 127 ntBASIC0.68□□□□□ -2.3
Scn5aQ9JJV9 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Scn5aQ9JJV9 Gm27974-201ENSMUST00000183415 105 ntBASIC0.68□□□□□ -2.3
Scn5aQ9JJV9 Mir7079-201ENSMUST00000184697 69 ntBASIC0.68□□□□□ -2.3
Scn5aQ9JJV9 Mir468-201ENSMUST00000197332 78 ntBASIC0.68□□□□□ -2.3
Scn5aQ9JJV9 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.68□□□□□ -2.3
Scn5aQ9JJV9 Gm22802-201ENSMUST00000175621 89 ntBASIC0.67□□□□□ -2.3
Scn5aQ9JJV9 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.67□□□□□ -2.3
Scn5aQ9JJV9 Snord69-201ENSMUST00000104024 80 ntBASIC0.67□□□□□ -2.3
Scn5aQ9JJV9 Gm26274-201ENSMUST00000157103 321 ntBASIC0.67□□□□□ -2.3
Scn5aQ9JJV9 Gm38113-201ENSMUST00000193704 201 ntBASIC0.67□□□□□ -2.3
Scn5aQ9JJV9 Gm23130-201ENSMUST00000104252 74 ntBASIC0.66□□□□□ -2.3
Scn5aQ9JJV9 Snord90-201ENSMUST00000104568 111 ntBASIC0.66□□□□□ -2.3
Scn5aQ9JJV9 Gm14567-201ENSMUST00000117155 174 ntBASIC0.66□□□□□ -2.3
Scn5aQ9JJV9 Gm23567-201ENSMUST00000178005 107 ntBASIC0.66□□□□□ -2.3
Scn5aQ9JJV9 Gm43898-201ENSMUST00000204456 424 ntBASIC0.66□□□□□ -2.3
Scn5aQ9JJV9 Gm23299-201ENSMUST00000082708 79 ntBASIC0.66□□□□□ -2.3
Scn5aQ9JJV9 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Scn5aQ9JJV9 Mir669b-201ENSMUST00000102172 97 ntBASIC0.65□□□□□ -2.3
Scn5aQ9JJV9 Snord72-201ENSMUST00000104549 81 ntBASIC0.65□□□□□ -2.3
Scn5aQ9JJV9 Gm25980-201ENSMUST00000157176 218 ntBASIC0.65□□□□□ -2.3
Scn5aQ9JJV9 Mir3079-201ENSMUST00000175428 90 ntBASIC0.65□□□□□ -2.3
Scn5aQ9JJV9 Gm26285-201ENSMUST00000177923 107 ntBASIC0.65□□□□□ -2.3
Scn5aQ9JJV9 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
Scn5aQ9JJV9 Gm36956-201ENSMUST00000193830 214 ntBASIC0.65□□□□□ -2.3
Scn5aQ9JJV9 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.65□□□□□ -2.3
Scn5aQ9JJV9 Gm23622-201ENSMUST00000082460 107 ntBASIC0.65□□□□□ -2.3
Scn5aQ9JJV9 Gm25136-201ENSMUST00000083253 115 ntBASIC0.65□□□□□ -2.3
Scn5aQ9JJV9 Gm23772-201ENSMUST00000104433 102 ntBASIC0.65□□□□□ -2.31
Scn5aQ9JJV9 Gm25599-201ENSMUST00000157816 103 ntBASIC0.65□□□□□ -2.31
Scn5aQ9JJV9 Mir1961-201ENSMUST00000158643 112 ntBASIC0.65□□□□□ -2.31
Scn5aQ9JJV9 Gm22801-201ENSMUST00000175624 84 ntBASIC0.65□□□□□ -2.31
Scn5aQ9JJV9 Gm38274-201ENSMUST00000195689 148 ntBASIC0.65□□□□□ -2.31
Scn5aQ9JJV9 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms