Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Snord71-201ENSMUST00000104361 85 ntBASIC1.18□□□□□ -2.22
Trim54Q9ERP3 Gm22079-201ENSMUST00000157592 106 ntBASIC1.18□□□□□ -2.22
Trim54Q9ERP3 Gm22699-201ENSMUST00000175376 105 ntBASIC1.18□□□□□ -2.22
Trim54Q9ERP3 Mir468-201ENSMUST00000197332 78 ntBASIC1.18□□□□□ -2.22
Trim54Q9ERP3 Gm44948-201ENSMUST00000209050 149 ntBASIC1.18□□□□□ -2.22
Trim54Q9ERP3 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.18□□□□□ -2.22
Trim54Q9ERP3 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.18□□□□□ -2.22
Trim54Q9ERP3 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Trim54Q9ERP3 Gm25611-201ENSMUST00000104017 133 ntBASIC1.17□□□□□ -2.22
Trim54Q9ERP3 Gm23130-201ENSMUST00000104252 74 ntBASIC1.17□□□□□ -2.22
Trim54Q9ERP3 Gm26363-201ENSMUST00000158866 83 ntBASIC1.17□□□□□ -2.22
Trim54Q9ERP3 Mir6381-201ENSMUST00000183426 87 ntBASIC1.17□□□□□ -2.22
Trim54Q9ERP3 Gm24342-201ENSMUST00000103907 104 ntBASIC1.16□□□□□ -2.22
Trim54Q9ERP3 Gm23320-201ENSMUST00000104462 127 ntBASIC1.16□□□□□ -2.22
Trim54Q9ERP3 Gm14502-201ENSMUST00000118154 113 ntBASIC1.16□□□□□ -2.22
Trim54Q9ERP3 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.16□□□□□ -2.22
Trim54Q9ERP3 Gm26089-201ENSMUST00000157898 107 ntBASIC1.16□□□□□ -2.22
Trim54Q9ERP3 Gm22515-201ENSMUST00000158273 305 ntBASIC1.16□□□□□ -2.22
Trim54Q9ERP3 Gm27699-201ENSMUST00000183553 180 ntBASIC1.16□□□□□ -2.22
Trim54Q9ERP3 Gm44338-201ENSMUST00000198614 110 ntBASIC1.16□□□□□ -2.22
Trim54Q9ERP3 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.16□□□□□ -2.22
Trim54Q9ERP3 Gm45268-201ENSMUST00000210046 370 ntBASIC1.16□□□□□ -2.22
Trim54Q9ERP3 Mir709-201ENSMUST00000102190 88 ntBASIC1.15□□□□□ -2.23
Trim54Q9ERP3 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Trim54Q9ERP3 Gm25506-201ENSMUST00000104339 70 ntBASIC1.15□□□□□ -2.23
Trim54Q9ERP3 Mir3969-201ENSMUST00000197106 92 ntBASIC1.15□□□□□ -2.23
Trim54Q9ERP3 Snora41-201ENSMUST00000082668 132 ntBASIC1.15□□□□□ -2.23
Trim54Q9ERP3 Snord61-201ENSMUST00000083176 71 ntBASIC1.15□□□□□ -2.23
Trim54Q9ERP3 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.15□□□□□ -2.23
Trim54Q9ERP3 Mir1904-201ENSMUST00000122702 80 ntBASIC1.14□□□□□ -2.23
Trim54Q9ERP3 Gm23337-201ENSMUST00000158959 118 ntBASIC1.14□□□□□ -2.23
Trim54Q9ERP3 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Trim54Q9ERP3 Gm27419-201ENSMUST00000184576 109 ntBASIC1.14□□□□□ -2.23
Trim54Q9ERP3 Mir6394-201ENSMUST00000184738 99 ntBASIC1.14□□□□□ -2.23
Trim54Q9ERP3 Gm37545-201ENSMUST00000186512 148 ntBASIC1.14□□□□□ -2.23
Trim54Q9ERP3 Gm42506-201ENSMUST00000202009 150 ntBASIC1.14□□□□□ -2.23
Trim54Q9ERP3 Gm8508-201ENSMUST00000061226 363 ntBASIC1.14□□□□□ -2.23
Trim54Q9ERP3 Mir411-201ENSMUST00000083543 82 ntBASIC1.14□□□□□ -2.23
Trim54Q9ERP3 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Trim54Q9ERP3 Gm22373-201ENSMUST00000104584 89 ntBASIC1.13□□□□□ -2.23
Trim54Q9ERP3 Gm23859-201ENSMUST00000158383 64 ntBASIC1.13□□□□□ -2.23
Trim54Q9ERP3 Gm17020-201ENSMUST00000172274 274 ntBASIC1.13□□□□□ -2.23
Trim54Q9ERP3 Mir6928-201ENSMUST00000185166 70 ntBASIC1.13□□□□□ -2.23
Trim54Q9ERP3 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.13□□□□□ -2.23
Trim54Q9ERP3 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.13□□□□□ -2.23
Trim54Q9ERP3 Mir22-201ENSMUST00000083595 95 ntBASIC1.13□□□□□ -2.23
Trim54Q9ERP3 Gm25980-201ENSMUST00000157176 218 ntBASIC1.12□□□□□ -2.23
Trim54Q9ERP3 Gm24401-201ENSMUST00000157868 91 ntBASIC1.12□□□□□ -2.23
Trim54Q9ERP3 Gm24054-201ENSMUST00000158619 105 ntBASIC1.12□□□□□ -2.23
Trim54Q9ERP3 Gm22911-201ENSMUST00000177920 107 ntBASIC1.12□□□□□ -2.23
Trim54Q9ERP3 Mir6377-201ENSMUST00000183760 114 ntBASIC1.12□□□□□ -2.23
Trim54Q9ERP3 Gm43898-201ENSMUST00000204456 424 ntBASIC1.12□□□□□ -2.23
Trim54Q9ERP3 Gm24311-201ENSMUST00000082570 104 ntBASIC1.12□□□□□ -2.23
Trim54Q9ERP3 Gm25136-201ENSMUST00000083253 115 ntBASIC1.12□□□□□ -2.23
Trim54Q9ERP3 Mir344-201ENSMUST00000083634 95 ntBASIC1.12□□□□□ -2.23
Trim54Q9ERP3 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
Trim54Q9ERP3 Gm25496-201ENSMUST00000104430 120 ntBASIC1.11□□□□□ -2.23
Trim54Q9ERP3 Gm24238-201ENSMUST00000157792 98 ntBASIC1.11□□□□□ -2.23
Trim54Q9ERP3 Gm22332-201ENSMUST00000158072 126 ntBASIC1.11□□□□□ -2.23
Trim54Q9ERP3 Gm16550-201ENSMUST00000162550 126 ntBASIC1.11□□□□□ -2.23
Trim54Q9ERP3 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.11□□□□□ -2.23
Trim54Q9ERP3 AC124739.2-201ENSMUST00000222201 109 ntBASIC1.11□□□□□ -2.23
Trim54Q9ERP3 Gm23347-201ENSMUST00000083823 82 ntBASIC1.11□□□□□ -2.23
Trim54Q9ERP3 Gm24509-201ENSMUST00000157086 101 ntBASIC1.1□□□□□ -2.23
Trim54Q9ERP3 Gm25358-201ENSMUST00000157189 101 ntBASIC1.1□□□□□ -2.23
Trim54Q9ERP3 Gm22796-201ENSMUST00000157234 106 ntBASIC1.1□□□□□ -2.23
Trim54Q9ERP3 Gm22565-201ENSMUST00000175540 69 ntBASIC1.1□□□□□ -2.23
Trim54Q9ERP3 Gm18213-201ENSMUST00000207850 178 ntBASIC1.1□□□□□ -2.23
Trim54Q9ERP3 Mir27b-201ENSMUST00000083541 73 ntBASIC1.1□□□□□ -2.23
Trim54Q9ERP3 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.09□□□□□ -2.23
Trim54Q9ERP3 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Trim54Q9ERP3 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Trim54Q9ERP3 Gm22801-201ENSMUST00000175624 84 ntBASIC1.09□□□□□ -2.23
Trim54Q9ERP3 Gm27446-201ENSMUST00000183963 89 ntBASIC1.09□□□□□ -2.23
Trim54Q9ERP3 Mir7091-201ENSMUST00000184075 79 ntBASIC1.09□□□□□ -2.23
Trim54Q9ERP3 Mir6985-201ENSMUST00000184641 61 ntBASIC1.09□□□□□ -2.23
Trim54Q9ERP3 AC150901.1-201ENSMUST00000208407 145 ntBASIC1.09□□□□□ -2.23
Trim54Q9ERP3 Gm23947-201ENSMUST00000093636 107 ntBASIC1.09□□□□□ -2.23
Trim54Q9ERP3 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
Trim54Q9ERP3 Gm24683-201ENSMUST00000104840 88 ntBASIC1.08□□□□□ -2.24
Trim54Q9ERP3 Gm24777-201ENSMUST00000157644 107 ntBASIC1.08□□□□□ -2.24
Trim54Q9ERP3 Gm23763-201ENSMUST00000158345 60 ntBASIC1.08□□□□□ -2.24
Trim54Q9ERP3 Gm27792-201ENSMUST00000184031 115 ntBASIC1.08□□□□□ -2.24
Trim54Q9ERP3 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC1.08□□□□□ -2.24
Trim54Q9ERP3 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.08□□□□□ -2.24
Trim54Q9ERP3 Snord90-201ENSMUST00000104568 111 ntBASIC1.07□□□□□ -2.24
Trim54Q9ERP3 Gm11644-201ENSMUST00000119735 150 ntBASIC1.07□□□□□ -2.24
Trim54Q9ERP3 Gm23838-201ENSMUST00000158067 162 ntBASIC1.07□□□□□ -2.24
Trim54Q9ERP3 Gm42533-201ENSMUST00000196247 157 ntBASIC1.07□□□□□ -2.24
Trim54Q9ERP3 Gm42795-201ENSMUST00000198847 76 ntBASIC1.07□□□□□ -2.24
Trim54Q9ERP3 Gm25610-201ENSMUST00000104016 129 ntBASIC1.06□□□□□ -2.24
Trim54Q9ERP3 Gm24747-201ENSMUST00000157835 87 ntBASIC1.06□□□□□ -2.24
Trim54Q9ERP3 Gm23303-201ENSMUST00000082714 152 ntBASIC1.06□□□□□ -2.24
Trim54Q9ERP3 Gm24616-201ENSMUST00000083274 139 ntBASIC1.06□□□□□ -2.24
Trim54Q9ERP3 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Trim54Q9ERP3 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.05□□□□□ -2.24
Trim54Q9ERP3 Gm25166-201ENSMUST00000158909 111 ntBASIC1.05□□□□□ -2.24
Trim54Q9ERP3 Gm2077-201ENSMUST00000195017 319 ntBASIC1.05□□□□□ -2.24
Trim54Q9ERP3 Gm26018-201ENSMUST00000104406 128 ntBASIC1.04□□□□□ -2.24
Trim54Q9ERP3 Gm44489-201ENSMUST00000104619 97 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 145.6 ms