Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm3702-201ENSMUST00000211754 346 ntBASIC0.32□□□□□ -2.36
Lrif1Q8CDD9 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.32□□□□□ -2.36
Lrif1Q8CDD9 Gm22738-201ENSMUST00000083440 147 ntBASIC0.32□□□□□ -2.36
Lrif1Q8CDD9 Gm22753-201ENSMUST00000083657 107 ntBASIC0.32□□□□□ -2.36
Lrif1Q8CDD9 Gm23347-201ENSMUST00000083823 82 ntBASIC0.32□□□□□ -2.36
Lrif1Q8CDD9 Gm22850-201ENSMUST00000157714 82 ntBASIC0.31□□□□□ -2.36
Lrif1Q8CDD9 Gm23003-201ENSMUST00000179948 107 ntBASIC0.31□□□□□ -2.36
Lrif1Q8CDD9 Gm28767-201ENSMUST00000188601 114 ntBASIC0.31□□□□□ -2.36
Lrif1Q8CDD9 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.31□□□□□ -2.36
Lrif1Q8CDD9 AL606472.1-201ENSMUST00000224628 275 ntBASIC0.31□□□□□ -2.36
Lrif1Q8CDD9 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.31□□□□□ -2.36
Lrif1Q8CDD9 Gm25588-201ENSMUST00000082501 140 ntBASIC0.31□□□□□ -2.36
Lrif1Q8CDD9 Gm23969-201ENSMUST00000083324 74 ntBASIC0.31□□□□□ -2.36
Lrif1Q8CDD9 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Mir669l-201ENSMUST00000103771 98 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm26420-201ENSMUST00000104273 103 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm24555-201ENSMUST00000104548 124 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm24250-201ENSMUST00000157320 135 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm26152-201ENSMUST00000157427 101 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm22557-201ENSMUST00000157804 102 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm22983-201ENSMUST00000158308 104 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm24500-201ENSMUST00000158447 124 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm22431-201ENSMUST00000158545 107 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm25749-201ENSMUST00000175485 111 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm23770-201ENSMUST00000178009 108 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm22832-201ENSMUST00000178022 108 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm23863-201ENSMUST00000178265 108 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm24828-201ENSMUST00000178507 108 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm23052-201ENSMUST00000178633 108 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm25729-201ENSMUST00000179050 108 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm25359-201ENSMUST00000179315 108 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm22624-201ENSMUST00000179913 108 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm24415-201ENSMUST00000180218 107 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm37330-201ENSMUST00000192606 153 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm45541-201ENSMUST00000210443 54 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.3□□□□□ -2.36
Lrif1Q8CDD9 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
Lrif1Q8CDD9 Gm8508-201ENSMUST00000061226 363 ntBASIC0.29□□□□□ -2.36
Lrif1Q8CDD9 Mir200a-201ENSMUST00000083466 90 ntBASIC0.29□□□□□ -2.36
Lrif1Q8CDD9 Mir489-201ENSMUST00000093599 107 ntBASIC0.29□□□□□ -2.36
Lrif1Q8CDD9 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.29□□□□□ -2.36
Lrif1Q8CDD9 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Lrif1Q8CDD9 Gm22706-201ENSMUST00000157907 112 ntBASIC0.28□□□□□ -2.36
Lrif1Q8CDD9 Gm23545-201ENSMUST00000158205 104 ntBASIC0.28□□□□□ -2.36
Lrif1Q8CDD9 Gm24488-201ENSMUST00000179934 127 ntBASIC0.28□□□□□ -2.36
Lrif1Q8CDD9 Gm25701-201ENSMUST00000179988 127 ntBASIC0.28□□□□□ -2.36
Lrif1Q8CDD9 Gm26431-201ENSMUST00000180199 127 ntBASIC0.28□□□□□ -2.36
Lrif1Q8CDD9 Gm27993-201ENSMUST00000184362 85 ntBASIC0.28□□□□□ -2.36
Lrif1Q8CDD9 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.28□□□□□ -2.36
Lrif1Q8CDD9 Gm23140-201ENSMUST00000082487 107 ntBASIC0.28□□□□□ -2.36
Lrif1Q8CDD9 Gm23301-201ENSMUST00000082713 65 ntBASIC0.28□□□□□ -2.36
Lrif1Q8CDD9 Mir411-201ENSMUST00000083543 82 ntBASIC0.28□□□□□ -2.36
Lrif1Q8CDD9 Mir710-201ENSMUST00000102088 110 ntBASIC0.27□□□□□ -2.37
Lrif1Q8CDD9 Mir7077-201ENSMUST00000183991 57 ntBASIC0.27□□□□□ -2.37
Lrif1Q8CDD9 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Lrif1Q8CDD9 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.27□□□□□ -2.37
Lrif1Q8CDD9 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Lrif1Q8CDD9 Gm23378-201ENSMUST00000082942 107 ntBASIC0.27□□□□□ -2.37
Lrif1Q8CDD9 Mir224-201ENSMUST00000083608 82 ntBASIC0.27□□□□□ -2.37
Lrif1Q8CDD9 Mir466p-201ENSMUST00000103925 89 ntBASIC0.26□□□□□ -2.37
Lrif1Q8CDD9 Mir1197-201ENSMUST00000117037 120 ntBASIC0.26□□□□□ -2.37
Lrif1Q8CDD9 Gm24772-201ENSMUST00000158507 110 ntBASIC0.26□□□□□ -2.37
Lrif1Q8CDD9 AC122320.1-201ENSMUST00000227233 105 ntBASIC0.26□□□□□ -2.37
Lrif1Q8CDD9 Gm22790-201ENSMUST00000157229 129 ntBASIC0.25□□□□□ -2.37
Lrif1Q8CDD9 Gm26360-201ENSMUST00000158872 103 ntBASIC0.25□□□□□ -2.37
Lrif1Q8CDD9 Mir100-201ENSMUST00000175270 80 ntBASIC0.25□□□□□ -2.37
Lrif1Q8CDD9 AC154245.1-201ENSMUST00000224615 601 ntBASIC0.25□□□□□ -2.37
Lrif1Q8CDD9 Gm24030-201ENSMUST00000083931 164 ntBASIC0.25□□□□□ -2.37
Lrif1Q8CDD9 Gm23141-201ENSMUST00000178682 94 ntBASIC0.24□□□□□ -2.37
Lrif1Q8CDD9 Gm27475-201ENSMUST00000183420 61 ntBASIC0.24□□□□□ -2.37
Lrif1Q8CDD9 Mir7065-201ENSMUST00000185110 61 ntBASIC0.24□□□□□ -2.37
Lrif1Q8CDD9 Gm37116-201ENSMUST00000195161 147 ntBASIC0.24□□□□□ -2.37
Lrif1Q8CDD9 Gm42795-201ENSMUST00000198847 76 ntBASIC0.24□□□□□ -2.37
Lrif1Q8CDD9 Gm25141-201ENSMUST00000083177 107 ntBASIC0.24□□□□□ -2.37
Lrif1Q8CDD9 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.24□□□□□ -2.37
Lrif1Q8CDD9 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Lrif1Q8CDD9 Gm24238-201ENSMUST00000157792 98 ntBASIC0.23□□□□□ -2.37
Lrif1Q8CDD9 Gm25375-201ENSMUST00000158157 135 ntBASIC0.23□□□□□ -2.37
Lrif1Q8CDD9 Gm25654-201ENSMUST00000158467 88 ntBASIC0.23□□□□□ -2.37
Lrif1Q8CDD9 Gm22239-201ENSMUST00000175220 103 ntBASIC0.23□□□□□ -2.37
Lrif1Q8CDD9 Gm27717-201ENSMUST00000183933 151 ntBASIC0.23□□□□□ -2.37
Lrif1Q8CDD9 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Lrif1Q8CDD9 Gm24208-201ENSMUST00000082783 135 ntBASIC0.23□□□□□ -2.37
Lrif1Q8CDD9 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.23□□□□□ -2.37
Lrif1Q8CDD9 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.22□□□□□ -2.37
Lrif1Q8CDD9 Gm22951-201ENSMUST00000179471 107 ntBASIC0.22□□□□□ -2.37
Lrif1Q8CDD9 Mir6369-201ENSMUST00000183772 106 ntBASIC0.22□□□□□ -2.37
Lrif1Q8CDD9 Gm44807-201ENSMUST00000206115 154 ntBASIC0.22□□□□□ -2.37
Lrif1Q8CDD9 Snord60-201ENSMUST00000082834 78 ntBASIC0.22□□□□□ -2.37
Lrif1Q8CDD9 Gm10172-201ENSMUST00000085929 558 ntBASIC0.22□□□□□ -2.37
Lrif1Q8CDD9 Gm25610-201ENSMUST00000104016 129 ntBASIC0.21□□□□□ -2.38
Lrif1Q8CDD9 Scarna9-201ENSMUST00000104318 70 ntBASIC0.21□□□□□ -2.38
Lrif1Q8CDD9 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.21□□□□□ -2.38
Lrif1Q8CDD9 Mir1899-201ENSMUST00000122798 96 ntBASIC0.21□□□□□ -2.38
Lrif1Q8CDD9 Gm15654-201ENSMUST00000152660 300 ntBASIC0.21□□□□□ -2.38
Lrif1Q8CDD9 Gm22332-201ENSMUST00000158072 126 ntBASIC0.21□□□□□ -2.38
Lrif1Q8CDD9 Gm44909-201ENSMUST00000208756 165 ntBASIC0.21□□□□□ -2.38
Lrif1Q8CDD9 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.21□□□□□ -2.38
Lrif1Q8CDD9 Snord82-201ENSMUST00000082889 70 ntBASIC0.21□□□□□ -2.38
Lrif1Q8CDD9 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 229.6 ms