Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC2.28□□□□□ -2.04
Trim56Q80VI1 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
Trim56Q80VI1 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trim56Q80VI1 Gm16265-201ENSMUST00000134558 108 ntBASIC2.27□□□□□ -2.05
Trim56Q80VI1 Mir3083-201ENSMUST00000175377 64 ntBASIC2.27□□□□□ -2.05
Trim56Q80VI1 Mir7026-201ENSMUST00000184384 67 ntBASIC2.27□□□□□ -2.05
Trim56Q80VI1 Gm44807-201ENSMUST00000206115 154 ntBASIC2.27□□□□□ -2.05
Trim56Q80VI1 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trim56Q80VI1 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Trim56Q80VI1 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Trim56Q80VI1 Gm23766-201ENSMUST00000103894 80 ntBASIC2.26□□□□□ -2.05
Trim56Q80VI1 Gm23109-201ENSMUST00000116867 126 ntBASIC2.26□□□□□ -2.05
Trim56Q80VI1 Gm23048-201ENSMUST00000157237 129 ntBASIC2.26□□□□□ -2.05
Trim56Q80VI1 Gm25011-201ENSMUST00000158398 126 ntBASIC2.26□□□□□ -2.05
Trim56Q80VI1 Mir669n-201ENSMUST00000158636 54 ntBASIC2.26□□□□□ -2.05
Trim56Q80VI1 Gm24880-201ENSMUST00000158776 85 ntBASIC2.26□□□□□ -2.05
Trim56Q80VI1 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC2.26□□□□□ -2.05
Trim56Q80VI1 Gm20391-201ENSMUST00000174722 106 ntBASIC2.26□□□□□ -2.05
Trim56Q80VI1 Gm24366-201ENSMUST00000175383 86 ntBASIC2.26□□□□□ -2.05
Trim56Q80VI1 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.26□□□□□ -2.05
Trim56Q80VI1 Gm16550-201ENSMUST00000162550 126 ntBASIC2.25□□□□□ -2.05
Trim56Q80VI1 Snord87-201ENSMUST00000175437 87 ntBASIC2.25□□□□□ -2.05
Trim56Q80VI1 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.25□□□□□ -2.05
Trim56Q80VI1 Gm22950-201ENSMUST00000082776 107 ntBASIC2.25□□□□□ -2.05
Trim56Q80VI1 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.25□□□□□ -2.05
Trim56Q80VI1 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trim56Q80VI1 Gm11248-201ENSMUST00000119568 201 ntBASIC2.24□□□□□ -2.05
Trim56Q80VI1 Gm22319-201ENSMUST00000157147 122 ntBASIC2.24□□□□□ -2.05
Trim56Q80VI1 Gm23601-201ENSMUST00000157259 131 ntBASIC2.24□□□□□ -2.05
Trim56Q80VI1 Gm22803-201ENSMUST00000158049 283 ntBASIC2.24□□□□□ -2.05
Trim56Q80VI1 Gm25368-201ENSMUST00000158847 131 ntBASIC2.24□□□□□ -2.05
Trim56Q80VI1 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trim56Q80VI1 Mir758-201ENSMUST00000103260 81 ntBASIC2.23□□□□□ -2.05
Trim56Q80VI1 Mir654-201ENSMUST00000104787 84 ntBASIC2.23□□□□□ -2.05
Trim56Q80VI1 Gm23986-201ENSMUST00000157144 63 ntBASIC2.23□□□□□ -2.05
Trim56Q80VI1 Gm22551-201ENSMUST00000157795 103 ntBASIC2.23□□□□□ -2.05
Trim56Q80VI1 Gm22963-201ENSMUST00000157960 91 ntBASIC2.23□□□□□ -2.05
Trim56Q80VI1 Gm22425-201ENSMUST00000158532 138 ntBASIC2.23□□□□□ -2.05
Trim56Q80VI1 Gm25838-201ENSMUST00000158920 120 ntBASIC2.23□□□□□ -2.05
Trim56Q80VI1 Gm16539-201ENSMUST00000160086 327 ntBASIC2.23□□□□□ -2.05
Trim56Q80VI1 Gm27544-201ENSMUST00000185069 155 ntBASIC2.23□□□□□ -2.05
Trim56Q80VI1 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Trim56Q80VI1 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Trim56Q80VI1 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.22□□□□□ -2.05
Trim56Q80VI1 Gm23670-201ENSMUST00000157469 119 ntBASIC2.22□□□□□ -2.05
Trim56Q80VI1 Gm23384-201ENSMUST00000158593 103 ntBASIC2.22□□□□□ -2.05
Trim56Q80VI1 Gm25044-201ENSMUST00000158603 104 ntBASIC2.22□□□□□ -2.05
Trim56Q80VI1 Mir6406-201ENSMUST00000183592 120 ntBASIC2.22□□□□□ -2.05
Trim56Q80VI1 Gm24099-201ENSMUST00000083384 107 ntBASIC2.22□□□□□ -2.05
Trim56Q80VI1 Mir221-201ENSMUST00000083488 95 ntBASIC2.22□□□□□ -2.05
Trim56Q80VI1 Gm25289-201ENSMUST00000122799 119 ntBASIC2.21□□□□□ -2.06
Trim56Q80VI1 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.21□□□□□ -2.06
Trim56Q80VI1 Gm27722-201ENSMUST00000183908 76 ntBASIC2.21□□□□□ -2.06
Trim56Q80VI1 Gm24524-201ENSMUST00000082925 170 ntBASIC2.21□□□□□ -2.06
Trim56Q80VI1 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Trim56Q80VI1 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trim56Q80VI1 Mir7679-201ENSMUST00000183379 63 ntBASIC2.2□□□□□ -2.06
Trim56Q80VI1 Mir7017-201ENSMUST00000184894 62 ntBASIC2.2□□□□□ -2.06
Trim56Q80VI1 Gm43512-201ENSMUST00000198495 176 ntBASIC2.2□□□□□ -2.06
Trim56Q80VI1 Gm25820-201ENSMUST00000198589 127 ntBASIC2.2□□□□□ -2.06
Trim56Q80VI1 Gm44462-201ENSMUST00000199696 129 ntBASIC2.2□□□□□ -2.06
Trim56Q80VI1 Gm42935-201ENSMUST00000202004 151 ntBASIC2.2□□□□□ -2.06
Trim56Q80VI1 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Trim56Q80VI1 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.19□□□□□ -2.06
Trim56Q80VI1 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.19□□□□□ -2.06
Trim56Q80VI1 Snora24-201ENSMUST00000174989 130 ntBASIC2.19□□□□□ -2.06
Trim56Q80VI1 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.19□□□□□ -2.06
Trim56Q80VI1 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trim56Q80VI1 Gm14400-201ENSMUST00000117234 2135 ntBASIC2.18□□□□□ -2.06
Trim56Q80VI1 Gm25680-201ENSMUST00000116917 126 ntBASIC2.18□□□□□ -2.06
Trim56Q80VI1 Gm22635-201ENSMUST00000116962 126 ntBASIC2.18□□□□□ -2.06
Trim56Q80VI1 Gm25329-201ENSMUST00000158041 126 ntBASIC2.18□□□□□ -2.06
Trim56Q80VI1 Gm22200-201ENSMUST00000158614 67 ntBASIC2.18□□□□□ -2.06
Trim56Q80VI1 Mir3057-201ENSMUST00000175040 91 ntBASIC2.18□□□□□ -2.06
Trim56Q80VI1 Gm25730-201ENSMUST00000178753 165 ntBASIC2.18□□□□□ -2.06
Trim56Q80VI1 Gm27517-201ENSMUST00000184347 236 ntBASIC2.18□□□□□ -2.06
Trim56Q80VI1 Mir21c-201ENSMUST00000184910 78 ntBASIC2.18□□□□□ -2.06
Trim56Q80VI1 Gm25402-201ENSMUST00000082966 131 ntBASIC2.18□□□□□ -2.06
Trim56Q80VI1 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trim56Q80VI1 Gm23469-201ENSMUST00000157131 104 ntBASIC2.17□□□□□ -2.06
Trim56Q80VI1 Mir5104-201ENSMUST00000175319 94 ntBASIC2.17□□□□□ -2.06
Trim56Q80VI1 Gm26466-201ENSMUST00000179615 79 ntBASIC2.17□□□□□ -2.06
Trim56Q80VI1 Gm24177-201ENSMUST00000158927 131 ntBASIC2.16□□□□□ -2.06
Trim56Q80VI1 Mir3061-201ENSMUST00000175129 91 ntBASIC2.16□□□□□ -2.06
Trim56Q80VI1 Gm21885-201ENSMUST00000178891 327 ntBASIC2.16□□□□□ -2.06
Trim56Q80VI1 Mir8116-201ENSMUST00000184134 97 ntBASIC2.16□□□□□ -2.06
Trim56Q80VI1 Mir7678-201ENSMUST00000185076 71 ntBASIC2.16□□□□□ -2.06
Trim56Q80VI1 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.16□□□□□ -2.06
Trim56Q80VI1 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.16□□□□□ -2.06
Trim56Q80VI1 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trim56Q80VI1 Gm15654-201ENSMUST00000152660 300 ntBASIC2.15□□□□□ -2.07
Trim56Q80VI1 Gm26104-201ENSMUST00000157250 108 ntBASIC2.15□□□□□ -2.07
Trim56Q80VI1 Gm43977-201ENSMUST00000203970 189 ntBASIC2.15□□□□□ -2.07
Trim56Q80VI1 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.15□□□□□ -2.07
Trim56Q80VI1 Gm25636-201ENSMUST00000082666 133 ntBASIC2.15□□□□□ -2.07
Trim56Q80VI1 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.14□□□□□ -2.07
Trim56Q80VI1 Gm26253-201ENSMUST00000122493 103 ntBASIC2.14□□□□□ -2.07
Trim56Q80VI1 Gm24907-201ENSMUST00000116932 128 ntBASIC2.13□□□□□ -2.07
Trim56Q80VI1 Gm25976-201ENSMUST00000158695 130 ntBASIC2.13□□□□□ -2.07
Trim56Q80VI1 CT571266.1-201ENSMUST00000222859 153 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 213.4 ms