Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm25920-201ENSMUST00000158307 99 ntBASIC1.4□□□□□ -2.19
Rnf220Q6PDX6 Gm23966-201ENSMUST00000179823 107 ntBASIC1.4□□□□□ -2.19
Rnf220Q6PDX6 Mir6352-201ENSMUST00000184495 116 ntBASIC1.4□□□□□ -2.19
Rnf220Q6PDX6 Mir7657-201ENSMUST00000196051 57 ntBASIC1.4□□□□□ -2.19
Rnf220Q6PDX6 Mir532-201ENSMUST00000093630 96 ntBASIC1.4□□□□□ -2.19
Rnf220Q6PDX6 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.39□□□□□ -2.19
Rnf220Q6PDX6 Gm23011-201ENSMUST00000104148 132 ntBASIC1.39□□□□□ -2.19
Rnf220Q6PDX6 Gm22665-201ENSMUST00000158720 275 ntBASIC1.39□□□□□ -2.19
Rnf220Q6PDX6 Gm22887-201ENSMUST00000178586 107 ntBASIC1.39□□□□□ -2.19
Rnf220Q6PDX6 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.39□□□□□ -2.19
Rnf220Q6PDX6 Gm26922-201ENSMUST00000082687 72 ntBASIC1.39□□□□□ -2.19
Rnf220Q6PDX6 Gm23130-201ENSMUST00000104252 74 ntBASIC1.38□□□□□ -2.19
Rnf220Q6PDX6 Gm15115-201ENSMUST00000121145 264 ntBASIC1.38□□□□□ -2.19
Rnf220Q6PDX6 Gm15654-201ENSMUST00000152660 300 ntBASIC1.38□□□□□ -2.19
Rnf220Q6PDX6 Gm23670-201ENSMUST00000157469 119 ntBASIC1.38□□□□□ -2.19
Rnf220Q6PDX6 Gm25836-201ENSMUST00000158918 123 ntBASIC1.38□□□□□ -2.19
Rnf220Q6PDX6 Gm22862-201ENSMUST00000178593 121 ntBASIC1.38□□□□□ -2.19
Rnf220Q6PDX6 Gm7258-201ENSMUST00000179317 300 ntBASIC1.38□□□□□ -2.19
Rnf220Q6PDX6 Mir3569-201ENSMUST00000185080 58 ntBASIC1.38□□□□□ -2.19
Rnf220Q6PDX6 Gm25851-201ENSMUST00000082794 107 ntBASIC1.38□□□□□ -2.19
Rnf220Q6PDX6 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Rnf220Q6PDX6 Mir709-201ENSMUST00000102190 88 ntBASIC1.37□□□□□ -2.19
Rnf220Q6PDX6 Gm27493-201ENSMUST00000184128 78 ntBASIC1.37□□□□□ -2.19
Rnf220Q6PDX6 Gm38298-201ENSMUST00000193578 118 ntBASIC1.37□□□□□ -2.19
Rnf220Q6PDX6 Gm43512-201ENSMUST00000198495 176 ntBASIC1.37□□□□□ -2.19
Rnf220Q6PDX6 Gm44408-201ENSMUST00000200205 66 ntBASIC1.37□□□□□ -2.19
Rnf220Q6PDX6 Gm25128-201ENSMUST00000083339 76 ntBASIC1.37□□□□□ -2.19
Rnf220Q6PDX6 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.37□□□□□ -2.19
Rnf220Q6PDX6 Gm22451-201ENSMUST00000122803 151 ntBASIC1.36□□□□□ -2.19
Rnf220Q6PDX6 Gm20118-201ENSMUST00000187207 162 ntBASIC1.36□□□□□ -2.19
Rnf220Q6PDX6 Gm23245-201ENSMUST00000083370 135 ntBASIC1.36□□□□□ -2.19
Rnf220Q6PDX6 Mir148b-201ENSMUST00000083626 97 ntBASIC1.36□□□□□ -2.19
Rnf220Q6PDX6 Gm22723-201ENSMUST00000083820 129 ntBASIC1.36□□□□□ -2.19
Rnf220Q6PDX6 Gm24271-201ENSMUST00000102327 111 ntBASIC1.35□□□□□ -2.19
Rnf220Q6PDX6 Gm23010-201ENSMUST00000104151 126 ntBASIC1.35□□□□□ -2.19
Rnf220Q6PDX6 Gm14039-201ENSMUST00000118705 101 ntBASIC1.35□□□□□ -2.19
Rnf220Q6PDX6 Gm25623-201ENSMUST00000157216 108 ntBASIC1.35□□□□□ -2.19
Rnf220Q6PDX6 Gm22129-201ENSMUST00000179034 107 ntBASIC1.35□□□□□ -2.19
Rnf220Q6PDX6 Mir7026-201ENSMUST00000184384 67 ntBASIC1.35□□□□□ -2.19
Rnf220Q6PDX6 mt-Tt-201ENSMUST00000082422 67 ntBASIC1.35□□□□□ -2.19
Rnf220Q6PDX6 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC1.35□□□□□ -2.19
Rnf220Q6PDX6 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Rnf220Q6PDX6 Gm25091-201ENSMUST00000103997 71 ntBASIC1.34□□□□□ -2.19
Rnf220Q6PDX6 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.34□□□□□ -2.19
Rnf220Q6PDX6 Gm22663-201ENSMUST00000158721 102 ntBASIC1.34□□□□□ -2.19
Rnf220Q6PDX6 Gm22801-201ENSMUST00000175624 84 ntBASIC1.34□□□□□ -2.19
Rnf220Q6PDX6 Mir6369-201ENSMUST00000183772 106 ntBASIC1.34□□□□□ -2.19
Rnf220Q6PDX6 Gm18433-201ENSMUST00000192747 197 ntBASIC1.34□□□□□ -2.19
Rnf220Q6PDX6 Mir30f-201ENSMUST00000196073 92 ntBASIC1.34□□□□□ -2.19
Rnf220Q6PDX6 Gm45654-201ENSMUST00000210980 123 ntBASIC1.34□□□□□ -2.19
Rnf220Q6PDX6 Gm24616-201ENSMUST00000083274 139 ntBASIC1.34□□□□□ -2.19
Rnf220Q6PDX6 Gm22761-201ENSMUST00000102278 96 ntBASIC1.33□□□□□ -2.2
Rnf220Q6PDX6 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.33□□□□□ -2.2
Rnf220Q6PDX6 Gm22559-201ENSMUST00000157329 134 ntBASIC1.33□□□□□ -2.2
Rnf220Q6PDX6 Gm25329-201ENSMUST00000158041 126 ntBASIC1.33□□□□□ -2.2
Rnf220Q6PDX6 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.33□□□□□ -2.2
Rnf220Q6PDX6 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.33□□□□□ -2.2
Rnf220Q6PDX6 Gm23048-201ENSMUST00000157237 129 ntBASIC1.32□□□□□ -2.2
Rnf220Q6PDX6 AC136457.1-201ENSMUST00000224195 156 ntBASIC1.32□□□□□ -2.2
Rnf220Q6PDX6 Gm23377-201ENSMUST00000082943 126 ntBASIC1.32□□□□□ -2.2
Rnf220Q6PDX6 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Rnf220Q6PDX6 Gm26358-201ENSMUST00000158215 97 ntBASIC1.31□□□□□ -2.2
Rnf220Q6PDX6 Gm22515-201ENSMUST00000158273 305 ntBASIC1.31□□□□□ -2.2
Rnf220Q6PDX6 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.31□□□□□ -2.2
Rnf220Q6PDX6 Mir7009-201ENSMUST00000184519 64 ntBASIC1.31□□□□□ -2.2
Rnf220Q6PDX6 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Rnf220Q6PDX6 Mir20b-201ENSMUST00000102087 80 ntBASIC1.3□□□□□ -2.2
Rnf220Q6PDX6 Snord64-201ENSMUST00000104003 67 ntBASIC1.3□□□□□ -2.2
Rnf220Q6PDX6 Gm24728-201ENSMUST00000158226 125 ntBASIC1.3□□□□□ -2.2
Rnf220Q6PDX6 Gm22944-201ENSMUST00000158662 133 ntBASIC1.3□□□□□ -2.2
Rnf220Q6PDX6 Gm24842-201ENSMUST00000158681 54 ntBASIC1.3□□□□□ -2.2
Rnf220Q6PDX6 Gm24575-201ENSMUST00000175502 77 ntBASIC1.3□□□□□ -2.2
Rnf220Q6PDX6 Gm27711-201ENSMUST00000183802 118 ntBASIC1.3□□□□□ -2.2
Rnf220Q6PDX6 Gm28767-201ENSMUST00000188601 114 ntBASIC1.3□□□□□ -2.2
Rnf220Q6PDX6 Gm44385-201ENSMUST00000198781 81 ntBASIC1.3□□□□□ -2.2
Rnf220Q6PDX6 Gm42935-201ENSMUST00000202004 151 ntBASIC1.3□□□□□ -2.2
Rnf220Q6PDX6 AC147101.2-201ENSMUST00000219756 184 ntBASIC1.3□□□□□ -2.2
Rnf220Q6PDX6 Gm24311-201ENSMUST00000082570 104 ntBASIC1.3□□□□□ -2.2
Rnf220Q6PDX6 Gm25812-201ENSMUST00000082751 103 ntBASIC1.3□□□□□ -2.2
Rnf220Q6PDX6 Gm26168-201ENSMUST00000083787 112 ntBASIC1.3□□□□□ -2.2
Rnf220Q6PDX6 Gm24865-201ENSMUST00000103246 96 ntBASIC1.29□□□□□ -2.2
Rnf220Q6PDX6 Scarna9-201ENSMUST00000104318 70 ntBASIC1.29□□□□□ -2.2
Rnf220Q6PDX6 Gm23044-201ENSMUST00000157891 100 ntBASIC1.29□□□□□ -2.2
Rnf220Q6PDX6 Gm22074-201ENSMUST00000158595 113 ntBASIC1.29□□□□□ -2.2
Rnf220Q6PDX6 Gm24221-201ENSMUST00000158833 313 ntBASIC1.29□□□□□ -2.2
Rnf220Q6PDX6 Gm22708-201ENSMUST00000158987 103 ntBASIC1.29□□□□□ -2.2
Rnf220Q6PDX6 Gm23289-201ENSMUST00000175615 108 ntBASIC1.29□□□□□ -2.2
Rnf220Q6PDX6 Gm37579-201ENSMUST00000194291 142 ntBASIC1.29□□□□□ -2.2
Rnf220Q6PDX6 Gm23138-201ENSMUST00000083365 103 ntBASIC1.29□□□□□ -2.2
Rnf220Q6PDX6 Gm24030-201ENSMUST00000083931 164 ntBASIC1.29□□□□□ -2.2
Rnf220Q6PDX6 Gm24394-201ENSMUST00000158141 123 ntBASIC1.28□□□□□ -2.2
Rnf220Q6PDX6 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.28□□□□□ -2.2
Rnf220Q6PDX6 Mir320-201ENSMUST00000083594 82 ntBASIC1.28□□□□□ -2.2
Rnf220Q6PDX6 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Rnf220Q6PDX6 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.27□□□□□ -2.21
Rnf220Q6PDX6 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.27□□□□□ -2.21
Rnf220Q6PDX6 Snora41-201ENSMUST00000082668 132 ntBASIC1.27□□□□□ -2.21
Rnf220Q6PDX6 Gm25006-201ENSMUST00000083813 107 ntBASIC1.27□□□□□ -2.21
Rnf220Q6PDX6 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.27□□□□□ -2.21
Rnf220Q6PDX6 Gm24913-201ENSMUST00000157286 107 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 239.5 ms