Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm22743-201ENSMUST00000083445 133 ntBASIC2.39□□□□□ -2.03
Rnf43Q5NCP0 Mir490-201ENSMUST00000093567 84 ntBASIC2.39□□□□□ -2.03
Rnf43Q5NCP0 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
Rnf43Q5NCP0 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Rnf43Q5NCP0 Gm23950-201ENSMUST00000104026 129 ntBASIC2.38□□□□□ -2.03
Rnf43Q5NCP0 Gm22999-201ENSMUST00000157082 88 ntBASIC2.38□□□□□ -2.03
Rnf43Q5NCP0 Gm25950-201ENSMUST00000175331 100 ntBASIC2.38□□□□□ -2.03
Rnf43Q5NCP0 Mir497-201ENSMUST00000200557 84 ntBASIC2.38□□□□□ -2.03
Rnf43Q5NCP0 Gm22866-201ENSMUST00000083947 177 ntBASIC2.38□□□□□ -2.03
Rnf43Q5NCP0 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Rnf43Q5NCP0 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.37□□□□□ -2.03
Rnf43Q5NCP0 Gm22803-201ENSMUST00000158049 283 ntBASIC2.37□□□□□ -2.03
Rnf43Q5NCP0 Gm22605-201ENSMUST00000158289 108 ntBASIC2.37□□□□□ -2.03
Rnf43Q5NCP0 Mir6237-201ENSMUST00000183808 91 ntBASIC2.37□□□□□ -2.03
Rnf43Q5NCP0 Gm43722-201ENSMUST00000196054 124 ntBASIC2.37□□□□□ -2.03
Rnf43Q5NCP0 Gm45471-201ENSMUST00000211270 281 ntBASIC2.37□□□□□ -2.03
Rnf43Q5NCP0 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC2.37□□□□□ -2.03
Rnf43Q5NCP0 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Rnf43Q5NCP0 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Rnf43Q5NCP0 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Rnf43Q5NCP0 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.36□□□□□ -2.03
Rnf43Q5NCP0 Gm25061-201ENSMUST00000104665 107 ntBASIC2.36□□□□□ -2.03
Rnf43Q5NCP0 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.36□□□□□ -2.03
Rnf43Q5NCP0 Gm22888-201ENSMUST00000158640 77 ntBASIC2.36□□□□□ -2.03
Rnf43Q5NCP0 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.36□□□□□ -2.03
Rnf43Q5NCP0 Gm24656-201ENSMUST00000177548 132 ntBASIC2.36□□□□□ -2.03
Rnf43Q5NCP0 Mir6997-201ENSMUST00000184313 71 ntBASIC2.36□□□□□ -2.03
Rnf43Q5NCP0 Mir7026-201ENSMUST00000184384 67 ntBASIC2.36□□□□□ -2.03
Rnf43Q5NCP0 Mir151-201ENSMUST00000083678 68 ntBASIC2.36□□□□□ -2.03
Rnf43Q5NCP0 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Rnf43Q5NCP0 Mir880-201ENSMUST00000104809 78 ntBASIC2.35□□□□□ -2.03
Rnf43Q5NCP0 Gm23033-201ENSMUST00000157996 134 ntBASIC2.35□□□□□ -2.03
Rnf43Q5NCP0 Gm22947-201ENSMUST00000158559 91 ntBASIC2.35□□□□□ -2.03
Rnf43Q5NCP0 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.35□□□□□ -2.03
Rnf43Q5NCP0 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.35□□□□□ -2.03
Rnf43Q5NCP0 Gm20108-201ENSMUST00000219977 153 ntBASIC2.35□□□□□ -2.03
Rnf43Q5NCP0 Mir93-201ENSMUST00000083593 88 ntBASIC2.35□□□□□ -2.03
Rnf43Q5NCP0 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Rnf43Q5NCP0 Gm26004-201ENSMUST00000158804 116 ntBASIC2.34□□□□□ -2.03
Rnf43Q5NCP0 Mir3069-201ENSMUST00000198802 65 ntBASIC2.34□□□□□ -2.03
Rnf43Q5NCP0 Gm44807-201ENSMUST00000206115 154 ntBASIC2.34□□□□□ -2.03
Rnf43Q5NCP0 Gm3702-201ENSMUST00000211754 346 ntBASIC2.34□□□□□ -2.03
Rnf43Q5NCP0 Gm8031-201ENSMUST00000213430 626 ntBASIC2.34□□□□□ -2.03
Rnf43Q5NCP0 Mir1a-1-201ENSMUST00000093635 77 ntBASIC2.34□□□□□ -2.03
Rnf43Q5NCP0 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
Rnf43Q5NCP0 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.33□□□□□ -2.04
Rnf43Q5NCP0 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Rnf43Q5NCP0 Gm26090-201ENSMUST00000157897 128 ntBASIC2.33□□□□□ -2.04
Rnf43Q5NCP0 Gm22089-201ENSMUST00000158336 102 ntBASIC2.33□□□□□ -2.04
Rnf43Q5NCP0 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.33□□□□□ -2.04
Rnf43Q5NCP0 Snora3-201ENSMUST00000083082 132 ntBASIC2.33□□□□□ -2.04
Rnf43Q5NCP0 Mir423-201ENSMUST00000083584 109 ntBASIC2.33□□□□□ -2.04
Rnf43Q5NCP0 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.33□□□□□ -2.04
Rnf43Q5NCP0 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Rnf43Q5NCP0 Gm11248-201ENSMUST00000119568 201 ntBASIC2.32□□□□□ -2.04
Rnf43Q5NCP0 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.32□□□□□ -2.04
Rnf43Q5NCP0 Mir1949-201ENSMUST00000157434 141 ntBASIC2.32□□□□□ -2.04
Rnf43Q5NCP0 Gm26369-201ENSMUST00000157825 100 ntBASIC2.32□□□□□ -2.04
Rnf43Q5NCP0 Gm25229-201ENSMUST00000178587 79 ntBASIC2.32□□□□□ -2.04
Rnf43Q5NCP0 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.31□□□□□ -2.04
Rnf43Q5NCP0 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Rnf43Q5NCP0 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.31□□□□□ -2.04
Rnf43Q5NCP0 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Rnf43Q5NCP0 Gm23670-201ENSMUST00000157469 119 ntBASIC2.31□□□□□ -2.04
Rnf43Q5NCP0 Gm23761-201ENSMUST00000158347 104 ntBASIC2.31□□□□□ -2.04
Rnf43Q5NCP0 Gm24177-201ENSMUST00000158927 131 ntBASIC2.31□□□□□ -2.04
Rnf43Q5NCP0 Mir7232-201ENSMUST00000197929 74 ntBASIC2.31□□□□□ -2.04
Rnf43Q5NCP0 Snord104-201ENSMUST00000083192 70 ntBASIC2.31□□□□□ -2.04
Rnf43Q5NCP0 Mir451a-201ENSMUST00000093557 72 ntBASIC2.31□□□□□ -2.04
Rnf43Q5NCP0 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Rnf43Q5NCP0 Gm26080-201ENSMUST00000104069 131 ntBASIC2.3□□□□□ -2.04
Rnf43Q5NCP0 Gm16561-201ENSMUST00000163001 192 ntBASIC2.3□□□□□ -2.04
Rnf43Q5NCP0 mt-Tc-201ENSMUST00000082400 66 ntBASIC2.3□□□□□ -2.04
Rnf43Q5NCP0 Gm22458-201ENSMUST00000082576 107 ntBASIC2.3□□□□□ -2.04
Rnf43Q5NCP0 Gm23377-201ENSMUST00000082943 126 ntBASIC2.3□□□□□ -2.04
Rnf43Q5NCP0 Mir30c-2-201ENSMUST00000083633 84 ntBASIC2.3□□□□□ -2.04
Rnf43Q5NCP0 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC2.3□□□□□ -2.04
Rnf43Q5NCP0 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.3□□□□□ -2.04
Rnf43Q5NCP0 Gm11856-201ENSMUST00000118712 276 ntBASIC2.29□□□□□ -2.04
Rnf43Q5NCP0 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.29□□□□□ -2.04
Rnf43Q5NCP0 Gm25113-201ENSMUST00000157185 143 ntBASIC2.29□□□□□ -2.04
Rnf43Q5NCP0 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.29□□□□□ -2.04
Rnf43Q5NCP0 Gm25994-201ENSMUST00000175392 101 ntBASIC2.29□□□□□ -2.04
Rnf43Q5NCP0 Gm27639-201ENSMUST00000184937 85 ntBASIC2.29□□□□□ -2.04
Rnf43Q5NCP0 Gm42935-201ENSMUST00000202004 151 ntBASIC2.29□□□□□ -2.04
Rnf43Q5NCP0 Mir222-201ENSMUST00000083537 79 ntBASIC2.29□□□□□ -2.04
Rnf43Q5NCP0 Mir107-201ENSMUST00000083660 87 ntBASIC2.29□□□□□ -2.04
Rnf43Q5NCP0 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Rnf43Q5NCP0 Gm22677-201ENSMUST00000116977 108 ntBASIC2.28□□□□□ -2.04
Rnf43Q5NCP0 Gm23996-201ENSMUST00000158062 131 ntBASIC2.28□□□□□ -2.04
Rnf43Q5NCP0 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.28□□□□□ -2.04
Rnf43Q5NCP0 Mir7683-201ENSMUST00000183842 61 ntBASIC2.28□□□□□ -2.04
Rnf43Q5NCP0 Mir7017-201ENSMUST00000184894 62 ntBASIC2.28□□□□□ -2.04
Rnf43Q5NCP0 Gm37579-201ENSMUST00000194291 142 ntBASIC2.28□□□□□ -2.04
Rnf43Q5NCP0 AC159093.2-201ENSMUST00000227881 297 ntBASIC2.28□□□□□ -2.04
Rnf43Q5NCP0 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.28□□□□□ -2.04
Rnf43Q5NCP0 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
Rnf43Q5NCP0 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.27□□□□□ -2.05
Rnf43Q5NCP0 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
Rnf43Q5NCP0 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 145.2 ms