Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm25460-201ENSMUST00000157954 127 ntBASIC2.42□□□□□ -2.02
Limch1Q3UH68 Snord50a-201ENSMUST00000178154 72 ntBASIC2.42□□□□□ -2.02
Limch1Q3UH68 Gm24463-201ENSMUST00000178417 72 ntBASIC2.42□□□□□ -2.02
Limch1Q3UH68 Mir6379-201ENSMUST00000183392 115 ntBASIC2.42□□□□□ -2.02
Limch1Q3UH68 Mir93-201ENSMUST00000083593 88 ntBASIC2.42□□□□□ -2.02
Limch1Q3UH68 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.42□□□□□ -2.02
Limch1Q3UH68 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Limch1Q3UH68 Gm24044-201ENSMUST00000083107 156 ntBASIC2.41□□□□□ -2.02
Limch1Q3UH68 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Limch1Q3UH68 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Limch1Q3UH68 Gm23010-201ENSMUST00000104151 126 ntBASIC2.4□□□□□ -2.03
Limch1Q3UH68 Gm11248-201ENSMUST00000119568 201 ntBASIC2.4□□□□□ -2.03
Limch1Q3UH68 Mir1949-201ENSMUST00000157434 141 ntBASIC2.4□□□□□ -2.03
Limch1Q3UH68 Gm23342-201ENSMUST00000158958 115 ntBASIC2.4□□□□□ -2.03
Limch1Q3UH68 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.4□□□□□ -2.03
Limch1Q3UH68 Gm20391-201ENSMUST00000174722 106 ntBASIC2.4□□□□□ -2.03
Limch1Q3UH68 Mir7683-201ENSMUST00000183842 61 ntBASIC2.4□□□□□ -2.03
Limch1Q3UH68 Mir7016-201ENSMUST00000184308 72 ntBASIC2.4□□□□□ -2.03
Limch1Q3UH68 Gm29535-201ENSMUST00000185723 109 ntBASIC2.4□□□□□ -2.03
Limch1Q3UH68 Gm28143-201ENSMUST00000191082 109 ntBASIC2.4□□□□□ -2.03
Limch1Q3UH68 Gm37579-201ENSMUST00000194291 142 ntBASIC2.4□□□□□ -2.03
Limch1Q3UH68 Gm23377-201ENSMUST00000082943 126 ntBASIC2.4□□□□□ -2.03
Limch1Q3UH68 Gm24523-201ENSMUST00000083965 132 ntBASIC2.4□□□□□ -2.03
Limch1Q3UH68 Gm24098-201ENSMUST00000102075 109 ntBASIC2.39□□□□□ -2.03
Limch1Q3UH68 Gm25381-201ENSMUST00000102078 109 ntBASIC2.39□□□□□ -2.03
Limch1Q3UH68 Mir758-201ENSMUST00000103260 81 ntBASIC2.39□□□□□ -2.03
Limch1Q3UH68 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.39□□□□□ -2.03
Limch1Q3UH68 Gm25994-201ENSMUST00000175392 101 ntBASIC2.39□□□□□ -2.03
Limch1Q3UH68 Gm23375-201ENSMUST00000175407 83 ntBASIC2.39□□□□□ -2.03
Limch1Q3UH68 Gm43977-201ENSMUST00000203970 189 ntBASIC2.39□□□□□ -2.03
Limch1Q3UH68 Gm22866-201ENSMUST00000083947 177 ntBASIC2.39□□□□□ -2.03
Limch1Q3UH68 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Limch1Q3UH68 Gm22729-201ENSMUST00000158088 129 ntBASIC2.38□□□□□ -2.03
Limch1Q3UH68 Gm25011-201ENSMUST00000158398 126 ntBASIC2.38□□□□□ -2.03
Limch1Q3UH68 Gm22425-201ENSMUST00000158532 138 ntBASIC2.38□□□□□ -2.03
Limch1Q3UH68 Gm16550-201ENSMUST00000162550 126 ntBASIC2.38□□□□□ -2.03
Limch1Q3UH68 Gm25949-201ENSMUST00000175333 114 ntBASIC2.38□□□□□ -2.03
Limch1Q3UH68 Mir7225-201ENSMUST00000184178 54 ntBASIC2.38□□□□□ -2.03
Limch1Q3UH68 Mir21c-201ENSMUST00000184910 78 ntBASIC2.38□□□□□ -2.03
Limch1Q3UH68 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Limch1Q3UH68 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.38□□□□□ -2.03
Limch1Q3UH68 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.37□□□□□ -2.03
Limch1Q3UH68 Gm22554-201ENSMUST00000157798 147 ntBASIC2.37□□□□□ -2.03
Limch1Q3UH68 Mir669n-201ENSMUST00000158636 54 ntBASIC2.37□□□□□ -2.03
Limch1Q3UH68 Mir6419-201ENSMUST00000184784 113 ntBASIC2.37□□□□□ -2.03
Limch1Q3UH68 Gm23790-201ENSMUST00000083013 107 ntBASIC2.37□□□□□ -2.03
Limch1Q3UH68 Gm23208-201ENSMUST00000158666 127 ntBASIC2.36□□□□□ -2.03
Limch1Q3UH68 Gm24880-201ENSMUST00000158776 85 ntBASIC2.36□□□□□ -2.03
Limch1Q3UH68 Gm24366-201ENSMUST00000175383 86 ntBASIC2.36□□□□□ -2.03
Limch1Q3UH68 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC2.36□□□□□ -2.03
Limch1Q3UH68 Gm42935-201ENSMUST00000202004 151 ntBASIC2.36□□□□□ -2.03
Limch1Q3UH68 Gm45654-201ENSMUST00000210980 123 ntBASIC2.36□□□□□ -2.03
Limch1Q3UH68 Mir107-201ENSMUST00000083660 87 ntBASIC2.36□□□□□ -2.03
Limch1Q3UH68 Gm25681-201ENSMUST00000083938 106 ntBASIC2.36□□□□□ -2.03
Limch1Q3UH68 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.36□□□□□ -2.03
Limch1Q3UH68 Gm25329-201ENSMUST00000158041 126 ntBASIC2.35□□□□□ -2.03
Limch1Q3UH68 Gm25976-201ENSMUST00000158695 130 ntBASIC2.35□□□□□ -2.03
Limch1Q3UH68 Gm37557-201ENSMUST00000191640 139 ntBASIC2.35□□□□□ -2.03
Limch1Q3UH68 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Limch1Q3UH68 Gm23109-201ENSMUST00000116867 126 ntBASIC2.34□□□□□ -2.03
Limch1Q3UH68 Gm22033-201ENSMUST00000116947 90 ntBASIC2.34□□□□□ -2.03
Limch1Q3UH68 Gm25113-201ENSMUST00000157185 143 ntBASIC2.34□□□□□ -2.03
Limch1Q3UH68 Gm22727-201ENSMUST00000158090 116 ntBASIC2.34□□□□□ -2.03
Limch1Q3UH68 Gm25044-201ENSMUST00000158603 104 ntBASIC2.34□□□□□ -2.03
Limch1Q3UH68 Gm25836-201ENSMUST00000158918 123 ntBASIC2.34□□□□□ -2.03
Limch1Q3UH68 Gm44462-201ENSMUST00000199696 129 ntBASIC2.34□□□□□ -2.03
Limch1Q3UH68 Mir7217-201ENSMUST00000200304 62 ntBASIC2.34□□□□□ -2.03
Limch1Q3UH68 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.34□□□□□ -2.03
Limch1Q3UH68 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Limch1Q3UH68 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Limch1Q3UH68 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Limch1Q3UH68 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Limch1Q3UH68 Mir654-201ENSMUST00000104787 84 ntBASIC2.33□□□□□ -2.04
Limch1Q3UH68 Gm14882-201ENSMUST00000117216 218 ntBASIC2.33□□□□□ -2.04
Limch1Q3UH68 Gm16539-201ENSMUST00000160086 327 ntBASIC2.33□□□□□ -2.04
Limch1Q3UH68 Gm27443-201ENSMUST00000184660 98 ntBASIC2.33□□□□□ -2.04
Limch1Q3UH68 AC166341.8-201ENSMUST00000221267 108 ntBASIC2.33□□□□□ -2.04
Limch1Q3UH68 Gm22454-201ENSMUST00000082583 107 ntBASIC2.33□□□□□ -2.04
Limch1Q3UH68 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Limch1Q3UH68 Gm22706-201ENSMUST00000157907 112 ntBASIC2.32□□□□□ -2.04
Limch1Q3UH68 Gm23351-201ENSMUST00000158427 125 ntBASIC2.32□□□□□ -2.04
Limch1Q3UH68 Snord87-201ENSMUST00000175437 87 ntBASIC2.32□□□□□ -2.04
Limch1Q3UH68 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.32□□□□□ -2.04
Limch1Q3UH68 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.32□□□□□ -2.04
Limch1Q3UH68 Gm24412-201ENSMUST00000083426 109 ntBASIC2.32□□□□□ -2.04
Limch1Q3UH68 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Limch1Q3UH68 Gm25370-201ENSMUST00000158159 94 ntBASIC2.31□□□□□ -2.04
Limch1Q3UH68 Gm25838-201ENSMUST00000158920 120 ntBASIC2.31□□□□□ -2.04
Limch1Q3UH68 AC140930.2-201ENSMUST00000221803 109 ntBASIC2.31□□□□□ -2.04
Limch1Q3UH68 Gm22827-201ENSMUST00000083766 107 ntBASIC2.31□□□□□ -2.04
Limch1Q3UH68 Gm22723-201ENSMUST00000083820 129 ntBASIC2.31□□□□□ -2.04
Limch1Q3UH68 Gm26109-201ENSMUST00000083970 70 ntBASIC2.31□□□□□ -2.04
Limch1Q3UH68 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Limch1Q3UH68 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Limch1Q3UH68 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Limch1Q3UH68 Gm22089-201ENSMUST00000158336 102 ntBASIC2.3□□□□□ -2.04
Limch1Q3UH68 Gm22770-201ENSMUST00000158368 67 ntBASIC2.3□□□□□ -2.04
Limch1Q3UH68 Gm23349-201ENSMUST00000158432 98 ntBASIC2.3□□□□□ -2.04
Limch1Q3UH68 Snora24-201ENSMUST00000174989 130 ntBASIC2.3□□□□□ -2.04
Limch1Q3UH68 Gm22129-201ENSMUST00000179034 107 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 146.6 ms