Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm22624-201ENSMUST00000179913 108 ntBASIC2.51□□□□□ -2.01
Col18a1P39061 Gm28155-201ENSMUST00000191066 151 ntBASIC2.51□□□□□ -2.01
Col18a1P39061 Gm18433-201ENSMUST00000192747 197 ntBASIC2.51□□□□□ -2.01
Col18a1P39061 Snora69-201ENSMUST00000083708 131 ntBASIC2.51□□□□□ -2.01
Col18a1P39061 Mir374b-201ENSMUST00000102314 95 ntBASIC2.5□□□□□ -2.01
Col18a1P39061 Gm23559-201ENSMUST00000157824 103 ntBASIC2.5□□□□□ -2.01
Col18a1P39061 Gm25558-201ENSMUST00000158083 106 ntBASIC2.5□□□□□ -2.01
Col18a1P39061 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.5□□□□□ -2.01
Col18a1P39061 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Col18a1P39061 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Col18a1P39061 Gm22416-201ENSMUST00000158590 88 ntBASIC2.49□□□□□ -2.01
Col18a1P39061 Gm25044-201ENSMUST00000158603 104 ntBASIC2.49□□□□□ -2.01
Col18a1P39061 Gm25119-201ENSMUST00000158815 88 ntBASIC2.49□□□□□ -2.01
Col18a1P39061 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.49□□□□□ -2.01
Col18a1P39061 Gm25856-201ENSMUST00000082786 75 ntBASIC2.49□□□□□ -2.01
Col18a1P39061 Mir340-201ENSMUST00000083483 98 ntBASIC2.49□□□□□ -2.01
Col18a1P39061 Gm13231-201ENSMUST00000119218 2850 ntBASIC2.49□□□□□ -2.01
Col18a1P39061 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Col18a1P39061 Gm26257-201ENSMUST00000122500 107 ntBASIC2.49□□□□□ -2.01
Col18a1P39061 Gm16307-201ENSMUST00000161269 210 ntBASIC2.49□□□□□ -2.01
Col18a1P39061 Mir3106-201ENSMUST00000175401 82 ntBASIC2.49□□□□□ -2.01
Col18a1P39061 Gm19118-201ENSMUST00000222554 98 ntBASIC2.49□□□□□ -2.01
Col18a1P39061 Mir802-201ENSMUST00000103258 97 ntBASIC2.48□□□□□ -2.01
Col18a1P39061 Gm14937-201ENSMUST00000119709 208 ntBASIC2.48□□□□□ -2.01
Col18a1P39061 Gm24238-201ENSMUST00000157792 98 ntBASIC2.48□□□□□ -2.01
Col18a1P39061 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.48□□□□□ -2.01
Col18a1P39061 Gm23040-201ENSMUST00000083869 163 ntBASIC2.48□□□□□ -2.01
Col18a1P39061 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
Col18a1P39061 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Col18a1P39061 Gm24984-201ENSMUST00000104454 133 ntBASIC2.47□□□□□ -2.01
Col18a1P39061 Gm22678-201ENSMUST00000116974 101 ntBASIC2.47□□□□□ -2.01
Col18a1P39061 Gm26126-201ENSMUST00000083188 164 ntBASIC2.47□□□□□ -2.01
Col18a1P39061 Mir5117-201ENSMUST00000083226 84 ntBASIC2.47□□□□□ -2.01
Col18a1P39061 Mir1a-1-201ENSMUST00000093635 77 ntBASIC2.47□□□□□ -2.01
Col18a1P39061 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC2.47□□□□□ -2.01
Col18a1P39061 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.46□□□□□ -2.01
Col18a1P39061 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
Col18a1P39061 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Col18a1P39061 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC2.46□□□□□ -2.02
Col18a1P39061 Gm24632-201ENSMUST00000122770 323 ntBASIC2.46□□□□□ -2.02
Col18a1P39061 Gm23716-201ENSMUST00000157348 144 ntBASIC2.46□□□□□ -2.02
Col18a1P39061 Gm24199-201ENSMUST00000157808 136 ntBASIC2.46□□□□□ -2.02
Col18a1P39061 Gm24510-201ENSMUST00000174965 94 ntBASIC2.46□□□□□ -2.02
Col18a1P39061 Gm25933-201ENSMUST00000178943 108 ntBASIC2.46□□□□□ -2.02
Col18a1P39061 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.46□□□□□ -2.02
Col18a1P39061 Gm26301-201ENSMUST00000104813 95 ntBASIC2.46□□□□□ -2.02
Col18a1P39061 Gm24598-201ENSMUST00000122510 74 ntBASIC2.46□□□□□ -2.02
Col18a1P39061 Scarna3b-201ENSMUST00000157533 139 ntBASIC2.46□□□□□ -2.02
Col18a1P39061 Gm23933-201ENSMUST00000178405 79 ntBASIC2.46□□□□□ -2.02
Col18a1P39061 Gm27686-201ENSMUST00000185123 91 ntBASIC2.46□□□□□ -2.02
Col18a1P39061 Mir155-201ENSMUST00000083463 65 ntBASIC2.45□□□□□ -2.02
Col18a1P39061 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
Col18a1P39061 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.44□□□□□ -2.02
Col18a1P39061 Gm23528-201ENSMUST00000104571 132 ntBASIC2.44□□□□□ -2.02
Col18a1P39061 Gm22732-201ENSMUST00000158093 121 ntBASIC2.44□□□□□ -2.02
Col18a1P39061 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.44□□□□□ -2.02
Col18a1P39061 Gm12309-201ENSMUST00000119889 182 ntBASIC2.44□□□□□ -2.02
Col18a1P39061 AL772271.1-201ENSMUST00000196848 65 ntBASIC2.44□□□□□ -2.02
Col18a1P39061 Gm44478-201ENSMUST00000204875 114 ntBASIC2.44□□□□□ -2.02
Col18a1P39061 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.44□□□□□ -2.02
Col18a1P39061 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Col18a1P39061 Gm12432-201ENSMUST00000119540 186 ntBASIC2.43□□□□□ -2.02
Col18a1P39061 Gm26105-201ENSMUST00000157253 190 ntBASIC2.43□□□□□ -2.02
Col18a1P39061 Gm25329-201ENSMUST00000158041 126 ntBASIC2.43□□□□□ -2.02
Col18a1P39061 Mir6394-201ENSMUST00000184738 99 ntBASIC2.43□□□□□ -2.02
Col18a1P39061 Gm44482-201ENSMUST00000199232 103 ntBASIC2.43□□□□□ -2.02
Col18a1P39061 Gm44024-201ENSMUST00000203008 476 ntBASIC2.43□□□□□ -2.02
Col18a1P39061 Gm6293-201ENSMUST00000050339 195 ntBASIC2.43□□□□□ -2.02
Col18a1P39061 Gm25798-201ENSMUST00000082641 107 ntBASIC2.43□□□□□ -2.02
Col18a1P39061 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.43□□□□□ -2.02
Col18a1P39061 Mir411-201ENSMUST00000083543 82 ntBASIC2.43□□□□□ -2.02
Col18a1P39061 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col18a1P39061 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col18a1P39061 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Col18a1P39061 Gm23015-201ENSMUST00000104145 128 ntBASIC2.42□□□□□ -2.02
Col18a1P39061 Gm25496-201ENSMUST00000104430 120 ntBASIC2.42□□□□□ -2.02
Col18a1P39061 Mir878-201ENSMUST00000104680 78 ntBASIC2.42□□□□□ -2.02
Col18a1P39061 Gm11248-201ENSMUST00000119568 201 ntBASIC2.42□□□□□ -2.02
Col18a1P39061 Gm24868-201ENSMUST00000157265 136 ntBASIC2.42□□□□□ -2.02
Col18a1P39061 Gm24077-201ENSMUST00000158183 136 ntBASIC2.42□□□□□ -2.02
Col18a1P39061 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.42□□□□□ -2.02
Col18a1P39061 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.42□□□□□ -2.02
Col18a1P39061 Mir7021-201ENSMUST00000197026 63 ntBASIC2.42□□□□□ -2.02
Col18a1P39061 Mir320-201ENSMUST00000083594 82 ntBASIC2.42□□□□□ -2.02
Col18a1P39061 Gm23347-201ENSMUST00000083823 82 ntBASIC2.42□□□□□ -2.02
Col18a1P39061 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.42□□□□□ -2.02
Col18a1P39061 Mir1931-201ENSMUST00000158589 119 ntBASIC2.41□□□□□ -2.02
Col18a1P39061 AC159093.2-201ENSMUST00000227881 297 ntBASIC2.41□□□□□ -2.02
Col18a1P39061 Gm25886-201ENSMUST00000157780 114 ntBASIC2.41□□□□□ -2.02
Col18a1P39061 Gm22089-201ENSMUST00000158336 102 ntBASIC2.41□□□□□ -2.02
Col18a1P39061 Mir5136-201ENSMUST00000175573 76 ntBASIC2.41□□□□□ -2.02
Col18a1P39061 Gm27979-201ENSMUST00000185126 56 ntBASIC2.41□□□□□ -2.02
Col18a1P39061 Gm44459-201ENSMUST00000203926 160 ntBASIC2.41□□□□□ -2.02
Col18a1P39061 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col18a1P39061 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
Col18a1P39061 Gm7123-201ENSMUST00000117647 213 ntBASIC2.4□□□□□ -2.03
Col18a1P39061 Gm24902-201ENSMUST00000158126 123 ntBASIC2.4□□□□□ -2.03
Col18a1P39061 Gm24331-201ENSMUST00000175099 67 ntBASIC2.4□□□□□ -2.03
Col18a1P39061 Gm23801-201ENSMUST00000175561 67 ntBASIC2.4□□□□□ -2.03
Col18a1P39061 Gm24485-201ENSMUST00000178283 67 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 154.4 ms