Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Mir6386-201ENSMUST00000183558 104 ntBASIC2.16□□□□□ -2.06
Hoxd3P09027 Gm3724-201ENSMUST00000197957 349 ntBASIC2.16□□□□□ -2.06
Hoxd3P09027 Gm24313-201ENSMUST00000082561 133 ntBASIC2.16□□□□□ -2.06
Hoxd3P09027 Gm25038-201ENSMUST00000082928 130 ntBASIC2.16□□□□□ -2.06
Hoxd3P09027 Gm25705-201ENSMUST00000083119 104 ntBASIC2.16□□□□□ -2.06
Hoxd3P09027 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Hoxd3P09027 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.16□□□□□ -2.06
Hoxd3P09027 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.15□□□□□ -2.06
Hoxd3P09027 Gm26277-201ENSMUST00000157097 152 ntBASIC2.15□□□□□ -2.07
Hoxd3P09027 Gm24443-201ENSMUST00000157242 132 ntBASIC2.15□□□□□ -2.07
Hoxd3P09027 Gm25160-201ENSMUST00000158914 102 ntBASIC2.15□□□□□ -2.07
Hoxd3P09027 Gm24366-201ENSMUST00000175383 86 ntBASIC2.15□□□□□ -2.07
Hoxd3P09027 Mir7242-201ENSMUST00000183710 79 ntBASIC2.15□□□□□ -2.07
Hoxd3P09027 Mir6419-201ENSMUST00000184784 113 ntBASIC2.15□□□□□ -2.07
Hoxd3P09027 Gm20118-201ENSMUST00000187207 162 ntBASIC2.15□□□□□ -2.07
Hoxd3P09027 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.15□□□□□ -2.07
Hoxd3P09027 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
Hoxd3P09027 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.14□□□□□ -2.07
Hoxd3P09027 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.14□□□□□ -2.07
Hoxd3P09027 Gm23128-201ENSMUST00000104257 132 ntBASIC2.14□□□□□ -2.07
Hoxd3P09027 Gm24068-201ENSMUST00000104513 132 ntBASIC2.14□□□□□ -2.07
Hoxd3P09027 DQ267100-201ENSMUST00000122600 72 ntBASIC2.14□□□□□ -2.07
Hoxd3P09027 Snord93-201ENSMUST00000175580 71 ntBASIC2.14□□□□□ -2.07
Hoxd3P09027 Gm25528-201ENSMUST00000180264 132 ntBASIC2.14□□□□□ -2.07
Hoxd3P09027 Gm28256-201ENSMUST00000188953 139 ntBASIC2.14□□□□□ -2.07
Hoxd3P09027 Gm28559-201ENSMUST00000190532 139 ntBASIC2.14□□□□□ -2.07
Hoxd3P09027 Gm23128-202ENSMUST00000196578 133 ntBASIC2.14□□□□□ -2.07
Hoxd3P09027 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.14□□□□□ -2.07
Hoxd3P09027 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Hoxd3P09027 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.14□□□□□ -2.07
Hoxd3P09027 Mir344c-201ENSMUST00000103919 92 ntBASIC2.13□□□□□ -2.07
Hoxd3P09027 Mir1191-201ENSMUST00000116883 120 ntBASIC2.13□□□□□ -2.07
Hoxd3P09027 Gm25270-201ENSMUST00000122606 138 ntBASIC2.13□□□□□ -2.07
Hoxd3P09027 Gm26485-201ENSMUST00000158019 64 ntBASIC2.13□□□□□ -2.07
Hoxd3P09027 Gm26406-201ENSMUST00000158503 124 ntBASIC2.13□□□□□ -2.07
Hoxd3P09027 Gm16111-201ENSMUST00000162128 285 ntBASIC2.13□□□□□ -2.07
Hoxd3P09027 Gm5900-201ENSMUST00000179862 375 ntBASIC2.13□□□□□ -2.07
Hoxd3P09027 Gm43626-201ENSMUST00000198575 162 ntBASIC2.13□□□□□ -2.07
Hoxd3P09027 Gm44903-201ENSMUST00000206840 130 ntBASIC2.13□□□□□ -2.07
Hoxd3P09027 Gm44555-201ENSMUST00000209008 148 ntBASIC2.13□□□□□ -2.07
Hoxd3P09027 Mir532-201ENSMUST00000093630 96 ntBASIC2.13□□□□□ -2.07
Hoxd3P09027 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Hoxd3P09027 Gm16171-201ENSMUST00000118004 324 ntBASIC2.12□□□□□ -2.07
Hoxd3P09027 Gm11966-201ENSMUST00000119907 87 ntBASIC2.12□□□□□ -2.07
Hoxd3P09027 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Hoxd3P09027 Gm25153-201ENSMUST00000157118 156 ntBASIC2.12□□□□□ -2.07
Hoxd3P09027 Gm23208-201ENSMUST00000158666 127 ntBASIC2.12□□□□□ -2.07
Hoxd3P09027 Gm27527-201ENSMUST00000183903 99 ntBASIC2.12□□□□□ -2.07
Hoxd3P09027 Gm45452-201ENSMUST00000210905 177 ntBASIC2.12□□□□□ -2.07
Hoxd3P09027 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hoxd3P09027 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Hoxd3P09027 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Hoxd3P09027 Mir1195-201ENSMUST00000116818 98 ntBASIC2.11□□□□□ -2.07
Hoxd3P09027 Gm24907-201ENSMUST00000116932 128 ntBASIC2.11□□□□□ -2.07
Hoxd3P09027 Gm14039-201ENSMUST00000118705 101 ntBASIC2.11□□□□□ -2.07
Hoxd3P09027 Gm24291-201ENSMUST00000157633 162 ntBASIC2.11□□□□□ -2.07
Hoxd3P09027 Gm22330-201ENSMUST00000158068 115 ntBASIC2.11□□□□□ -2.07
Hoxd3P09027 Gm21885-201ENSMUST00000178891 327 ntBASIC2.11□□□□□ -2.07
Hoxd3P09027 Gm27786-201ENSMUST00000184337 70 ntBASIC2.11□□□□□ -2.07
Hoxd3P09027 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.11□□□□□ -2.07
Hoxd3P09027 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.11□□□□□ -2.07
Hoxd3P09027 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.11□□□□□ -2.07
Hoxd3P09027 Gm23900-201ENSMUST00000157569 108 ntBASIC2.1□□□□□ -2.07
Hoxd3P09027 Gm26358-201ENSMUST00000158215 97 ntBASIC2.1□□□□□ -2.07
Hoxd3P09027 Gm25470-201ENSMUST00000175576 111 ntBASIC2.1□□□□□ -2.07
Hoxd3P09027 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.1□□□□□ -2.07
Hoxd3P09027 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
Hoxd3P09027 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Hoxd3P09027 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.09□□□□□ -2.07
Hoxd3P09027 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
Hoxd3P09027 Gm25992-201ENSMUST00000102437 109 ntBASIC2.09□□□□□ -2.07
Hoxd3P09027 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Hoxd3P09027 Gm22674-201ENSMUST00000104413 131 ntBASIC2.09□□□□□ -2.07
Hoxd3P09027 Gm22200-201ENSMUST00000158614 67 ntBASIC2.09□□□□□ -2.07
Hoxd3P09027 Gm44966-201ENSMUST00000208096 157 ntBASIC2.09□□□□□ -2.07
Hoxd3P09027 Gm25798-201ENSMUST00000082641 107 ntBASIC2.09□□□□□ -2.07
Hoxd3P09027 Gm26207-201ENSMUST00000082909 104 ntBASIC2.09□□□□□ -2.07
Hoxd3P09027 Gm23482-201ENSMUST00000104172 122 ntBASIC2.08□□□□□ -2.08
Hoxd3P09027 Gm26247-201ENSMUST00000116702 91 ntBASIC2.08□□□□□ -2.08
Hoxd3P09027 Gm11694-201ENSMUST00000118637 159 ntBASIC2.08□□□□□ -2.08
Hoxd3P09027 Gm3788-201ENSMUST00000119949 136 ntBASIC2.08□□□□□ -2.08
Hoxd3P09027 Gm24686-201ENSMUST00000157755 93 ntBASIC2.08□□□□□ -2.08
Hoxd3P09027 Gm24769-201ENSMUST00000158506 129 ntBASIC2.08□□□□□ -2.08
Hoxd3P09027 Gm24736-201ENSMUST00000158862 130 ntBASIC2.08□□□□□ -2.08
Hoxd3P09027 Gm25838-201ENSMUST00000158920 120 ntBASIC2.08□□□□□ -2.08
Hoxd3P09027 Mir3092-201ENSMUST00000174954 96 ntBASIC2.08□□□□□ -2.08
Hoxd3P09027 Gm20718-201ENSMUST00000176058 259 ntBASIC2.08□□□□□ -2.08
Hoxd3P09027 Gm23726-201ENSMUST00000178937 67 ntBASIC2.08□□□□□ -2.08
Hoxd3P09027 Mir7013-201ENSMUST00000183540 72 ntBASIC2.08□□□□□ -2.08
Hoxd3P09027 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.08□□□□□ -2.08
Hoxd3P09027 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.08□□□□□ -2.08
Hoxd3P09027 Gm26458-201ENSMUST00000082832 128 ntBASIC2.08□□□□□ -2.08
Hoxd3P09027 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
Hoxd3P09027 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.08□□□□□ -2.08
Hoxd3P09027 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Hoxd3P09027 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Hoxd3P09027 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Hoxd3P09027 Gm24122-201ENSMUST00000104107 132 ntBASIC2.07□□□□□ -2.08
Hoxd3P09027 Gm26133-201ENSMUST00000157363 100 ntBASIC2.07□□□□□ -2.08
Hoxd3P09027 Gm22944-201ENSMUST00000158662 133 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 156.3 ms