Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Mir377-201ENSMUST00000083504 68 ntBASIC0.09□□□□□ -2.4
Trbv1A0A0B4J1G7 Mir411-201ENSMUST00000083543 82 ntBASIC0.09□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.08□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm24121-201ENSMUST00000102029 106 ntBASIC0.08□□□□□ -2.4
Trbv1A0A0B4J1G7 Snord19-201ENSMUST00000104609 76 ntBASIC0.08□□□□□ -2.4
Trbv1A0A0B4J1G7 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.08□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm23841-201ENSMUST00000116951 114 ntBASIC0.08□□□□□ -2.4
Trbv1A0A0B4J1G7 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.08□□□□□ -2.4
Trbv1A0A0B4J1G7 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.08□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm28020-201ENSMUST00000157739 67 ntBASIC0.08□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm25952-201ENSMUST00000175329 74 ntBASIC0.08□□□□□ -2.4
Trbv1A0A0B4J1G7 Mir7077-201ENSMUST00000183991 57 ntBASIC0.08□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm42795-201ENSMUST00000198847 76 ntBASIC0.08□□□□□ -2.4
Trbv1A0A0B4J1G7 Snord60-201ENSMUST00000082834 78 ntBASIC0.08□□□□□ -2.4
Trbv1A0A0B4J1G7 Mir489-201ENSMUST00000093599 107 ntBASIC0.08□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.08□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm22557-201ENSMUST00000157804 102 ntBASIC0.07□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm25015-201ENSMUST00000158400 128 ntBASIC0.07□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm23821-201ENSMUST00000158738 106 ntBASIC0.07□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm23917-201ENSMUST00000175256 98 ntBASIC0.07□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm23567-201ENSMUST00000178005 107 ntBASIC0.07□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm27476-201ENSMUST00000183366 104 ntBASIC0.07□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm23301-201ENSMUST00000082713 65 ntBASIC0.07□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm24460-201ENSMUST00000082731 106 ntBASIC0.07□□□□□ -2.4
Trbv1A0A0B4J1G7 Mir541-201ENSMUST00000102097 90 ntBASIC0.06□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm23881-201ENSMUST00000116872 66 ntBASIC0.06□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm6897-201ENSMUST00000117714 138 ntBASIC0.06□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm14758-201ENSMUST00000119104 138 ntBASIC0.06□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm10548-202ENSMUST00000165672 272 ntBASIC0.06□□□□□ -2.4
Trbv1A0A0B4J1G7 Mir721-201ENSMUST00000200230 88 ntBASIC0.06□□□□□ -2.4
Trbv1A0A0B4J1G7 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.06□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Trbv1A0A0B4J1G7 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
Trbv1A0A0B4J1G7 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
Trbv1A0A0B4J1G7 Scarna9-201ENSMUST00000104318 70 ntBASIC0.05□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm24729-201ENSMUST00000158225 137 ntBASIC0.05□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm23761-201ENSMUST00000158347 104 ntBASIC0.05□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm25718-201ENSMUST00000158632 118 ntBASIC0.05□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm23047-201ENSMUST00000177661 94 ntBASIC0.05□□□□□ -2.4
Trbv1A0A0B4J1G7 Mir8107-201ENSMUST00000184024 117 ntBASIC0.05□□□□□ -2.4
Trbv1A0A0B4J1G7 Mir6905-201ENSMUST00000184228 70 ntBASIC0.05□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm44455-201ENSMUST00000200061 82 ntBASIC0.05□□□□□ -2.4
Trbv1A0A0B4J1G7 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.05□□□□□ -2.4
Trbv1A0A0B4J1G7 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC0.05□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm22744-201ENSMUST00000083444 65 ntBASIC0.05□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm25894-201ENSMUST00000083458 75 ntBASIC0.05□□□□□ -2.4
Trbv1A0A0B4J1G7 Mir200b-201ENSMUST00000083615 70 ntBASIC0.05□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm24278-201ENSMUST00000104239 127 ntBASIC0.04□□□□□ -2.4
Trbv1A0A0B4J1G7 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.04□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm26279-201ENSMUST00000157095 102 ntBASIC0.04□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm22332-201ENSMUST00000158072 126 ntBASIC0.04□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm25364-201ENSMUST00000158851 107 ntBASIC0.04□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm26158-201ENSMUST00000158973 119 ntBASIC0.04□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm27943-201ENSMUST00000184844 116 ntBASIC0.04□□□□□ -2.4
Trbv1A0A0B4J1G7 Mir219b-201ENSMUST00000198317 65 ntBASIC0.04□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm44989-201ENSMUST00000204749 217 ntBASIC0.04□□□□□ -2.4
Trbv1A0A0B4J1G7 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.04□□□□□ -2.4
Trbv1A0A0B4J1G7 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.04□□□□□ -2.4
Trbv1A0A0B4J1G7 Mir1197-201ENSMUST00000117037 120 ntBASIC0.03□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm15654-201ENSMUST00000152660 300 ntBASIC0.03□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm22431-201ENSMUST00000158545 107 ntBASIC0.03□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm16550-201ENSMUST00000162550 126 ntBASIC0.03□□□□□ -2.4
Trbv1A0A0B4J1G7 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.03□□□□□ -2.4
Trbv1A0A0B4J1G7 Gm22738-201ENSMUST00000083440 147 ntBASIC0.03□□□□□ -2.4
Trbv1A0A0B4J1G7 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
Trbv1A0A0B4J1G7 Gm25408-201ENSMUST00000104104 133 ntBASIC0.02□□□□□ -2.41
Trbv1A0A0B4J1G7 Gm22145-201ENSMUST00000157396 148 ntBASIC0.02□□□□□ -2.41
Trbv1A0A0B4J1G7 Gm22850-201ENSMUST00000157714 82 ntBASIC0.02□□□□□ -2.41
Trbv1A0A0B4J1G7 Gm23892-201ENSMUST00000158105 130 ntBASIC0.02□□□□□ -2.41
Trbv1A0A0B4J1G7 Mir3105-201ENSMUST00000175480 85 ntBASIC0.02□□□□□ -2.41
Trbv1A0A0B4J1G7 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.02□□□□□ -2.41
Trbv1A0A0B4J1G7 Gm25633-201ENSMUST00000178565 107 ntBASIC0.02□□□□□ -2.41
Trbv1A0A0B4J1G7 Gm28001-201ENSMUST00000183561 117 ntBASIC0.02□□□□□ -2.41
Trbv1A0A0B4J1G7 Mir7039-201ENSMUST00000183852 85 ntBASIC0.02□□□□□ -2.41
Trbv1A0A0B4J1G7 Mir6928-201ENSMUST00000185166 70 ntBASIC0.02□□□□□ -2.41
Trbv1A0A0B4J1G7 Gm44469-201ENSMUST00000198558 79 ntBASIC0.02□□□□□ -2.41
Trbv1A0A0B4J1G7 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.02□□□□□ -2.41
Trbv1A0A0B4J1G7 Gm44807-201ENSMUST00000206115 154 ntBASIC0.02□□□□□ -2.41
Trbv1A0A0B4J1G7 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.02□□□□□ -2.41
Trbv1A0A0B4J1G7 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.02□□□□□ -2.41
Trbv1A0A0B4J1G7 Gm24208-201ENSMUST00000082783 135 ntBASIC0.02□□□□□ -2.41
Trbv1A0A0B4J1G7 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.02□□□□□ -2.41
Trbv1A0A0B4J1G7 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
Trbv1A0A0B4J1G7 Gm23857-201ENSMUST00000158379 111 ntBASIC0.01□□□□□ -2.41
Trbv1A0A0B4J1G7 Gm24321-201ENSMUST00000175348 80 ntBASIC0.01□□□□□ -2.41
Trbv1A0A0B4J1G7 Gm27402-201ENSMUST00000183890 120 ntBASIC0.01□□□□□ -2.41
Trbv1A0A0B4J1G7 Mir30f-201ENSMUST00000196073 92 ntBASIC0.01□□□□□ -2.41
Trbv1A0A0B4J1G7 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.01□□□□□ -2.41
Trbv1A0A0B4J1G7 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.01□□□□□ -2.41
Trbv1A0A0B4J1G7 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Trbv1A0A0B4J1G7 Snord95-201ENSMUST00000082846 68 ntBASIC0.01□□□□□ -2.41
Trbv1A0A0B4J1G7 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Trbv1A0A0B4J1G7 Gm14626-201ENSMUST00000117619 216 ntBASIC0□□□□□ -2.41
Trbv1A0A0B4J1G7 Gm24575-201ENSMUST00000175502 77 ntBASIC0□□□□□ -2.41
Trbv1A0A0B4J1G7 Mir6342-201ENSMUST00000183870 125 ntBASIC0□□□□□ -2.41
Trbv1A0A0B4J1G7 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0□□□□□ -2.41
Trbv1A0A0B4J1G7 AL606472.1-201ENSMUST00000224628 275 ntBASIC0□□□□□ -2.41
Trbv1A0A0B4J1G7 Mir9-2-201ENSMUST00000083490 72 ntBASIC0□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 132.1 ms