Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm6985-201ENSMUST00000121255 271 ntBASIC0.44□□□□□ -2.34
Lrif1Q8CDD9 Gm23605-201ENSMUST00000157255 127 ntBASIC0.44□□□□□ -2.34
Lrif1Q8CDD9 Gm22815-201ENSMUST00000157451 62 ntBASIC0.44□□□□□ -2.34
Lrif1Q8CDD9 Gm28020-201ENSMUST00000157739 67 ntBASIC0.44□□□□□ -2.34
Lrif1Q8CDD9 Gm25223-201ENSMUST00000158200 110 ntBASIC0.44□□□□□ -2.34
Lrif1Q8CDD9 Gm26160-201ENSMUST00000158965 63 ntBASIC0.44□□□□□ -2.34
Lrif1Q8CDD9 Gm44211-201ENSMUST00000204867 145 ntBASIC0.44□□□□□ -2.34
Lrif1Q8CDD9 Gm45859-201ENSMUST00000212794 214 ntBASIC0.44□□□□□ -2.34
Lrif1Q8CDD9 Snord69-201ENSMUST00000104024 80 ntBASIC0.43□□□□□ -2.34
Lrif1Q8CDD9 Gm26076-201ENSMUST00000104065 105 ntBASIC0.43□□□□□ -2.34
Lrif1Q8CDD9 Snord100-201ENSMUST00000116836 74 ntBASIC0.43□□□□□ -2.34
Lrif1Q8CDD9 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.43□□□□□ -2.34
Lrif1Q8CDD9 Gm24509-201ENSMUST00000157086 101 ntBASIC0.43□□□□□ -2.34
Lrif1Q8CDD9 Gm25358-201ENSMUST00000157189 101 ntBASIC0.43□□□□□ -2.34
Lrif1Q8CDD9 Gm24963-201ENSMUST00000157916 144 ntBASIC0.43□□□□□ -2.34
Lrif1Q8CDD9 Gm25771-201ENSMUST00000158565 144 ntBASIC0.43□□□□□ -2.34
Lrif1Q8CDD9 Gm23416-201ENSMUST00000175520 95 ntBASIC0.43□□□□□ -2.34
Lrif1Q8CDD9 Gm44989-201ENSMUST00000204749 217 ntBASIC0.43□□□□□ -2.34
Lrif1Q8CDD9 Mir541-201ENSMUST00000102097 90 ntBASIC0.42□□□□□ -2.34
Lrif1Q8CDD9 Gm25464-201ENSMUST00000175481 107 ntBASIC0.42□□□□□ -2.34
Lrif1Q8CDD9 Gm44490-201ENSMUST00000198566 127 ntBASIC0.42□□□□□ -2.34
Lrif1Q8CDD9 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Lrif1Q8CDD9 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Lrif1Q8CDD9 Gm24121-201ENSMUST00000102029 106 ntBASIC0.41□□□□□ -2.34
Lrif1Q8CDD9 Gm25611-201ENSMUST00000104017 133 ntBASIC0.41□□□□□ -2.34
Lrif1Q8CDD9 Gm6897-201ENSMUST00000117714 138 ntBASIC0.41□□□□□ -2.34
Lrif1Q8CDD9 Gm14758-201ENSMUST00000119104 138 ntBASIC0.41□□□□□ -2.34
Lrif1Q8CDD9 Gm22466-201ENSMUST00000175278 69 ntBASIC0.41□□□□□ -2.34
Lrif1Q8CDD9 Gm43944-201ENSMUST00000205220 120 ntBASIC0.41□□□□□ -2.34
Lrif1Q8CDD9 Gm25895-201ENSMUST00000083714 100 ntBASIC0.41□□□□□ -2.34
Lrif1Q8CDD9 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Lrif1Q8CDD9 Gm15289-201ENSMUST00000117793 244 ntBASIC0.4□□□□□ -2.35
Lrif1Q8CDD9 Gm25494-201ENSMUST00000158143 100 ntBASIC0.4□□□□□ -2.35
Lrif1Q8CDD9 Gm23763-201ENSMUST00000158345 60 ntBASIC0.4□□□□□ -2.35
Lrif1Q8CDD9 Gm24549-201ENSMUST00000158647 139 ntBASIC0.4□□□□□ -2.35
Lrif1Q8CDD9 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Lrif1Q8CDD9 Gm26326-201ENSMUST00000083070 129 ntBASIC0.4□□□□□ -2.35
Lrif1Q8CDD9 Gm14884-201ENSMUST00000120456 196 ntBASIC0.39□□□□□ -2.35
Lrif1Q8CDD9 Gm23892-201ENSMUST00000158105 130 ntBASIC0.39□□□□□ -2.35
Lrif1Q8CDD9 Gm24728-201ENSMUST00000158226 125 ntBASIC0.39□□□□□ -2.35
Lrif1Q8CDD9 Mir669o-201ENSMUST00000103898 96 ntBASIC0.38□□□□□ -2.35
Lrif1Q8CDD9 Snord19-201ENSMUST00000104609 76 ntBASIC0.38□□□□□ -2.35
Lrif1Q8CDD9 Gm6952-201ENSMUST00000118629 159 ntBASIC0.38□□□□□ -2.35
Lrif1Q8CDD9 Gm23672-201ENSMUST00000157471 107 ntBASIC0.38□□□□□ -2.35
Lrif1Q8CDD9 Gm25015-201ENSMUST00000158400 128 ntBASIC0.38□□□□□ -2.35
Lrif1Q8CDD9 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.38□□□□□ -2.35
Lrif1Q8CDD9 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.38□□□□□ -2.35
Lrif1Q8CDD9 Gm26116-201ENSMUST00000175600 77 ntBASIC0.38□□□□□ -2.35
Lrif1Q8CDD9 Gm23047-201ENSMUST00000177661 94 ntBASIC0.38□□□□□ -2.35
Lrif1Q8CDD9 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.38□□□□□ -2.35
Lrif1Q8CDD9 Gm22744-201ENSMUST00000083444 65 ntBASIC0.38□□□□□ -2.35
Lrif1Q8CDD9 Mir532-201ENSMUST00000093630 96 ntBASIC0.38□□□□□ -2.35
Lrif1Q8CDD9 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.38□□□□□ -2.35
Lrif1Q8CDD9 Gm11936-201ENSMUST00000118323 160 ntBASIC0.37□□□□□ -2.35
Lrif1Q8CDD9 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.37□□□□□ -2.35
Lrif1Q8CDD9 Gm22145-201ENSMUST00000157396 148 ntBASIC0.37□□□□□ -2.35
Lrif1Q8CDD9 Gm25364-201ENSMUST00000158851 107 ntBASIC0.37□□□□□ -2.35
Lrif1Q8CDD9 Gm25300-201ENSMUST00000175284 84 ntBASIC0.37□□□□□ -2.35
Lrif1Q8CDD9 Mir7079-201ENSMUST00000184697 69 ntBASIC0.37□□□□□ -2.35
Lrif1Q8CDD9 Gm44828-201ENSMUST00000203745 106 ntBASIC0.37□□□□□ -2.35
Lrif1Q8CDD9 Mir186-201ENSMUST00000083497 71 ntBASIC0.37□□□□□ -2.35
Lrif1Q8CDD9 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
Lrif1Q8CDD9 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.36□□□□□ -2.35
Lrif1Q8CDD9 Gm12686-201ENSMUST00000120546 397 ntBASIC0.36□□□□□ -2.35
Lrif1Q8CDD9 Gm26279-201ENSMUST00000157095 102 ntBASIC0.36□□□□□ -2.35
Lrif1Q8CDD9 Gm25393-201ENSMUST00000157336 285 ntBASIC0.36□□□□□ -2.35
Lrif1Q8CDD9 Gm24476-201ENSMUST00000157437 131 ntBASIC0.36□□□□□ -2.35
Lrif1Q8CDD9 Gm23783-201ENSMUST00000157941 102 ntBASIC0.36□□□□□ -2.35
Lrif1Q8CDD9 Gm23838-201ENSMUST00000158067 162 ntBASIC0.36□□□□□ -2.35
Lrif1Q8CDD9 Gm25718-201ENSMUST00000158632 118 ntBASIC0.36□□□□□ -2.35
Lrif1Q8CDD9 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.36□□□□□ -2.35
Lrif1Q8CDD9 Gm25787-201ENSMUST00000104709 92 ntBASIC0.35□□□□□ -2.35
Lrif1Q8CDD9 Gm23989-201ENSMUST00000117030 66 ntBASIC0.35□□□□□ -2.35
Lrif1Q8CDD9 Gm22101-201ENSMUST00000157928 103 ntBASIC0.35□□□□□ -2.35
Lrif1Q8CDD9 Gm25769-201ENSMUST00000158569 127 ntBASIC0.35□□□□□ -2.35
Lrif1Q8CDD9 Gm27476-201ENSMUST00000183366 104 ntBASIC0.35□□□□□ -2.35
Lrif1Q8CDD9 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.35□□□□□ -2.35
Lrif1Q8CDD9 Gm22576-201ENSMUST00000083733 104 ntBASIC0.35□□□□□ -2.35
Lrif1Q8CDD9 Gm24729-201ENSMUST00000158225 137 ntBASIC0.34□□□□□ -2.36
Lrif1Q8CDD9 Gm23567-201ENSMUST00000178005 107 ntBASIC0.34□□□□□ -2.36
Lrif1Q8CDD9 Mir219b-201ENSMUST00000198317 65 ntBASIC0.34□□□□□ -2.36
Lrif1Q8CDD9 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.34□□□□□ -2.36
Lrif1Q8CDD9 Gm24762-201ENSMUST00000083689 104 ntBASIC0.34□□□□□ -2.36
Lrif1Q8CDD9 Gm26303-201ENSMUST00000116845 119 ntBASIC0.33□□□□□ -2.36
Lrif1Q8CDD9 Gm14001-201ENSMUST00000118847 247 ntBASIC0.33□□□□□ -2.36
Lrif1Q8CDD9 Gm22433-201ENSMUST00000158550 142 ntBASIC0.33□□□□□ -2.36
Lrif1Q8CDD9 Gm24225-201ENSMUST00000158825 98 ntBASIC0.33□□□□□ -2.36
Lrif1Q8CDD9 Gm16546-201ENSMUST00000159442 355 ntBASIC0.33□□□□□ -2.36
Lrif1Q8CDD9 Mir7010-201ENSMUST00000183464 63 ntBASIC0.33□□□□□ -2.36
Lrif1Q8CDD9 Gm19572-201ENSMUST00000214326 338 ntBASIC0.33□□□□□ -2.36
Lrif1Q8CDD9 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.33□□□□□ -2.36
Lrif1Q8CDD9 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.33□□□□□ -2.36
Lrif1Q8CDD9 Gm24276-201ENSMUST00000102181 110 ntBASIC0.32□□□□□ -2.36
Lrif1Q8CDD9 Gm14039-201ENSMUST00000118705 101 ntBASIC0.32□□□□□ -2.36
Lrif1Q8CDD9 Gm25444-201ENSMUST00000158999 113 ntBASIC0.32□□□□□ -2.36
Lrif1Q8CDD9 Gm16550-201ENSMUST00000162550 126 ntBASIC0.32□□□□□ -2.36
Lrif1Q8CDD9 Snora15-201ENSMUST00000177461 131 ntBASIC0.32□□□□□ -2.36
Lrif1Q8CDD9 Gm25633-201ENSMUST00000178565 107 ntBASIC0.32□□□□□ -2.36
Lrif1Q8CDD9 Mir6390-201ENSMUST00000184405 129 ntBASIC0.32□□□□□ -2.36
Lrif1Q8CDD9 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 162.6 ms