Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm25090-201ENSMUST00000104000 132 ntBASIC2.4□□□□□ -2.03
Trim56Q80VI1 Gm16328-201ENSMUST00000126985 196 ntBASIC2.4□□□□□ -2.03
Trim56Q80VI1 Gm24478-201ENSMUST00000157439 158 ntBASIC2.4□□□□□ -2.03
Trim56Q80VI1 Gm22264-201ENSMUST00000178200 107 ntBASIC2.4□□□□□ -2.03
Trim56Q80VI1 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.4□□□□□ -2.03
Trim56Q80VI1 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Trim56Q80VI1 Gm23507-201ENSMUST00000083078 107 ntBASIC2.4□□□□□ -2.03
Trim56Q80VI1 Gm24098-201ENSMUST00000102075 109 ntBASIC2.39□□□□□ -2.03
Trim56Q80VI1 Gm25381-201ENSMUST00000102078 109 ntBASIC2.39□□□□□ -2.03
Trim56Q80VI1 Gm25022-201ENSMUST00000102205 83 ntBASIC2.39□□□□□ -2.03
Trim56Q80VI1 Mir467a-6-201ENSMUST00000177790 83 ntBASIC2.39□□□□□ -2.03
Trim56Q80VI1 Mir467a-3-201ENSMUST00000178082 83 ntBASIC2.39□□□□□ -2.03
Trim56Q80VI1 Mir467a-7-201ENSMUST00000178635 83 ntBASIC2.39□□□□□ -2.03
Trim56Q80VI1 Mir467a-10-201ENSMUST00000179320 83 ntBASIC2.39□□□□□ -2.03
Trim56Q80VI1 Mir467a-5-201ENSMUST00000179352 83 ntBASIC2.39□□□□□ -2.03
Trim56Q80VI1 Mir467a-2-201ENSMUST00000179447 83 ntBASIC2.39□□□□□ -2.03
Trim56Q80VI1 Mir467a-9-201ENSMUST00000179752 83 ntBASIC2.39□□□□□ -2.03
Trim56Q80VI1 Mir467a-4-201ENSMUST00000179923 83 ntBASIC2.39□□□□□ -2.03
Trim56Q80VI1 Mir467a-8-201ENSMUST00000180070 83 ntBASIC2.39□□□□□ -2.03
Trim56Q80VI1 Mir7016-201ENSMUST00000184308 72 ntBASIC2.39□□□□□ -2.03
Trim56Q80VI1 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC2.39□□□□□ -2.03
Trim56Q80VI1 Mir151-201ENSMUST00000083678 68 ntBASIC2.39□□□□□ -2.03
Trim56Q80VI1 Gm22866-201ENSMUST00000083947 177 ntBASIC2.39□□□□□ -2.03
Trim56Q80VI1 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.39□□□□□ -2.03
Trim56Q80VI1 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.38□□□□□ -2.03
Trim56Q80VI1 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.38□□□□□ -2.03
Trim56Q80VI1 Gm25460-201ENSMUST00000157954 127 ntBASIC2.38□□□□□ -2.03
Trim56Q80VI1 Mir6997-201ENSMUST00000184313 71 ntBASIC2.38□□□□□ -2.03
Trim56Q80VI1 Gm22251-201ENSMUST00000083216 107 ntBASIC2.38□□□□□ -2.03
Trim56Q80VI1 Mir451a-201ENSMUST00000093557 72 ntBASIC2.38□□□□□ -2.03
Trim56Q80VI1 Gm26077-201ENSMUST00000104064 123 ntBASIC2.37□□□□□ -2.03
Trim56Q80VI1 Gm26213-201ENSMUST00000158582 110 ntBASIC2.37□□□□□ -2.03
Trim56Q80VI1 Gm25241-201ENSMUST00000174909 84 ntBASIC2.37□□□□□ -2.03
Trim56Q80VI1 Gm26217-201ENSMUST00000175212 84 ntBASIC2.37□□□□□ -2.03
Trim56Q80VI1 Mir7226-201ENSMUST00000184953 60 ntBASIC2.37□□□□□ -2.03
Trim56Q80VI1 Gm27959-201ENSMUST00000185172 111 ntBASIC2.37□□□□□ -2.03
Trim56Q80VI1 mt-Tv-201ENSMUST00000082389 69 ntBASIC2.37□□□□□ -2.03
Trim56Q80VI1 Snora41-201ENSMUST00000082668 132 ntBASIC2.37□□□□□ -2.03
Trim56Q80VI1 Gm23377-201ENSMUST00000082943 126 ntBASIC2.37□□□□□ -2.03
Trim56Q80VI1 Mir93-201ENSMUST00000083593 88 ntBASIC2.37□□□□□ -2.03
Trim56Q80VI1 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Trim56Q80VI1 Mir1949-201ENSMUST00000157434 141 ntBASIC2.36□□□□□ -2.03
Trim56Q80VI1 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.36□□□□□ -2.03
Trim56Q80VI1 Gm22884-201ENSMUST00000083127 140 ntBASIC2.36□□□□□ -2.03
Trim56Q80VI1 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.35□□□□□ -2.03
Trim56Q80VI1 Gm22815-201ENSMUST00000157451 62 ntBASIC2.35□□□□□ -2.03
Trim56Q80VI1 Gm22554-201ENSMUST00000157798 147 ntBASIC2.35□□□□□ -2.03
Trim56Q80VI1 Gm25750-201ENSMUST00000175483 112 ntBASIC2.35□□□□□ -2.03
Trim56Q80VI1 Mir7683-201ENSMUST00000183842 61 ntBASIC2.35□□□□□ -2.03
Trim56Q80VI1 Gm44932-201ENSMUST00000206799 121 ntBASIC2.35□□□□□ -2.03
Trim56Q80VI1 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Trim56Q80VI1 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trim56Q80VI1 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Trim56Q80VI1 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trim56Q80VI1 Gm25610-201ENSMUST00000104016 129 ntBASIC2.34□□□□□ -2.03
Trim56Q80VI1 Gm25611-201ENSMUST00000104017 133 ntBASIC2.34□□□□□ -2.03
Trim56Q80VI1 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.34□□□□□ -2.03
Trim56Q80VI1 Gm25994-201ENSMUST00000175392 101 ntBASIC2.34□□□□□ -2.03
Trim56Q80VI1 Gm23951-201ENSMUST00000104029 132 ntBASIC2.33□□□□□ -2.04
Trim56Q80VI1 Snord78-201ENSMUST00000104032 66 ntBASIC2.33□□□□□ -2.04
Trim56Q80VI1 Gm22772-201ENSMUST00000104451 121 ntBASIC2.33□□□□□ -2.04
Trim56Q80VI1 Gm6444-201ENSMUST00000119611 458 ntBASIC2.33□□□□□ -2.04
Trim56Q80VI1 Traj61-201ENSMUST00000165025 72 ntBASIC2.33□□□□□ -2.04
Trim56Q80VI1 Gm37557-201ENSMUST00000191640 139 ntBASIC2.33□□□□□ -2.04
Trim56Q80VI1 Gm24044-201ENSMUST00000083107 156 ntBASIC2.33□□□□□ -2.04
Trim56Q80VI1 Mir107-201ENSMUST00000083660 87 ntBASIC2.33□□□□□ -2.04
Trim56Q80VI1 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Trim56Q80VI1 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trim56Q80VI1 Gm23950-201ENSMUST00000104026 129 ntBASIC2.32□□□□□ -2.04
Trim56Q80VI1 Gm24947-201ENSMUST00000158334 110 ntBASIC2.32□□□□□ -2.04
Trim56Q80VI1 Gm44308-201ENSMUST00000197080 99 ntBASIC2.32□□□□□ -2.04
Trim56Q80VI1 Gm45471-201ENSMUST00000211270 281 ntBASIC2.32□□□□□ -2.04
Trim56Q80VI1 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.32□□□□□ -2.04
Trim56Q80VI1 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trim56Q80VI1 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC2.32□□□□□ -2.04
Trim56Q80VI1 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.31□□□□□ -2.04
Trim56Q80VI1 Gm24649-201ENSMUST00000157106 134 ntBASIC2.31□□□□□ -2.04
Trim56Q80VI1 Mir3569-201ENSMUST00000185080 58 ntBASIC2.31□□□□□ -2.04
Trim56Q80VI1 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC2.31□□□□□ -2.04
Trim56Q80VI1 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.31□□□□□ -2.04
Trim56Q80VI1 Gm23038-201ENSMUST00000083873 104 ntBASIC2.31□□□□□ -2.04
Trim56Q80VI1 Gm24523-201ENSMUST00000083965 132 ntBASIC2.31□□□□□ -2.04
Trim56Q80VI1 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trim56Q80VI1 Gm14674-201ENSMUST00000117816 342 ntBASIC2.3□□□□□ -2.04
Trim56Q80VI1 Gm25113-201ENSMUST00000157185 143 ntBASIC2.3□□□□□ -2.04
Trim56Q80VI1 Gm22727-201ENSMUST00000158090 116 ntBASIC2.3□□□□□ -2.04
Trim56Q80VI1 Mir6419-201ENSMUST00000184784 113 ntBASIC2.3□□□□□ -2.04
Trim56Q80VI1 Gm25887-201ENSMUST00000157777 84 ntBASIC2.29□□□□□ -2.04
Trim56Q80VI1 Mir6379-201ENSMUST00000183392 115 ntBASIC2.29□□□□□ -2.04
Trim56Q80VI1 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.29□□□□□ -2.04
Trim56Q80VI1 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.29□□□□□ -2.04
Trim56Q80VI1 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC2.29□□□□□ -2.04
Trim56Q80VI1 Gm26123-201ENSMUST00000083363 135 ntBASIC2.29□□□□□ -2.04
Trim56Q80VI1 Gm23208-201ENSMUST00000158666 127 ntBASIC2.28□□□□□ -2.04
Trim56Q80VI1 Gm25949-201ENSMUST00000175333 114 ntBASIC2.28□□□□□ -2.04
Trim56Q80VI1 Gm23375-201ENSMUST00000175407 83 ntBASIC2.28□□□□□ -2.04
Trim56Q80VI1 Gm42795-201ENSMUST00000198847 76 ntBASIC2.28□□□□□ -2.04
Trim56Q80VI1 Mir7217-201ENSMUST00000200304 62 ntBASIC2.28□□□□□ -2.04
Trim56Q80VI1 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.28□□□□□ -2.04
Trim56Q80VI1 Gm24412-201ENSMUST00000083426 109 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 182.4 ms