Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-0.54□□□□□ -2.5
Trav8d-1Q5R1H8 Mir759-201ENSMUST00000103254 98 ntBASIC-0.55□□□□□ -2.5
Trav8d-1Q5R1H8 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
Trav8d-1Q5R1H8 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.55□□□□□ -2.5
Trav8d-1Q5R1H8 Gm25828-201ENSMUST00000157087 95 ntBASIC-0.55□□□□□ -2.5
Trav8d-1Q5R1H8 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.55□□□□□ -2.5
Trav8d-1Q5R1H8 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.55□□□□□ -2.5
Trav8d-1Q5R1H8 Gm25615-201ENSMUST00000177836 94 ntBASIC-0.55□□□□□ -2.5
Trav8d-1Q5R1H8 Gm43238-201ENSMUST00000196463 359 ntBASIC-0.55□□□□□ -2.5
Trav8d-1Q5R1H8 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.55□□□□□ -2.5
Trav8d-1Q5R1H8 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.55□□□□□ -2.5
Trav8d-1Q5R1H8 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.55□□□□□ -2.5
Trav8d-1Q5R1H8 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.55□□□□□ -2.5
Trav8d-1Q5R1H8 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.55□□□□□ -2.5
Trav8d-1Q5R1H8 Gm23614-201ENSMUST00000082598 107 ntBASIC-0.55□□□□□ -2.5
Trav8d-1Q5R1H8 Gm24150-201ENSMUST00000082759 104 ntBASIC-0.55□□□□□ -2.5
Trav8d-1Q5R1H8 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.56□□□□□ -2.5
Trav8d-1Q5R1H8 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC-0.56□□□□□ -2.5
Trav8d-1Q5R1H8 Gm26482-201ENSMUST00000158015 62 ntBASIC-0.56□□□□□ -2.5
Trav8d-1Q5R1H8 Gm23262-201ENSMUST00000158323 168 ntBASIC-0.56□□□□□ -2.5
Trav8d-1Q5R1H8 Gm28849-201ENSMUST00000188127 174 ntBASIC-0.56□□□□□ -2.5
Trav8d-1Q5R1H8 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.56□□□□□ -2.5
Trav8d-1Q5R1H8 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.56□□□□□ -2.5
Trav8d-1Q5R1H8 Mir327-201ENSMUST00000199328 69 ntBASIC-0.56□□□□□ -2.5
Trav8d-1Q5R1H8 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.56□□□□□ -2.5
Trav8d-1Q5R1H8 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC-0.56□□□□□ -2.5
Trav8d-1Q5R1H8 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.56□□□□□ -2.5
Trav8d-1Q5R1H8 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.56□□□□□ -2.5
Trav8d-1Q5R1H8 Gm11834-201ENSMUST00000122257 585 ntBASIC-0.57□□□□□ -2.5
Trav8d-1Q5R1H8 Gm25102-201ENSMUST00000122479 112 ntBASIC-0.57□□□□□ -2.5
Trav8d-1Q5R1H8 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.57□□□□□ -2.5
Trav8d-1Q5R1H8 AC159896.1-201ENSMUST00000215264 215 ntBASIC-0.57□□□□□ -2.5
Trav8d-1Q5R1H8 Gm7240-201ENSMUST00000220769 664 ntBASIC-0.57□□□□□ -2.5
Trav8d-1Q5R1H8 Gm25929-201ENSMUST00000082784 107 ntBASIC-0.57□□□□□ -2.5
Trav8d-1Q5R1H8 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.58□□□□□ -2.5
Trav8d-1Q5R1H8 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.58□□□□□ -2.5
Trav8d-1Q5R1H8 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.58□□□□□ -2.5
Trav8d-1Q5R1H8 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.58□□□□□ -2.5
Trav8d-1Q5R1H8 Gm27755-201ENSMUST00000184623 132 ntBASIC-0.58□□□□□ -2.5
Trav8d-1Q5R1H8 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC-0.58□□□□□ -2.5
Trav8d-1Q5R1H8 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.58□□□□□ -2.5
Trav8d-1Q5R1H8 Gm25323-201ENSMUST00000122555 103 ntBASIC-0.59□□□□□ -2.5
Trav8d-1Q5R1H8 Gm25771-201ENSMUST00000158565 144 ntBASIC-0.59□□□□□ -2.5
Trav8d-1Q5R1H8 Gm27539-201ENSMUST00000184971 224 ntBASIC-0.59□□□□□ -2.5
Trav8d-1Q5R1H8 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.59□□□□□ -2.5
Trav8d-1Q5R1H8 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.6□□□□□ -2.51
Trav8d-1Q5R1H8 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-0.6□□□□□ -2.51
Trav8d-1Q5R1H8 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.6□□□□□ -2.51
Trav8d-1Q5R1H8 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.6□□□□□ -2.51
Trav8d-1Q5R1H8 AC131720.2-201ENSMUST00000220420 431 ntBASIC-0.6□□□□□ -2.51
Trav8d-1Q5R1H8 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.6□□□□□ -2.51
Trav8d-1Q5R1H8 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
Trav8d-1Q5R1H8 Gm25142-201ENSMUST00000082698 107 ntBASIC-0.6□□□□□ -2.51
Trav8d-1Q5R1H8 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.61□□□□□ -2.51
Trav8d-1Q5R1H8 Gm15030-201ENSMUST00000119804 484 ntBASIC-0.61□□□□□ -2.51
Trav8d-1Q5R1H8 Gm23779-201ENSMUST00000157938 64 ntBASIC-0.61□□□□□ -2.51
Trav8d-1Q5R1H8 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.62□□□□□ -2.51
Trav8d-1Q5R1H8 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.62□□□□□ -2.51
Trav8d-1Q5R1H8 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.62□□□□□ -2.51
Trav8d-1Q5R1H8 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC-0.62□□□□□ -2.51
Trav8d-1Q5R1H8 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.62□□□□□ -2.51
Trav8d-1Q5R1H8 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.62□□□□□ -2.51
Trav8d-1Q5R1H8 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.62□□□□□ -2.51
Trav8d-1Q5R1H8 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.62□□□□□ -2.51
Trav8d-1Q5R1H8 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-0.62□□□□□ -2.51
Trav8d-1Q5R1H8 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.62□□□□□ -2.51
Trav8d-1Q5R1H8 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.62□□□□□ -2.51
Trav8d-1Q5R1H8 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.63□□□□□ -2.51
Trav8d-1Q5R1H8 Gm25827-201ENSMUST00000157089 107 ntBASIC-0.63□□□□□ -2.51
Trav8d-1Q5R1H8 Gm23793-201ENSMUST00000179396 117 ntBASIC-0.63□□□□□ -2.51
Trav8d-1Q5R1H8 Gm38050-201ENSMUST00000191904 238 ntBASIC-0.63□□□□□ -2.51
Trav8d-1Q5R1H8 Gm43624-201ENSMUST00000197368 180 ntBASIC-0.63□□□□□ -2.51
Trav8d-1Q5R1H8 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.63□□□□□ -2.51
Trav8d-1Q5R1H8 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.63□□□□□ -2.51
Trav8d-1Q5R1H8 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.63□□□□□ -2.51
Trav8d-1Q5R1H8 Gm25937-201ENSMUST00000083912 107 ntBASIC-0.63□□□□□ -2.51
Trav8d-1Q5R1H8 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
Trav8d-1Q5R1H8 Gm14307-201ENSMUST00000118930 291 ntBASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 Gm23655-201ENSMUST00000122627 105 ntBASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 Gm14297-201ENSMUST00000129110 291 ntBASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 Gm16362-201ENSMUST00000135189 214 ntBASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 CT025526.1-201ENSMUST00000217327 267 ntBASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 AC159619.2-201ENSMUST00000222924 401 ntBASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 Rny3-201ENSMUST00000083011 102 ntBASIC-0.64□□□□□ -2.51
Trav8d-1Q5R1H8 Gm14301-201ENSMUST00000120181 324 ntBASIC-0.65□□□□□ -2.51
Trav8d-1Q5R1H8 Gm13345-201ENSMUST00000121928 228 ntBASIC-0.65□□□□□ -2.51
Trav8d-1Q5R1H8 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 172.1 ms